RNA–Protein interactions for RNA: ENST00000450299.6

CCDC196-206, Transcript of coiled-coil domain containing 196, humanhuman

TSL 3

Gene CCDC196, Length 722 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-206ENST00000450299 PRIM1P49642 420 aaKnown RBP9.85□□□□□ -0.83
CCDC196-206ENST00000450299 AFAP1Q8N556 730 aa9.85□□□□□ -0.83
CCDC196-206ENST00000450299 TMUB1Q9BVT8 246 aa9.85□□□□□ -0.83
CCDC196-206ENST00000450299 CDK12Q9NYV4 1490 aaPredicted RBP9.85□□□□□ -0.83
CCDC196-206ENST00000450299 PLEKHD1A6NEE1 506 aa9.84□□□□□ -0.83
CCDC196-206ENST00000450299 NUDT18Q6ZVK8 323 aa9.84□□□□□ -0.83
CCDC196-206ENST00000450299 P3H3Q8IVL6 736 aa9.84□□□□□ -0.83
CCDC196-206ENST00000450299 ABCA6Q8N139 1617 aa9.84□□□□□ -0.83
CCDC196-206ENST00000450299 COPS2P61201 443 aa9.83□□□□□ -0.84
CCDC196-206ENST00000450299 SYNMO15061 1565 aa9.83□□□□□ -0.84
CCDC196-206ENST00000450299 RAPGEF6Q8TEU7 1601 aa9.82□□□□□ -0.84
CCDC196-206ENST00000450299 TRIM67Q6ZTA4 783 aa9.82□□□□□ -0.84
CCDC196-206ENST00000450299 A2ML1A8K2U0 1454 aa9.82□□□□□ -0.84
CCDC196-206ENST00000450299 ZNF518AQ6AHZ1 1483 aa9.82□□□□□ -0.84
CCDC196-206ENST00000450299 KDM5CP41229 1560 aa9.82□□□□□ -0.84
CCDC196-206ENST00000450299 XIRP1Q702N8 1843 aaKnown RBP9.82□□□□□ -0.84
CCDC196-206ENST00000450299 PLCH2O75038 1416 aa9.82□□□□□ -0.84
CCDC196-206ENST00000450299 NECTIN2Q92692 538 aa9.81□□□□□ -0.84
CCDC196-206ENST00000450299 CLTCQ00610 1675 aaKnown RBP9.8□□□□□ -0.84
CCDC196-206ENST00000450299 ROBO1Q9Y6N7 1651 aa9.8□□□□□ -0.84
CCDC196-206ENST00000450299 YY1P25490 414 aa9.8□□□□□ -0.84
CCDC196-206ENST00000450299 MEX3CQ5U5Q3 659 aaKnown RBP9.8□□□□□ -0.84
CCDC196-206ENST00000450299 ANKLE2Q86XL3 938 aa9.8□□□□□ -0.84
CCDC196-206ENST00000450299 LRP5O75197 1615 aa9.79□□□□□ -0.84
CCDC196-206ENST00000450299 LRP6O75581 1613 aa9.79□□□□□ -0.84
CCDC196-206ENST00000450299 JCADQ9P266 1359 aa9.79□□□□□ -0.84
CCDC196-206ENST00000450299 GRXCR2A6NFK2 248 aa9.79□□□□□ -0.84
CCDC196-206ENST00000450299 NUTM2BA6NNL0 878 aaPredicted RBP9.79□□□□□ -0.84
CCDC196-206ENST00000450299 NUTM2EB1AL46 878 aaPredicted RBP9.79□□□□□ -0.84
CCDC196-206ENST00000450299 NUTM2DQ5VT03 806 aaPredicted RBP9.79□□□□□ -0.84
CCDC196-206ENST00000450299 NUTM2AQ8IVF1 878 aaPredicted RBP9.79□□□□□ -0.84
CCDC196-206ENST00000450299 RBM27Q9P2N5 1060 aaKnown RBP9.79□□□□□ -0.84
CCDC196-206ENST00000450299 NPHP4O75161 1426 aaPredicted RBP9.79□□□□□ -0.84
CCDC196-206ENST00000450299 NUP153P49790 1475 aaKnown RBP9.79□□□□□ -0.84
CCDC196-206ENST00000450299 ZPR1O75312 459 aa9.78□□□□□ -0.84
CCDC196-206ENST00000450299 MYT1Q01538 1121 aa9.78□□□□□ -0.84
CCDC196-206ENST00000450299 SWT1Q5T5J6 900 aaKnown RBP9.78□□□□□ -0.84
CCDC196-206ENST00000450299 CDK13Q14004 1512 aaKnown RBP9.77□□□□□ -0.84
CCDC196-206ENST00000450299 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.77□□□□□ -0.84
CCDC196-206ENST00000450299 SLC19A1P41440 591 aa9.77□□□□□ -0.85
CCDC196-206ENST00000450299 PKDCCQ504Y2 493 aa9.77□□□□□ -0.85
CCDC196-206ENST00000450299 EFCAB2Q5VUJ9 269 aa9.77□□□□□ -0.85
CCDC196-206ENST00000450299 SLF2Q8IX21 1173 aa9.77□□□□□ -0.85
CCDC196-206ENST00000450299 CDHR5Q9HBB8 845 aa9.77□□□□□ -0.85
CCDC196-206ENST00000450299 MED14O60244 1454 aa9.77□□□□□ -0.85
CCDC196-206ENST00000450299 IQGAP1P46940 1657 aa9.77□□□□□ -0.85
CCDC196-206ENST00000450299 PHLPP1O60346 1717 aa9.76□□□□□ -0.85
CCDC196-206ENST00000450299 RGS12O14924 1447 aa9.76□□□□□ -0.85
CCDC196-206ENST00000450299 POTECB2RU33 542 aa9.76□□□□□ -0.85
CCDC196-206ENST00000450299 DGAT1O75907 488 aa9.76□□□□□ -0.85
CCDC196-206ENST00000450299 EMID1Q96A84 441 aaPredicted RBP9.76□□□□□ -0.85
CCDC196-206ENST00000450299 MLH3Q9UHC1 1453 aa9.76□□□□□ -0.85
CCDC196-206ENST00000450299 RNF223E7ERA6 249 aa9.75□□□□□ -0.85
CCDC196-206ENST00000450299 OSBPP22059 807 aa9.75□□□□□ -0.85
CCDC196-206ENST00000450299 TTC13Q8NBP0 860 aa9.75□□□□□ -0.85
CCDC196-206ENST00000450299 DEPDC5O75140 1603 aa9.74□□□□□ -0.85
CCDC196-206ENST00000450299 SENP3-EIF4A1A0A087X0R7 540 aa9.74□□□□□ -0.85
CCDC196-206ENST00000450299 SPRYD7Q5W111 196 aa9.73□□□□□ -0.85
CCDC196-206ENST00000450299 SPATA31A6Q5VVP1 1343 aa9.73□□□□□ -0.85
CCDC196-206ENST00000450299 ITSN2Q9NZM3 1697 aa9.73□□□□□ -0.85
CCDC196-206ENST00000450299 ATAD2Q6PL18 1390 aa9.73□□□□□ -0.85
CCDC196-206ENST00000450299 MYO5CQ9NQX4 1742 aa9.73□□□□□ -0.85
CCDC196-206ENST00000450299 ABCC1P33527 1531 aa9.72□□□□□ -0.85
CCDC196-206ENST00000450299 PRR20EP86478 221 aa9.72□□□□□ -0.85
CCDC196-206ENST00000450299 PRR20CP86479 221 aa9.72□□□□□ -0.85
CCDC196-206ENST00000450299 PRR20DP86480 221 aa9.72□□□□□ -0.85
CCDC196-206ENST00000450299 PRR20BP86481 221 aa9.72□□□□□ -0.85
CCDC196-206ENST00000450299 PRR20AP86496 221 aa9.72□□□□□ -0.85
CCDC196-206ENST00000450299 ZNF598Q86UK7 904 aaKnown RBP9.72□□□□□ -0.85
CCDC196-206ENST00000450299 KIDINS220Q9ULH0 1771 aa9.71□□□□□ -0.85
CCDC196-206ENST00000450299 ARIH1Q9Y4X5 557 aaPredicted RBP9.71□□□□□ -0.86
CCDC196-206ENST00000450299 PCDHB3Q9Y5E6 796 aa9.71□□□□□ -0.86
CCDC196-206ENST00000450299 SLC4A3P48751 1232 aa9.7□□□□□ -0.86
CCDC196-206ENST00000450299 RBM6P78332 1123 aaKnown RBP9.7□□□□□ -0.86
CCDC196-206ENST00000450299 E2F4Q16254 413 aa9.7□□□□□ -0.86
CCDC196-206ENST00000450299 PADI6Q6TGC4 694 aa9.7□□□□□ -0.86
CCDC196-206ENST00000450299 THEMISQ8N1K5 641 aaPredicted RBP9.7□□□□□ -0.86
CCDC196-206ENST00000450299 PRR14Q9BWN1 585 aa9.7□□□□□ -0.86
CCDC196-206ENST00000450299 BLOC1S3Q6QNY0 202 aa9.69□□□□□ -0.86
CCDC196-206ENST00000450299 NPDC1Q9NQX5 325 aaPredicted RBP9.69□□□□□ -0.86
CCDC196-206ENST00000450299 COL16A1Q07092 1604 aaPredicted RBP9.68□□□□□ -0.86
CCDC196-206ENST00000450299 AFF2P51816 1311 aa9.68□□□□□ -0.86
CCDC196-206ENST00000450299 ANKLE1Q8NAG6 615 aa9.68□□□□□ -0.86
CCDC196-206ENST00000450299 EYA1Q99502 592 aa9.68□□□□□ -0.86
CCDC196-206ENST00000450299 QTRT2Q9H974 415 aaKnown RBP9.68□□□□□ -0.86
CCDC196-206ENST00000450299 ZC3H13Q5T200 1668 aaKnown RBP9.67□□□□□ -0.86
CCDC196-206ENST00000450299 TNRQ92752 1358 aa9.66□□□□□ -0.86
CCDC196-206ENST00000450299 LCE2AQ5TA79 106 aaPredicted RBP9.66□□□□□ -0.86
CCDC196-206ENST00000450299 FBXO31Q5XUX0 539 aaPredicted RBP9.66□□□□□ -0.86
CCDC196-206ENST00000450299 GGT6Q6P531 493 aa9.66□□□□□ -0.86
CCDC196-206ENST00000450299 TREML4Q6UXN2 200 aa9.66□□□□□ -0.86
CCDC196-206ENST00000450299 LIAT1Q6ZQX7 453 aa9.66□□□□□ -0.86
CCDC196-206ENST00000450299 CCDC125Q86Z20 511 aa9.66□□□□□ -0.86
CCDC196-206ENST00000450299 ARHGAP5Q13017 1502 aa9.66□□□□□ -0.86
CCDC196-206ENST00000450299 KDM5DQ9BY66 1539 aa9.66□□□□□ -0.86
CCDC196-206ENST00000450299 FGD6Q6ZV73 1430 aa9.65□□□□□ -0.86
CCDC196-206ENST00000450299 FAM187AA6NFU0 413 aa9.65□□□□□ -0.86
CCDC196-206ENST00000450299 PPEF1O14829 653 aaPredicted RBP9.65□□□□□ -0.86
CCDC196-206ENST00000450299 TLL1O43897 1013 aa9.65□□□□□ -0.86
CCDC196-206ENST00000450299 GDF9O60383 454 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms