RNA–Protein interactions for RNA: ENST00000449864.5

HDLBP-223, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-223ENST00000449864 POLR3AO14802 1390 aaPredicted RBP22.51■■□□□ 1.19
HDLBP-223ENST00000449864 COL14A1Q05707 1796 aaKnown RBP22.51■■□□□ 1.19
HDLBP-223ENST00000449864 CABP2Q9NPB3 220 aa22.51■■□□□ 1.19
HDLBP-223ENST00000449864 RGS12O14924 1447 aa22.5■■□□□ 1.19
HDLBP-223ENST00000449864 ATRNO75882 1429 aa22.5■■□□□ 1.19
HDLBP-223ENST00000449864 BCL9LQ86UU0 1499 aa22.5■■□□□ 1.19
HDLBP-223ENST00000449864 ACEP12821 1306 aa22.5■■□□□ 1.19
HDLBP-223ENST00000449864 EVC2Q86UK5 1308 aa22.5■■□□□ 1.19
HDLBP-223ENST00000449864 AKAP12Q02952 1782 aa22.5■■□□□ 1.19
HDLBP-223ENST00000449864 SLIT2O94813 1529 aa22.49■■□□□ 1.19
HDLBP-223ENST00000449864 CARD11Q9BXL7 1154 aa22.49■■□□□ 1.19
HDLBP-223ENST00000449864 NRAPQ86VF7 1730 aa22.48■■□□□ 1.19
HDLBP-223ENST00000449864 PLEKHG3A1L390 1219 aa22.47■■□□□ 1.19
HDLBP-223ENST00000449864 PCGF6Q9BYE7 350 aa22.47■■□□□ 1.19
HDLBP-223ENST00000449864 GLI3P10071 1580 aa22.44■■□□□ 1.18
HDLBP-223ENST00000449864 SBNO2Q9Y2G9 1366 aa22.43■■□□□ 1.18
HDLBP-223ENST00000449864 NRKQ7Z2Y5 1582 aa22.42■■□□□ 1.18
HDLBP-223ENST00000449864 UNC5CLQ8IV45 518 aa22.42■■□□□ 1.18
HDLBP-223ENST00000449864 MON2Q7Z3U7 1717 aa22.42■■□□□ 1.18
HDLBP-223ENST00000449864 BRWD3Q6RI45 1802 aa22.41■■□□□ 1.18
HDLBP-223ENST00000449864 USP6P35125 1406 aa22.4■■□□□ 1.18
HDLBP-223ENST00000449864 PIK3C2AO00443 1686 aa22.39■■□□□ 1.18
HDLBP-223ENST00000449864 ATAD2Q6PL18 1390 aa22.39■■□□□ 1.18
HDLBP-223ENST00000449864 NUTM2GQ5VZR2 741 aa22.39■■□□□ 1.17
HDLBP-223ENST00000449864 CABP1Q9NZU7 370 aa22.39■■□□□ 1.17
HDLBP-223ENST00000449864 BRD4O60885 1362 aaPredicted RBP22.38■■□□□ 1.17
HDLBP-223ENST00000449864 GJD4Q96KN9 370 aaPredicted RBP22.38■■□□□ 1.17
HDLBP-223ENST00000449864 FAM83GA6ND36 823 aa22.37■■□□□ 1.17
HDLBP-223ENST00000449864 ABTB2Q8N961 1025 aa22.37■■□□□ 1.17
HDLBP-223ENST00000449864 CLSPNQ9HAW4 1339 aa22.36■■□□□ 1.17
HDLBP-223ENST00000449864 PRDM11Q9NQV5 511 aa22.36■■□□□ 1.17
HDLBP-223ENST00000449864 CCDC9Q9Y3X0 531 aaKnown RBP22.36■■□□□ 1.17
HDLBP-223ENST00000449864 BTG4Q9NY30 223 aa22.34■■□□□ 1.17
HDLBP-223ENST00000449864 KIAA0232Q92628 1395 aa22.34■■□□□ 1.17
HDLBP-223ENST00000449864 VPS72Q15906 364 aa22.33■■□□□ 1.17
HDLBP-223ENST00000449864 NLRP13Q86W25 1043 aa22.31■■□□□ 1.16
HDLBP-223ENST00000449864 UPF1Q92900 1129 aaKnown RBP eCLIP22.31■■□□□ 1.16
HDLBP-223ENST00000449864 USP19O94966 1318 aa22.31■■□□□ 1.16
HDLBP-223ENST00000449864 LMO7Q8WWI1 1683 aa22.3■■□□□ 1.16
HDLBP-223ENST00000449864 ZC3H6P61129 1189 aaKnown RBP22.3■■□□□ 1.16
HDLBP-223ENST00000449864 SLIT3O75094 1523 aa22.3■■□□□ 1.16
HDLBP-223ENST00000449864 KTN1Q86UP2 1357 aaKnown RBP22.29■■□□□ 1.16
HDLBP-223ENST00000449864 SSH2Q76I76 1423 aa22.29■■□□□ 1.16
HDLBP-223ENST00000449864 CHRNA2Q15822 529 aa22.28■■□□□ 1.16
HDLBP-223ENST00000449864 CCER1Q8TC90 406 aaPredicted RBP22.28■■□□□ 1.16
HDLBP-223ENST00000449864 ZNF692Q9BU19 519 aaPredicted RBP22.28■■□□□ 1.16
HDLBP-223ENST00000449864 TIMELESSQ9UNS1 1208 aa22.28■■□□□ 1.16
HDLBP-223ENST00000449864 CPSF1Q10570 1443 aaKnown RBP22.28■■□□□ 1.16
HDLBP-223ENST00000449864 USP47Q96K76 1375 aa22.27■■□□□ 1.16
HDLBP-223ENST00000449864 ST20-MTHFSA0A0A6YYL1 179 aa22.27■■□□□ 1.16
HDLBP-223ENST00000449864 NLRP6P59044 892 aa22.27■■□□□ 1.16
HDLBP-223ENST00000449864 USP54Q70EL1 1684 aa22.26■■□□□ 1.15
HDLBP-223ENST00000449864 TMC1Q8TDI8 760 aa22.26■■□□□ 1.15
HDLBP-223ENST00000449864 CPDO75976 1380 aa22.25■■□□□ 1.15
HDLBP-223ENST00000449864 RGPD5Q99666 1765 aa22.25■■□□□ 1.15
HDLBP-223ENST00000449864 A0A0G2JS52 829 aa22.25■■□□□ 1.15
HDLBP-223ENST00000449864 MYT1Q01538 1121 aa22.25■■□□□ 1.15
HDLBP-223ENST00000449864 TTC21AQ8NDW8 1320 aa22.25■■□□□ 1.15
HDLBP-223ENST00000449864 TTC21BQ7Z4L5 1316 aa22.24■■□□□ 1.15
HDLBP-223ENST00000449864 THSD7AQ9UPZ6 1657 aa22.23■■□□□ 1.15
HDLBP-223ENST00000449864 CAMTA1Q9Y6Y1 1673 aa22.23■■□□□ 1.15
HDLBP-223ENST00000449864 CD163L1Q9NR16 1453 aa22.23■■□□□ 1.15
HDLBP-223ENST00000449864 LTN1O94822 1766 aa22.23■■□□□ 1.15
HDLBP-223ENST00000449864 SLC24A1O60721 1099 aa22.23■■□□□ 1.15
HDLBP-223ENST00000449864 GCP02774 474 aa22.23■■□□□ 1.15
HDLBP-223ENST00000449864 STRN4Q9NRL3 753 aa22.23■■□□□ 1.15
HDLBP-223ENST00000449864 HDGFL2Q7Z4V5 671 aaPredicted RBP22.22■■□□□ 1.15
HDLBP-223ENST00000449864 SEPT12Q8IYM1 358 aa22.22■■□□□ 1.15
HDLBP-223ENST00000449864 TESK2Q96S53 571 aa22.22■■□□□ 1.15
HDLBP-223ENST00000449864 COL18A1P39060 1754 aa22.21■■□□□ 1.15
HDLBP-223ENST00000449864 ZBTB7CA1YPR0 619 aa22.21■■□□□ 1.15
HDLBP-223ENST00000449864 SPATA31A5Q5VU36 1347 aa22.21■■□□□ 1.15
HDLBP-223ENST00000449864 SPATA31A7Q8IWB4 1347 aa22.21■■□□□ 1.15
HDLBP-223ENST00000449864 FAM98CQ17RN3 349 aaKnown RBP22.2■■□□□ 1.14
HDLBP-223ENST00000449864 PUS7Q96PZ0 661 aaKnown RBP22.2■■□□□ 1.14
HDLBP-223ENST00000449864 NINLQ9Y2I6 1382 aa22.2■■□□□ 1.14
HDLBP-223ENST00000449864 EVA1CP58658 441 aa22.19■■□□□ 1.14
HDLBP-223ENST00000449864 TERF2IPQ9NYB0 399 aa22.19■■□□□ 1.14
HDLBP-223ENST00000449864 WNK3Q9BYP7 1800 aa22.19■■□□□ 1.14
HDLBP-223ENST00000449864 EP400Q96L91 3159 aa22.18■■□□□ 1.14
HDLBP-223ENST00000449864 EDC4Q6P2E9 1401 aaKnown RBP22.18■■□□□ 1.14
HDLBP-223ENST00000449864 A0A1W2PP64 1363 aa22.18■■□□□ 1.14
HDLBP-223ENST00000449864 SLC12A5Q9H2X9 1139 aa22.18■■□□□ 1.14
HDLBP-223ENST00000449864 NFAT5O94916 1531 aa22.17■■□□□ 1.14
HDLBP-223ENST00000449864 COL5A2P05997 1499 aaPredicted RBP22.17■■□□□ 1.14
HDLBP-223ENST00000449864 ONECUT3O60422 494 aaPredicted RBP22.17■■□□□ 1.14
HDLBP-223ENST00000449864 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.17■■□□□ 1.14
HDLBP-223ENST00000449864 SPATA31A1Q5TZJ5 1347 aa22.16■■□□□ 1.14
HDLBP-223ENST00000449864 TMF1P82094 1093 aa22.16■■□□□ 1.14
HDLBP-223ENST00000449864 KCNH5Q8NCM2 988 aa22.16■■□□□ 1.14
HDLBP-223ENST00000449864 MYOM1P52179 1685 aa22.16■■□□□ 1.14
HDLBP-223ENST00000449864 KIF20BQ96Q89 1820 aa22.15■■□□□ 1.14
HDLBP-223ENST00000449864 SOX12O15370 315 aa22.15■■□□□ 1.14
HDLBP-223ENST00000449864 KRT27Q7Z3Y8 459 aa22.15■■□□□ 1.14
HDLBP-223ENST00000449864 RGPD1P0DJD0 1748 aa22.14■■□□□ 1.14
HDLBP-223ENST00000449864 AATKQ6ZMQ8 1374 aa22.14■■□□□ 1.14
HDLBP-223ENST00000449864 ABCC6O95255 1503 aa22.13■■□□□ 1.13
HDLBP-223ENST00000449864 USP35Q9P2H5 1018 aa22.13■■□□□ 1.13
HDLBP-223ENST00000449864 PARP4Q9UKK3 1724 aaKnown RBP22.13■■□□□ 1.13
HDLBP-223ENST00000449864 NME9Q86XW9 330 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms