RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 POM121CA8CG34 1229 aa7.78□□□□□ -1.16
VPS8-211ENST00000452140 IRF5Q13568 498 aa7.78□□□□□ -1.16
VPS8-211ENST00000452140 ADH1BP00325 375 aa7.77□□□□□ -1.17
VPS8-211ENST00000452140 MSS51Q4VC12 460 aa7.77□□□□□ -1.17
VPS8-211ENST00000452140 PDZRN3Q9UPQ7 1066 aa7.77□□□□□ -1.17
VPS8-211ENST00000452140 DXOO77932 396 aaKnown RBP7.76□□□□□ -1.17
VPS8-211ENST00000452140 CTHP32929 405 aa7.76□□□□□ -1.17
VPS8-211ENST00000452140 CCDC82Q8N4S0 544 aa7.76□□□□□ -1.17
VPS8-211ENST00000452140 F12P00748 615 aaPredicted RBP7.75□□□□□ -1.17
VPS8-211ENST00000452140 PTPRNQ16849 979 aa7.75□□□□□ -1.17
VPS8-211ENST00000452140 WWC1Q8IX03 1113 aa7.75□□□□□ -1.17
VPS8-211ENST00000452140 NUDT12Q9BQG2 462 aa7.75□□□□□ -1.17
VPS8-211ENST00000452140 CCNYL3P0C7X3 344 aa7.74□□□□□ -1.17
VPS8-211ENST00000452140 MMP16P51512 607 aa7.74□□□□□ -1.17
VPS8-211ENST00000452140 VAC14Q08AM6 782 aa7.74□□□□□ -1.17
VPS8-211ENST00000452140 LCE2BO14633 110 aa7.73□□□□□ -1.17
VPS8-211ENST00000452140 S1PR4O95977 384 aa7.73□□□□□ -1.17
VPS8-211ENST00000452140 CCDC24Q8N4L8 307 aa7.73□□□□□ -1.17
VPS8-211ENST00000452140 SLC6A16Q9GZN6 736 aa7.73□□□□□ -1.17
VPS8-211ENST00000452140 RNF223E7ERA6 249 aa7.72□□□□□ -1.17
VPS8-211ENST00000452140 GLMNQ92990 594 aa7.72□□□□□ -1.17
VPS8-211ENST00000452140 SLC19A1P41440 591 aa7.71□□□□□ -1.18
VPS8-211ENST00000452140 ANKLE1Q8NAG6 615 aa7.71□□□□□ -1.18
VPS8-211ENST00000452140 FKBPLQ9UIM3 349 aa7.71□□□□□ -1.18
VPS8-211ENST00000452140 KCNH2Q12809 1159 aa7.7□□□□□ -1.18
VPS8-211ENST00000452140 ADAMTS19Q8TE59 1207 aa7.7□□□□□ -1.18
VPS8-211ENST00000452140 CALR3Q96L12 384 aaKnown RBP7.7□□□□□ -1.18
VPS8-211ENST00000452140 EVA1BQ9NVM1 165 aa7.7□□□□□ -1.18
VPS8-211ENST00000452140 WASHC4Q2M389 1173 aa7.69□□□□□ -1.18
VPS8-211ENST00000452140 PTCRAQ6ISU1 281 aaPredicted RBP7.69□□□□□ -1.18
VPS8-211ENST00000452140 CCDC97Q96F63 343 aaPredicted RBP7.69□□□□□ -1.18
VPS8-211ENST00000452140 PPEF1O14829 653 aaPredicted RBP7.68□□□□□ -1.18
VPS8-211ENST00000452140 FBXO45P0C2W1 286 aa7.68□□□□□ -1.18
VPS8-211ENST00000452140 HDGFL1Q5TGJ6 251 aa7.68□□□□□ -1.18
VPS8-211ENST00000452140 ZNF598Q86UK7 904 aaKnown RBP7.68□□□□□ -1.18
VPS8-211ENST00000452140 PNMA1Q8ND90 353 aa7.68□□□□□ -1.18
VPS8-211ENST00000452140 FCF1Q9Y324 198 aaKnown RBP7.68□□□□□ -1.18
VPS8-211ENST00000452140 SPRYD7Q5W111 196 aa7.67□□□□□ -1.18
VPS8-211ENST00000452140 ZNF787Q6DD87 383 aa7.67□□□□□ -1.18
VPS8-211ENST00000452140 ARXQ96QS3 562 aa7.67□□□□□ -1.18
VPS8-211ENST00000452140 UNC93B1Q9H1C4 597 aa7.67□□□□□ -1.18
VPS8-211ENST00000452140 ZBBXA8MT70 800 aa7.65□□□□□ -1.18
VPS8-211ENST00000452140 PRR20EP86478 221 aa7.65□□□□□ -1.18
VPS8-211ENST00000452140 PRR20CP86479 221 aa7.65□□□□□ -1.18
VPS8-211ENST00000452140 PRR20DP86480 221 aa7.65□□□□□ -1.18
VPS8-211ENST00000452140 PRR20BP86481 221 aa7.65□□□□□ -1.18
VPS8-211ENST00000452140 PRR20AP86496 221 aa7.65□□□□□ -1.18
VPS8-211ENST00000452140 NR1H3Q13133 447 aa7.65□□□□□ -1.18
VPS8-211ENST00000452140 PKDCCQ504Y2 493 aa7.65□□□□□ -1.18
VPS8-211ENST00000452140 SERPINA10Q9UK55 444 aa7.65□□□□□ -1.18
VPS8-211ENST00000452140 LINC01559Q495D7 138 aa7.64□□□□□ -1.19
VPS8-211ENST00000452140 TRIM67Q6ZTA4 783 aa7.64□□□□□ -1.19
VPS8-211ENST00000452140 HOMEZQ8IX15 550 aa7.64□□□□□ -1.19
VPS8-211ENST00000452140 ALG2Q9H553 416 aa7.64□□□□□ -1.19
VPS8-211ENST00000452140 ZC3H4Q9UPT8 1303 aaKnown RBP7.63□□□□□ -1.19
VPS8-211ENST00000452140 DGAT1O75907 488 aa7.63□□□□□ -1.19
VPS8-211ENST00000452140 NBPF14Q5TI25 921 aa7.63□□□□□ -1.19
VPS8-211ENST00000452140 ARMC2Q8NEN0 867 aa7.63□□□□□ -1.19
VPS8-211ENST00000452140 EMID1Q96A84 441 aaPredicted RBP7.63□□□□□ -1.19
VPS8-211ENST00000452140 OCSTAMPQ9BR26 566 aa7.63□□□□□ -1.19
VPS8-211ENST00000452140 SEMA3FQ13275 785 aa7.62□□□□□ -1.19
VPS8-211ENST00000452140 ZNF697Q5TEC3 545 aa7.62□□□□□ -1.19
VPS8-211ENST00000452140 BAP1Q92560 729 aa7.62□□□□□ -1.19
VPS8-211ENST00000452140 CARD14Q9BXL6 1004 aa7.62□□□□□ -1.19
VPS8-211ENST00000452140 MAGEB6P1A0A0J9YX57 407 aa7.61□□□□□ -1.19
VPS8-211ENST00000452140 EIF4G2P78344 907 aaKnown RBP eCLIP7.61□□□□□ -1.19
VPS8-211ENST00000452140 PTK2Q05397 1052 aa7.61□□□□□ -1.19
VPS8-211ENST00000452140 PLA2G2CQ5R387 149 aa7.61□□□□□ -1.19
VPS8-211ENST00000452140 PDXDC2PQ6P474 469 aa7.61□□□□□ -1.19
VPS8-211ENST00000452140 LIAT1Q6ZQX7 453 aa7.61□□□□□ -1.19
VPS8-211ENST00000452140 UCN2Q96RP3 112 aa7.61□□□□□ -1.19
VPS8-211ENST00000452140 ARHGAP9Q9BRR9 750 aa7.61□□□□□ -1.19
VPS8-211ENST00000452140 FOXJ1Q92949 421 aa7.6□□□□□ -1.19
VPS8-211ENST00000452140 RFX1P22670 979 aa7.59□□□□□ -1.19
VPS8-211ENST00000452140 SOX11P35716 441 aa7.59□□□□□ -1.19
VPS8-211ENST00000452140 AGERQ15109 404 aa7.59□□□□□ -1.19
VPS8-211ENST00000452140 SH3BP5LQ7L8J4 393 aa7.59□□□□□ -1.19
VPS8-211ENST00000452140 ZNF511Q8NB15 262 aa7.59□□□□□ -1.19
VPS8-211ENST00000452140 ADAM32Q8TC27 787 aa7.59□□□□□ -1.19
VPS8-211ENST00000452140 GPKOWQ92917 476 aaPredicted RBP eCLIP7.59□□□□□ -1.19
VPS8-211ENST00000452140 PCDHB9Q9Y5E1 797 aa7.59□□□□□ -1.19
VPS8-211ENST00000452140 PIK3CDO00329 1044 aa7.58□□□□□ -1.2
VPS8-211ENST00000452140 MYT1Q01538 1121 aa7.58□□□□□ -1.2
VPS8-211ENST00000452140 C4orf48Q5BLP8 95 aa7.58□□□□□ -1.2
VPS8-211ENST00000452140 ZBTB33Q86T24 672 aa7.58□□□□□ -1.2
VPS8-211ENST00000452140 GPSM3Q9Y4H4 160 aa7.58□□□□□ -1.2
VPS8-211ENST00000452140 FAM187AA6NFU0 413 aa7.57□□□□□ -1.2
VPS8-211ENST00000452140 TNFRSF10AO00220 468 aa7.57□□□□□ -1.2
VPS8-211ENST00000452140 GDF9O60383 454 aa7.57□□□□□ -1.2
VPS8-211ENST00000452140 CFAP70Q5T0N1 1121 aa7.57□□□□□ -1.2
VPS8-211ENST00000452140 PPP1R12CQ9BZL4 782 aa7.57□□□□□ -1.2
VPS8-211ENST00000452140 PALM3A6NDB9 673 aaPredicted RBP7.56□□□□□ -1.2
VPS8-211ENST00000452140 ZBTB24O43167 697 aaPredicted RBP7.56□□□□□ -1.2
VPS8-211ENST00000452140 CD2BP2O95400 341 aaKnown RBP7.56□□□□□ -1.2
VPS8-211ENST00000452140 SH3BP2P78314 561 aa7.56□□□□□ -1.2
VPS8-211ENST00000452140 TRIM32Q13049 653 aa7.56□□□□□ -1.2
VPS8-211ENST00000452140 TBC1D9Q6ZT07 1266 aa7.56□□□□□ -1.2
VPS8-211ENST00000452140 SH3RF1Q7Z6J0 888 aa7.56□□□□□ -1.2
VPS8-211ENST00000452140 TFIP11Q9UBB9 837 aaKnown RBP7.56□□□□□ -1.2
VPS8-211ENST00000452140 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms