RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 CABLES1Q8TDN4 633 aa15.97■□□□□ 0.15
USP1-204ENST00000452143 DCAF11Q8TEB1 546 aa15.97■□□□□ 0.15
USP1-204ENST00000452143 LMOD2Q6P5Q4 547 aa15.96■□□□□ 0.15
USP1-204ENST00000452143 ZRANB1Q9UGI0 708 aa15.96■□□□□ 0.15
USP1-204ENST00000452143 ATP7BP35670 1465 aa15.96■□□□□ 0.14
USP1-204ENST00000452143 TOPAZ1Q8N9V7 1692 aa15.95■□□□□ 0.14
USP1-204ENST00000452143 MINK1Q8N4C8 1332 aaPredicted RBP15.95■□□□□ 0.14
USP1-204ENST00000452143 PRR36Q9H6K5 1346 aa15.95■□□□□ 0.14
USP1-204ENST00000452143 WASLO00401 505 aaPredicted RBP15.95■□□□□ 0.14
USP1-204ENST00000452143 HIRIP3Q9BW71 556 aaPredicted RBP15.95■□□□□ 0.14
USP1-204ENST00000452143 ONECUT3O60422 494 aaPredicted RBP15.94■□□□□ 0.14
USP1-204ENST00000452143 PHRF1Q9P1Y6 1649 aaKnown RBP15.94■□□□□ 0.14
USP1-204ENST00000452143 SEPT12Q8IYM1 358 aa15.93■□□□□ 0.14
USP1-204ENST00000452143 KDM2AQ9Y2K7 1162 aa15.93■□□□□ 0.14
USP1-204ENST00000452143 FAM83GA6ND36 823 aa15.91■□□□□ 0.14
USP1-204ENST00000452143 CCDC9Q9Y3X0 531 aaKnown RBP15.91■□□□□ 0.14
USP1-204ENST00000452143 THSD7AQ9UPZ6 1657 aa15.9■□□□□ 0.14
USP1-204ENST00000452143 PLEKHG5O94827 1062 aa15.9■□□□□ 0.14
USP1-204ENST00000452143 RGPD1P0DJD0 1748 aa15.9■□□□□ 0.14
USP1-204ENST00000452143 SF3B2Q13435 895 aaKnown RBP15.89■□□□□ 0.13
USP1-204ENST00000452143 KRT27Q7Z3Y8 459 aa15.89■□□□□ 0.13
USP1-204ENST00000452143 NGDNQ8NEJ9 315 aaKnown RBP15.89■□□□□ 0.13
USP1-204ENST00000452143 BTG4Q9NY30 223 aa15.89■□□□□ 0.13
USP1-204ENST00000452143 POLR3AO14802 1390 aaPredicted RBP15.87■□□□□ 0.13
USP1-204ENST00000452143 NRKQ7Z2Y5 1582 aa15.86■□□□□ 0.13
USP1-204ENST00000452143 LRP5O75197 1615 aa15.86■□□□□ 0.13
USP1-204ENST00000452143 A0A0G2JS52 829 aa15.85■□□□□ 0.13
USP1-204ENST00000452143 PAK3O75914 559 aaPredicted RBP15.85■□□□□ 0.13
USP1-204ENST00000452143 MYT1Q01538 1121 aa15.85■□□□□ 0.13
USP1-204ENST00000452143 NUDT16Q96DE0 195 aaKnown RBP15.85■□□□□ 0.13
USP1-204ENST00000452143 SPATA31A5Q5VU36 1347 aa15.85■□□□□ 0.13
USP1-204ENST00000452143 SPATA31A7Q8IWB4 1347 aa15.85■□□□□ 0.13
USP1-204ENST00000452143 TNS1Q9HBL0 1735 aaKnown RBP15.85■□□□□ 0.13
USP1-204ENST00000452143 FAM98CQ17RN3 349 aaKnown RBP15.84■□□□□ 0.13
USP1-204ENST00000452143 DEFB132Q7Z7B7 95 aa15.84■□□□□ 0.13
USP1-204ENST00000452143 PRDM11Q9NQV5 511 aa15.84■□□□□ 0.13
USP1-204ENST00000452143 QRICH2Q9H0J4 1663 aa15.83■□□□□ 0.13
USP1-204ENST00000452143 KIAA0232Q92628 1395 aa15.83■□□□□ 0.12
USP1-204ENST00000452143 CDK19Q9BWU1 502 aa15.82■□□□□ 0.12
USP1-204ENST00000452143 CCDC61Q9Y6R9 512 aa15.82■□□□□ 0.12
USP1-204ENST00000452143 DISP2A7MBM2 1401 aa15.81■□□□□ 0.12
USP1-204ENST00000452143 BAG6P46379 1132 aa15.81■□□□□ 0.12
USP1-204ENST00000452143 LMO7Q8WWI1 1683 aa15.81■□□□□ 0.12
USP1-204ENST00000452143 ACEP12821 1306 aa15.79■□□□□ 0.12
USP1-204ENST00000452143 SPATA31A1Q5TZJ5 1347 aa15.79■□□□□ 0.12
USP1-204ENST00000452143 PLEKHG3A1L390 1219 aa15.79■□□□□ 0.12
USP1-204ENST00000452143 BRD4O60885 1362 aaPredicted RBP15.78■□□□□ 0.12
USP1-204ENST00000452143 CPDO75976 1380 aa15.78■□□□□ 0.12
USP1-204ENST00000452143 NBPF8Q3BBV2 869 aa15.78■□□□□ 0.12
USP1-204ENST00000452143 PPIP5K1Q6PFW1 1433 aa15.77■□□□□ 0.12
USP1-204ENST00000452143 SSH2Q76I76 1423 aa15.77■□□□□ 0.12
USP1-204ENST00000452143 USP19O94966 1318 aa15.77■□□□□ 0.12
USP1-204ENST00000452143 CENPJQ9HC77 1338 aaPredicted RBP15.77■□□□□ 0.12
USP1-204ENST00000452143 TRPM1Q7Z4N2 1603 aa15.76■□□□□ 0.11
USP1-204ENST00000452143 CAMTA1Q9Y6Y1 1673 aa15.76■□□□□ 0.11
USP1-204ENST00000452143 PARP4Q9UKK3 1724 aaKnown RBP15.75■□□□□ 0.11
USP1-204ENST00000452143 CHRNA2Q15822 529 aa15.75■□□□□ 0.11
USP1-204ENST00000452143 NBPF1Q3BBV0 1214 aa15.75■□□□□ 0.11
USP1-204ENST00000452143 ZC3H6P61129 1189 aaKnown RBP15.74■□□□□ 0.11
USP1-204ENST00000452143 SRPK2P78362 688 aaKnown RBP15.74■□□□□ 0.11
USP1-204ENST00000452143 ABTB2Q8N961 1025 aa15.74■□□□□ 0.11
USP1-204ENST00000452143 STRN4Q9NRL3 753 aa15.74■□□□□ 0.11
USP1-204ENST00000452143 NUTM2GQ5VZR2 741 aa15.73■□□□□ 0.11
USP1-204ENST00000452143 BARGINQ6ZT62 677 aa15.73■□□□□ 0.11
USP1-204ENST00000452143 PARD3Q8TEW0 1356 aa15.73■□□□□ 0.11
USP1-204ENST00000452143 SLIT3O75094 1523 aa15.73■□□□□ 0.11
USP1-204ENST00000452143 RREB1Q92766 1687 aa15.73■□□□□ 0.11
USP1-204ENST00000452143 USP6P35125 1406 aa15.72■□□□□ 0.11
USP1-204ENST00000452143 FAM196AQ6ZSG2 479 aa15.72■□□□□ 0.11
USP1-204ENST00000452143 NLRP13Q86W25 1043 aa15.72■□□□□ 0.11
USP1-204ENST00000452143 PIK3C2AO00443 1686 aa15.72■□□□□ 0.11
USP1-204ENST00000452143 COL5A2P05997 1499 aaPredicted RBP15.71■□□□□ 0.11
USP1-204ENST00000452143 EN1Q05925 392 aaPredicted RBP15.71■□□□□ 0.11
USP1-204ENST00000452143 FAM182BQ5T319 152 aa15.71■□□□□ 0.11
USP1-204ENST00000452143 AKAP12Q02952 1782 aa15.7■□□□□ 0.1
USP1-204ENST00000452143 EVA1CP58658 441 aa15.7■□□□□ 0.1
USP1-204ENST00000452143 WNK3Q9BYP7 1800 aa15.7■□□□□ 0.1
USP1-204ENST00000452143 NUP188Q5SRE5 1749 aa15.69■□□□□ 0.1
USP1-204ENST00000452143 CABP2Q9NPB3 220 aa15.69■□□□□ 0.1
USP1-204ENST00000452143 THRAP3Q9Y2W1 955 aaKnown RBP15.69■□□□□ 0.1
USP1-204ENST00000452143 CRB1P82279 1406 aa15.68■□□□□ 0.1
USP1-204ENST00000452143 RGPD3A6NKT7 1758 aaPredicted RBP15.68■□□□□ 0.1
USP1-204ENST00000452143 RGPD4Q7Z3J3 1758 aa15.68■□□□□ 0.1
USP1-204ENST00000452143 PSDA5PKW4 1024 aaPredicted RBP15.68■□□□□ 0.1
USP1-204ENST00000452143 GCP02774 474 aa15.68■□□□□ 0.1
USP1-204ENST00000452143 POTEHQ6S545 545 aa15.68■□□□□ 0.1
USP1-204ENST00000452143 TCP11L2Q8N4U5 519 aa15.68■□□□□ 0.1
USP1-204ENST00000452143 USP35Q9P2H5 1018 aa15.68■□□□□ 0.1
USP1-204ENST00000452143 LRRC37A3O60309 1634 aa15.68■□□□□ 0.1
USP1-204ENST00000452143 PDE3BQ13370 1112 aa15.67■□□□□ 0.1
USP1-204ENST00000452143 LARP1Q6PKG0 1096 aaKnown RBP15.67■□□□□ 0.1
USP1-204ENST00000452143 L3MBTL2Q969R5 705 aa15.67■□□□□ 0.1
USP1-204ENST00000452143 COL18A1P39060 1754 aa15.67■□□□□ 0.1
USP1-204ENST00000452143 EVC2Q86UK5 1308 aa15.67■□□□□ 0.1
USP1-204ENST00000452143 PEAK1Q9H792 1746 aa15.66■□□□□ 0.1
USP1-204ENST00000452143 AATKQ6ZMQ8 1374 aa15.66■□□□□ 0.1
USP1-204ENST00000452143 TRIM37O94972 964 aa15.66■□□□□ 0.1
USP1-204ENST00000452143 ROCK2O75116 1388 aaKnown RBP15.65■□□□□ 0.1
USP1-204ENST00000452143 C11orf95C9JLR9 678 aaPredicted RBP15.65■□□□□ 0.1
USP1-204ENST00000452143 EZH2Q15910 746 aaKnown RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms