RNA–Protein interactions for RNA: ENST00000451405.1

RPUSD3-209, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-209ENST00000451405 TRPM3Q9HCF6 1732 aaPredicted RBP23.78■■□□□ 1.4
RPUSD3-209ENST00000451405 ARHGEF10O15013 1369 aa23.78■■□□□ 1.4
RPUSD3-209ENST00000451405 FAM98CQ17RN3 349 aaKnown RBP23.77■■□□□ 1.4
RPUSD3-209ENST00000451405 NGDNQ8NEJ9 315 aaKnown RBP23.77■■□□□ 1.4
RPUSD3-209ENST00000451405 FAM83GA6ND36 823 aa23.76■■□□□ 1.39
RPUSD3-209ENST00000451405 LRP5O75197 1615 aa23.76■■□□□ 1.39
RPUSD3-209ENST00000451405 GPRASP1Q5JY77 1395 aa23.76■■□□□ 1.39
RPUSD3-209ENST00000451405 BRWD3Q6RI45 1802 aa23.75■■□□□ 1.39
RPUSD3-209ENST00000451405 EN1Q05925 392 aaPredicted RBP23.75■■□□□ 1.39
RPUSD3-209ENST00000451405 ABCA3Q99758 1704 aa23.74■■□□□ 1.39
RPUSD3-209ENST00000451405 ATP7BP35670 1465 aa23.74■■□□□ 1.39
RPUSD3-209ENST00000451405 R3HDM1Q15032 1099 aaKnown RBP23.73■■□□□ 1.39
RPUSD3-209ENST00000451405 ALS2Q96Q42 1657 aa23.73■■□□□ 1.39
RPUSD3-209ENST00000451405 PAK3O75914 559 aaPredicted RBP23.72■■□□□ 1.39
RPUSD3-209ENST00000451405 NEUROD1Q13562 356 aa23.72■■□□□ 1.39
RPUSD3-209ENST00000451405 BTG4Q9NY30 223 aa23.71■■□□□ 1.39
RPUSD3-209ENST00000451405 PLCH1Q4KWH8 1693 aa23.68■■□□□ 1.38
RPUSD3-209ENST00000451405 FAM182BQ5T319 152 aa23.68■■□□□ 1.38
RPUSD3-209ENST00000451405 CCDC61Q9Y6R9 512 aa23.68■■□□□ 1.38
RPUSD3-209ENST00000451405 ITSN1Q15811 1721 aa23.67■■□□□ 1.38
RPUSD3-209ENST00000451405 ACEP12821 1306 aa23.67■■□□□ 1.38
RPUSD3-209ENST00000451405 CENPJQ9HC77 1338 aaPredicted RBP23.66■■□□□ 1.38
RPUSD3-209ENST00000451405 PLEKHG3A1L390 1219 aa23.66■■□□□ 1.38
RPUSD3-209ENST00000451405 NBPF8Q3BBV2 869 aa23.66■■□□□ 1.38
RPUSD3-209ENST00000451405 NWD2Q9ULI1 1742 aa23.65■■□□□ 1.38
RPUSD3-209ENST00000451405 CABP2Q9NPB3 220 aa23.64■■□□□ 1.37
RPUSD3-209ENST00000451405 POLR3AO14802 1390 aaPredicted RBP23.64■■□□□ 1.37
RPUSD3-209ENST00000451405 NUTM2GQ5VZR2 741 aa23.63■■□□□ 1.37
RPUSD3-209ENST00000451405 CRYBG1Q9Y4K1 1723 aa23.63■■□□□ 1.37
RPUSD3-209ENST00000451405 TOPAZ1Q8N9V7 1692 aa23.63■■□□□ 1.37
RPUSD3-209ENST00000451405 SRPK2P78362 688 aaKnown RBP23.62■■□□□ 1.37
RPUSD3-209ENST00000451405 EZH2Q15910 746 aaKnown RBP23.62■■□□□ 1.37
RPUSD3-209ENST00000451405 SPATA31A5Q5VU36 1347 aa23.59■■□□□ 1.37
RPUSD3-209ENST00000451405 SPATA31A7Q8IWB4 1347 aa23.59■■□□□ 1.37
RPUSD3-209ENST00000451405 TRPM1Q7Z4N2 1603 aa23.59■■□□□ 1.37
RPUSD3-209ENST00000451405 NRAPQ86VF7 1730 aa23.59■■□□□ 1.37
RPUSD3-209ENST00000451405 COL14A1Q05707 1796 aaKnown RBP23.58■■□□□ 1.37
RPUSD3-209ENST00000451405 QRICH2Q9H0J4 1663 aa23.58■■□□□ 1.37
RPUSD3-209ENST00000451405 TRIM37O94972 964 aa23.57■■□□□ 1.36
RPUSD3-209ENST00000451405 YY1P25490 414 aa23.57■■□□□ 1.36
RPUSD3-209ENST00000451405 PPIP5K1Q6PFW1 1433 aa23.57■■□□□ 1.36
RPUSD3-209ENST00000451405 ZC3H6P61129 1189 aaKnown RBP23.56■■□□□ 1.36
RPUSD3-209ENST00000451405 CHRNA2Q15822 529 aa23.56■■□□□ 1.36
RPUSD3-209ENST00000451405 FAM196AQ6ZSG2 479 aa23.56■■□□□ 1.36
RPUSD3-209ENST00000451405 PRDM11Q9NQV5 511 aa23.56■■□□□ 1.36
RPUSD3-209ENST00000451405 KIAA0232Q92628 1395 aa23.55■■□□□ 1.36
RPUSD3-209ENST00000451405 APBA3O96018 575 aa23.55■■□□□ 1.36
RPUSD3-209ENST00000451405 ABTB2Q8N961 1025 aa23.55■■□□□ 1.36
RPUSD3-209ENST00000451405 CABP1Q9NZU7 370 aa23.55■■□□□ 1.36
RPUSD3-209ENST00000451405 CAMKK2Q96RR4 588 aa23.54■■□□□ 1.36
RPUSD3-209ENST00000451405 ROCK2O75116 1388 aaKnown RBP23.53■■□□□ 1.36
RPUSD3-209ENST00000451405 PHRF1Q9P1Y6 1649 aaKnown RBP23.53■■□□□ 1.36
RPUSD3-209ENST00000451405 DCAF8L1A6NGE4 600 aa23.53■■□□□ 1.36
RPUSD3-209ENST00000451405 DISP2A7MBM2 1401 aa23.52■■□□□ 1.36
RPUSD3-209ENST00000451405 NBPF14Q5TI25 921 aa23.52■■□□□ 1.36
RPUSD3-209ENST00000451405 RGPD1P0DJD0 1748 aa23.52■■□□□ 1.36
RPUSD3-209ENST00000451405 STRN4Q9NRL3 753 aa23.51■■□□□ 1.35
RPUSD3-209ENST00000451405 PPP1R1BQ9UD71 204 aaPredicted RBP23.5■■□□□ 1.35
RPUSD3-209ENST00000451405 EVC2Q86UK5 1308 aa23.5■■□□□ 1.35
RPUSD3-209ENST00000451405 PDE3BQ13370 1112 aa23.48■■□□□ 1.35
RPUSD3-209ENST00000451405 SPATA31A1Q5TZJ5 1347 aa23.48■■□□□ 1.35
RPUSD3-209ENST00000451405 EVA1CP58658 441 aa23.47■■□□□ 1.35
RPUSD3-209ENST00000451405 NLRP13Q86W25 1043 aa23.47■■□□□ 1.35
RPUSD3-209ENST00000451405 USP35Q9P2H5 1018 aa23.47■■□□□ 1.35
RPUSD3-209ENST00000451405 USP19O94966 1318 aa23.47■■□□□ 1.35
RPUSD3-209ENST00000451405 PARD3Q8TEW0 1356 aa23.47■■□□□ 1.35
RPUSD3-209ENST00000451405 GCP02774 474 aa23.45■■□□□ 1.34
RPUSD3-209ENST00000451405 TRIM26Q12899 539 aaPredicted RBP23.45■■□□□ 1.34
RPUSD3-209ENST00000451405 NRKQ7Z2Y5 1582 aa23.44■■□□□ 1.34
RPUSD3-209ENST00000451405 USP6P35125 1406 aa23.44■■□□□ 1.34
RPUSD3-209ENST00000451405 BRD4O60885 1362 aaPredicted RBP23.43■■□□□ 1.34
RPUSD3-209ENST00000451405 SSH2Q76I76 1423 aa23.42■■□□□ 1.34
RPUSD3-209ENST00000451405 CAMTA1Q9Y6Y1 1673 aa23.42■■□□□ 1.34
RPUSD3-209ENST00000451405 NLRP6P59044 892 aa23.42■■□□□ 1.34
RPUSD3-209ENST00000451405 CARD11Q9BXL7 1154 aa23.42■■□□□ 1.34
RPUSD3-209ENST00000451405 SPON1Q9HCB6 807 aa23.42■■□□□ 1.34
RPUSD3-209ENST00000451405 CPDO75976 1380 aa23.41■■□□□ 1.34
RPUSD3-209ENST00000451405 TONSLQ96HA7 1378 aa23.4■■□□□ 1.34
RPUSD3-209ENST00000451405 THSD7AQ9UPZ6 1657 aa23.39■■□□□ 1.34
RPUSD3-209ENST00000451405 LARP1Q6PKG0 1096 aaKnown RBP23.39■■□□□ 1.33
RPUSD3-209ENST00000451405 LMO7Q8WWI1 1683 aa23.38■■□□□ 1.33
RPUSD3-209ENST00000451405 ZNF692Q9BU19 519 aaPredicted RBP23.38■■□□□ 1.33
RPUSD3-209ENST00000451405 TNS1Q9HBL0 1735 aaKnown RBP23.38■■□□□ 1.33
RPUSD3-209ENST00000451405 TTC21BQ7Z4L5 1316 aa23.37■■□□□ 1.33
RPUSD3-209ENST00000451405 KCNQ2O43526 872 aa23.37■■□□□ 1.33
RPUSD3-209ENST00000451405 BARGINQ6ZT62 677 aa23.37■■□□□ 1.33
RPUSD3-209ENST00000451405 ZBTB7CA1YPR0 619 aa23.36■■□□□ 1.33
RPUSD3-209ENST00000451405 PIK3C2AO00443 1686 aa23.35■■□□□ 1.33
RPUSD3-209ENST00000451405 CPSF1Q10570 1443 aaKnown RBP23.34■■□□□ 1.33
RPUSD3-209ENST00000451405 TCP11L2Q8N4U5 519 aa23.34■■□□□ 1.33
RPUSD3-209ENST00000451405 SBNO2Q9Y2G9 1366 aa23.34■■□□□ 1.33
RPUSD3-209ENST00000451405 AKAP12Q02952 1782 aa23.34■■□□□ 1.33
RPUSD3-209ENST00000451405 SLIT3O75094 1523 aa23.33■■□□□ 1.33
RPUSD3-209ENST00000451405 AXIN2Q9Y2T1 843 aa23.31■■□□□ 1.32
RPUSD3-209ENST00000451405 COL5A2P05997 1499 aaPredicted RBP23.3■■□□□ 1.32
RPUSD3-209ENST00000451405 AATKQ6ZMQ8 1374 aa23.3■■□□□ 1.32
RPUSD3-209ENST00000451405 KTN1Q86UP2 1357 aaKnown RBP23.3■■□□□ 1.32
RPUSD3-209ENST00000451405 NINLQ9Y2I6 1382 aa23.29■■□□□ 1.32
RPUSD3-209ENST00000451405 C11orf95C9JLR9 678 aaPredicted RBP23.29■■□□□ 1.32
RPUSD3-209ENST00000451405 TTC21AQ8NDW8 1320 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms