RNA–Protein interactions for RNA: ENST00000452375.5

COPS7B-216, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 4

Gene COPS7B, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-216ENST00000452375 MOXD2PA6NHM9 499 aa12.75□□□□□ -0.37
COPS7B-216ENST00000452375 MS4A1P11836 297 aa12.75□□□□□ -0.37
COPS7B-216ENST00000452375 WIZO95785 1651 aa12.73□□□□□ -0.37
COPS7B-216ENST00000452375 CCNYL3P0C7X3 344 aa12.73□□□□□ -0.37
COPS7B-216ENST00000452375 LINC01559Q495D7 138 aa12.73□□□□□ -0.37
COPS7B-216ENST00000452375 CFTRP13569 1480 aa12.72□□□□□ -0.37
COPS7B-216ENST00000452375 GIGYF2Q6Y7W6 1299 aaKnown RBP12.72□□□□□ -0.37
COPS7B-216ENST00000452375 ZNF608Q9ULD9 1512 aaPredicted RBP12.72□□□□□ -0.37
COPS7B-216ENST00000452375 BARGINQ6ZT62 677 aa12.71□□□□□ -0.37
COPS7B-216ENST00000452375 TRIM47Q96LD4 638 aa12.71□□□□□ -0.37
COPS7B-216ENST00000452375 SH3BP2P78314 561 aa12.7□□□□□ -0.38
COPS7B-216ENST00000452375 NFX1Q12986 1120 aaKnown RBP12.7□□□□□ -0.38
COPS7B-216ENST00000452375 PRR7Q8TB68 274 aa12.7□□□□□ -0.38
COPS7B-216ENST00000452375 ZC3H15Q8WU90 426 aaKnown RBP12.7□□□□□ -0.38
COPS7B-216ENST00000452375 SENP2Q9HC62 589 aa12.7□□□□□ -0.38
COPS7B-216ENST00000452375 WASF2Q9Y6W5 498 aa12.7□□□□□ -0.38
COPS7B-216ENST00000452375 ZMYND10O75800 440 aa12.69□□□□□ -0.38
COPS7B-216ENST00000452375 ARAP1Q96P48 1450 aa12.68□□□□□ -0.38
COPS7B-216ENST00000452375 BMP1P13497 986 aa12.68□□□□□ -0.38
COPS7B-216ENST00000452375 BEGAINQ9BUH8 593 aa12.68□□□□□ -0.38
COPS7B-216ENST00000452375 UNC93B1Q9H1C4 597 aa12.68□□□□□ -0.38
COPS7B-216ENST00000452375 SIAH2O43255 324 aa12.67□□□□□ -0.38
COPS7B-216ENST00000452375 PTPRNQ16849 979 aa12.67□□□□□ -0.38
COPS7B-216ENST00000452375 BAP1Q92560 729 aa12.67□□□□□ -0.38
COPS7B-216ENST00000452375 MTMR2Q13614 643 aa12.66□□□□□ -0.38
COPS7B-216ENST00000452375 AMHR2Q16671 573 aa12.65□□□□□ -0.38
COPS7B-216ENST00000452375 TLL2Q9Y6L7 1015 aa12.65□□□□□ -0.38
COPS7B-216ENST00000452375 EVA1BQ9NVM1 165 aa12.64□□□□□ -0.39
COPS7B-216ENST00000452375 TERTO14746 1132 aaKnown RBP12.63□□□□□ -0.39
COPS7B-216ENST00000452375 CAPN5O15484 640 aaPredicted RBP12.63□□□□□ -0.39
COPS7B-216ENST00000452375 KCNH2Q12809 1159 aa12.63□□□□□ -0.39
COPS7B-216ENST00000452375 KIFC2Q96AC6 838 aa12.63□□□□□ -0.39
COPS7B-216ENST00000452375 TBC1D2Q9BYX2 928 aa12.63□□□□□ -0.39
COPS7B-216ENST00000452375 IFT140Q96RY7 1462 aa12.63□□□□□ -0.39
COPS7B-216ENST00000452375 CTHP32929 405 aa12.61□□□□□ -0.39
COPS7B-216ENST00000452375 LCE2CQ5TA81 110 aa12.61□□□□□ -0.39
COPS7B-216ENST00000452375 TRIM46Q7Z4K8 759 aa12.6□□□□□ -0.39
COPS7B-216ENST00000452375 PARP9Q8IXQ6 854 aa12.6□□□□□ -0.39
COPS7B-216ENST00000452375 PCDHB15Q9Y5E8 787 aa12.6□□□□□ -0.39
COPS7B-216ENST00000452375 CSPP1Q1MSJ5 1256 aa12.59□□□□□ -0.39
COPS7B-216ENST00000452375 ZNF511Q8NB15 262 aa12.59□□□□□ -0.39
COPS7B-216ENST00000452375 CHD1O14646 1710 aa12.59□□□□□ -0.39
COPS7B-216ENST00000452375 EIF4G3O43432 1585 aaKnown RBP12.58□□□□□ -0.4
COPS7B-216ENST00000452375 RSBN1LQ6PCB5 846 aaPredicted RBP12.58□□□□□ -0.4
COPS7B-216ENST00000452375 SPDYE5A6NIY4 337 aa12.57□□□□□ -0.4
COPS7B-216ENST00000452375 CFAP99D6REC4 459 aa12.56□□□□□ -0.4
COPS7B-216ENST00000452375 RSF1Q96T23 1441 aaPredicted RBP12.55□□□□□ -0.4
COPS7B-216ENST00000452375 TRIM66O15016 1216 aa12.55□□□□□ -0.4
COPS7B-216ENST00000452375 VEGFBP49765 207 aa12.54□□□□□ -0.4
COPS7B-216ENST00000452375 NNTQ13423 1086 aa12.54□□□□□ -0.4
COPS7B-216ENST00000452375 DESI1Q6ICB0 168 aa12.54□□□□□ -0.4
COPS7B-216ENST00000452375 CABLES1Q8TDN4 633 aa12.54□□□□□ -0.4
COPS7B-216ENST00000452375 TSC1Q92574 1164 aa12.54□□□□□ -0.4
COPS7B-216ENST00000452375 MAP10Q9P2G4 905 aa12.54□□□□□ -0.4
COPS7B-216ENST00000452375 TOPBP1Q92547 1522 aa12.53□□□□□ -0.4
COPS7B-216ENST00000452375 WIPF1O43516 503 aa12.53□□□□□ -0.4
COPS7B-216ENST00000452375 HRCP23327 699 aa12.53□□□□□ -0.4
COPS7B-216ENST00000452375 VARSP26640 1264 aaKnown RBP12.53□□□□□ -0.4
COPS7B-216ENST00000452375 PRDM2Q13029 1718 aa12.53□□□□□ -0.4
COPS7B-216ENST00000452375 AQRO60306 1485 aaKnown RBP eCLIP12.53□□□□□ -0.4
COPS7B-216ENST00000452375 INSM1Q01101 510 aaPredicted RBP12.52□□□□□ -0.41
COPS7B-216ENST00000452375 ARID5BQ14865 1188 aa12.52□□□□□ -0.41
COPS7B-216ENST00000452375 LYPD8Q6UX82 237 aa12.52□□□□□ -0.41
COPS7B-216ENST00000452375 ZBTB3Q9H5J0 574 aa12.52□□□□□ -0.41
COPS7B-216ENST00000452375 PLEKHG3A1L390 1219 aa12.51□□□□□ -0.41
COPS7B-216ENST00000452375 DIXDC1Q155Q3 683 aa12.51□□□□□ -0.41
COPS7B-216ENST00000452375 RIC3Q7Z5B4 369 aa12.51□□□□□ -0.41
COPS7B-216ENST00000452375 FOXJ1Q92949 421 aa12.51□□□□□ -0.41
COPS7B-216ENST00000452375 ZFP42Q96MM3 310 aa12.51□□□□□ -0.41
COPS7B-216ENST00000452375 TOP2AP11388 1531 aaKnown RBP12.51□□□□□ -0.41
COPS7B-216ENST00000452375 SPTLC1O15269 473 aa12.5□□□□□ -0.41
COPS7B-216ENST00000452375 NXF1Q9UBU9 619 aaKnown RBP12.5□□□□□ -0.41
COPS7B-216ENST00000452375 SLC16A10Q8TF71 515 aa12.49□□□□□ -0.41
COPS7B-216ENST00000452375 AK7Q96M32 723 aa12.49□□□□□ -0.41
COPS7B-216ENST00000452375 WDR4P57081 412 aaKnown RBP12.48□□□□□ -0.41
COPS7B-216ENST00000452375 AGERQ15109 404 aa12.48□□□□□ -0.41
COPS7B-216ENST00000452375 STK17AQ9UEE5 414 aa12.48□□□□□ -0.41
COPS7B-216ENST00000452375 PER1O15534 1290 aaPredicted RBP12.47□□□□□ -0.41
COPS7B-216ENST00000452375 GJA5P36382 358 aa12.47□□□□□ -0.41
COPS7B-216ENST00000452375 FAM174AQ8TBP5 190 aa12.47□□□□□ -0.41
COPS7B-216ENST00000452375 PURBQ96QR8 312 aaKnown RBP12.47□□□□□ -0.41
COPS7B-216ENST00000452375 TARBP1Q13395 1621 aaKnown RBP12.47□□□□□ -0.41
COPS7B-216ENST00000452375 NUTM2BA6NNL0 878 aaPredicted RBP12.45□□□□□ -0.42
COPS7B-216ENST00000452375 NUTM2EB1AL46 878 aaPredicted RBP12.45□□□□□ -0.42
COPS7B-216ENST00000452375 F12P00748 615 aaPredicted RBP12.45□□□□□ -0.42
COPS7B-216ENST00000452375 TIMP2P16035 220 aa12.45□□□□□ -0.42
COPS7B-216ENST00000452375 NUTM2DQ5VT03 806 aaPredicted RBP12.45□□□□□ -0.42
COPS7B-216ENST00000452375 MRPL14Q6P1L8 145 aaKnown RBP12.45□□□□□ -0.42
COPS7B-216ENST00000452375 NUTM2AQ8IVF1 878 aaPredicted RBP12.45□□□□□ -0.42
COPS7B-216ENST00000452375 LIMD1Q9UGP4 676 aa12.45□□□□□ -0.42
COPS7B-216ENST00000452375 SOBPA7XYQ1 873 aa12.44□□□□□ -0.42
COPS7B-216ENST00000452375 ADH1CP00326 375 aa12.44□□□□□ -0.42
COPS7B-216ENST00000452375 QPCTQ16769 361 aa12.44□□□□□ -0.42
COPS7B-216ENST00000452375 CLASP1Q7Z460 1538 aa12.43□□□□□ -0.42
COPS7B-216ENST00000452375 GMPRP36959 345 aa12.43□□□□□ -0.42
COPS7B-216ENST00000452375 DNMBPQ6XZF7 1577 aa12.43□□□□□ -0.42
COPS7B-216ENST00000452375 PDE4DQ08499 809 aa12.42□□□□□ -0.42
COPS7B-216ENST00000452375 SCARF1Q14162 830 aa12.42□□□□□ -0.42
COPS7B-216ENST00000452375 PRPF38BQ5VTL8 546 aaKnown RBP12.42□□□□□ -0.42
COPS7B-216ENST00000452375 MYSM1Q5VVJ2 828 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms