RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 HAP1P54257 671 aaPredicted RBP16.93■□□□□ 0.3
LSP1P3-201ENST00000449530 NGLY1Q96IV0 654 aa16.93■□□□□ 0.3
LSP1P3-201ENST00000449530 AKAP12Q02952 1782 aa16.92■□□□□ 0.3
LSP1P3-201ENST00000449530 PAK3O75914 559 aaPredicted RBP16.92■□□□□ 0.3
LSP1P3-201ENST00000449530 CABLES1Q8TDN4 633 aa16.92■□□□□ 0.3
LSP1P3-201ENST00000449530 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.92■□□□□ 0.3
LSP1P3-201ENST00000449530 PLEKHG3A1L390 1219 aa16.91■□□□□ 0.3
LSP1P3-201ENST00000449530 NWD2Q9ULI1 1742 aa16.88■□□□□ 0.29
LSP1P3-201ENST00000449530 USP21Q9UK80 565 aa16.88■□□□□ 0.29
LSP1P3-201ENST00000449530 NRKQ7Z2Y5 1582 aa16.88■□□□□ 0.29
LSP1P3-201ENST00000449530 ATAD2Q6PL18 1390 aa16.88■□□□□ 0.29
LSP1P3-201ENST00000449530 MON2Q7Z3U7 1717 aa16.87■□□□□ 0.29
LSP1P3-201ENST00000449530 CABP1Q9NZU7 370 aa16.87■□□□□ 0.29
LSP1P3-201ENST00000449530 TIMELESSQ9UNS1 1208 aa16.87■□□□□ 0.29
LSP1P3-201ENST00000449530 USP47Q96K76 1375 aa16.87■□□□□ 0.29
LSP1P3-201ENST00000449530 COL14A1Q05707 1796 aaKnown RBP16.87■□□□□ 0.29
LSP1P3-201ENST00000449530 USP6P35125 1406 aa16.87■□□□□ 0.29
LSP1P3-201ENST00000449530 SLIT2O94813 1529 aa16.86■□□□□ 0.29
LSP1P3-201ENST00000449530 PIK3C2AO00443 1686 aa16.86■□□□□ 0.29
LSP1P3-201ENST00000449530 RBM6P78332 1123 aaKnown RBP16.86■□□□□ 0.29
LSP1P3-201ENST00000449530 FNBP4Q8N3X1 1017 aaPredicted RBP16.86■□□□□ 0.29
LSP1P3-201ENST00000449530 QTRT2Q9H974 415 aaKnown RBP16.86■□□□□ 0.29
LSP1P3-201ENST00000449530 NRAPQ86VF7 1730 aa16.86■□□□□ 0.29
LSP1P3-201ENST00000449530 ATRNO75882 1429 aa16.86■□□□□ 0.29
LSP1P3-201ENST00000449530 BCL9LQ86UU0 1499 aa16.86■□□□□ 0.29
LSP1P3-201ENST00000449530 NUTM2GQ5VZR2 741 aa16.85■□□□□ 0.29
LSP1P3-201ENST00000449530 ZRANB1Q9UGI0 708 aa16.85■□□□□ 0.29
LSP1P3-201ENST00000449530 RGS12O14924 1447 aa16.84■□□□□ 0.29
LSP1P3-201ENST00000449530 ST20-MTHFSA0A0A6YYL1 179 aa16.83■□□□□ 0.28
LSP1P3-201ENST00000449530 TESK2Q96S53 571 aa16.82■□□□□ 0.28
LSP1P3-201ENST00000449530 TRPC5Q9UL62 973 aaPredicted RBP16.82■□□□□ 0.28
LSP1P3-201ENST00000449530 BRD4O60885 1362 aaPredicted RBP16.81■□□□□ 0.28
LSP1P3-201ENST00000449530 ABTB2Q8N961 1025 aa16.81■□□□□ 0.28
LSP1P3-201ENST00000449530 GLI3P10071 1580 aa16.81■□□□□ 0.28
LSP1P3-201ENST00000449530 SSH2Q76I76 1423 aa16.8■□□□□ 0.28
LSP1P3-201ENST00000449530 CD163L1Q9NR16 1453 aa16.8■□□□□ 0.28
LSP1P3-201ENST00000449530 CPSF1Q10570 1443 aaKnown RBP16.79■□□□□ 0.28
LSP1P3-201ENST00000449530 UNC5CLQ8IV45 518 aa16.79■□□□□ 0.28
LSP1P3-201ENST00000449530 KTN1Q86UP2 1357 aaKnown RBP16.78■□□□□ 0.28
LSP1P3-201ENST00000449530 KIAA0232Q92628 1395 aa16.78■□□□□ 0.28
LSP1P3-201ENST00000449530 USP19O94966 1318 aa16.78■□□□□ 0.28
LSP1P3-201ENST00000449530 TMC1Q8TDI8 760 aa16.78■□□□□ 0.28
LSP1P3-201ENST00000449530 PRDM11Q9NQV5 511 aa16.78■□□□□ 0.28
LSP1P3-201ENST00000449530 SLIT3O75094 1523 aa16.78■□□□□ 0.28
LSP1P3-201ENST00000449530 FAM83GA6ND36 823 aa16.77■□□□□ 0.28
LSP1P3-201ENST00000449530 USP54Q70EL1 1684 aa16.76■□□□□ 0.27
LSP1P3-201ENST00000449530 MYOM1P52179 1685 aa16.75■□□□□ 0.27
LSP1P3-201ENST00000449530 LMO7Q8WWI1 1683 aa16.75■□□□□ 0.27
LSP1P3-201ENST00000449530 TTC21BQ7Z4L5 1316 aa16.75■□□□□ 0.27
LSP1P3-201ENST00000449530 NLRP13Q86W25 1043 aa16.75■□□□□ 0.27
LSP1P3-201ENST00000449530 ZNF692Q9BU19 519 aaPredicted RBP16.75■□□□□ 0.27
LSP1P3-201ENST00000449530 BTG4Q9NY30 223 aa16.75■□□□□ 0.27
LSP1P3-201ENST00000449530 A0A1W2PP64 1363 aa16.75■□□□□ 0.27
LSP1P3-201ENST00000449530 ZC3H6P61129 1189 aaKnown RBP16.74■□□□□ 0.27
LSP1P3-201ENST00000449530 GJD4Q96KN9 370 aaPredicted RBP16.74■□□□□ 0.27
LSP1P3-201ENST00000449530 SLC12A5Q9H2X9 1139 aa16.74■□□□□ 0.27
LSP1P3-201ENST00000449530 NINLQ9Y2I6 1382 aa16.74■□□□□ 0.27
LSP1P3-201ENST00000449530 TTC21AQ8NDW8 1320 aa16.73■□□□□ 0.27
LSP1P3-201ENST00000449530 SLC24A1O60721 1099 aa16.73■□□□□ 0.27
LSP1P3-201ENST00000449530 NLRP6P59044 892 aa16.73■□□□□ 0.27
LSP1P3-201ENST00000449530 TMF1P82094 1093 aa16.73■□□□□ 0.27
LSP1P3-201ENST00000449530 CHRNA2Q15822 529 aa16.73■□□□□ 0.27
LSP1P3-201ENST00000449530 HDGFL2Q7Z4V5 671 aaPredicted RBP16.73■□□□□ 0.27
LSP1P3-201ENST00000449530 PUS7Q96PZ0 661 aaKnown RBP16.73■□□□□ 0.27
LSP1P3-201ENST00000449530 CCDC9Q9Y3X0 531 aaKnown RBP16.73■□□□□ 0.27
LSP1P3-201ENST00000449530 BRWD3Q6RI45 1802 aa16.73■□□□□ 0.27
LSP1P3-201ENST00000449530 EDC4Q6P2E9 1401 aaKnown RBP16.72■□□□□ 0.27
LSP1P3-201ENST00000449530 VPS72Q15906 364 aa16.72■□□□□ 0.27
LSP1P3-201ENST00000449530 CPDO75976 1380 aa16.72■□□□□ 0.27
LSP1P3-201ENST00000449530 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.71■□□□□ 0.27
LSP1P3-201ENST00000449530 TERF2IPQ9NYB0 399 aa16.71■□□□□ 0.27
LSP1P3-201ENST00000449530 NFAT5O94916 1531 aa16.7■□□□□ 0.26
LSP1P3-201ENST00000449530 ZBTB7CA1YPR0 619 aa16.7■□□□□ 0.26
LSP1P3-201ENST00000449530 GCP02774 474 aa16.7■□□□□ 0.26
LSP1P3-201ENST00000449530 CCDC125Q86Z20 511 aa16.7■□□□□ 0.26
LSP1P3-201ENST00000449530 CAMTA1Q9Y6Y1 1673 aa16.69■□□□□ 0.26
LSP1P3-201ENST00000449530 EP400Q96L91 3159 aa16.69■□□□□ 0.26
LSP1P3-201ENST00000449530 LTN1O94822 1766 aa16.69■□□□□ 0.26
LSP1P3-201ENST00000449530 ANKRD36BQ8N2N9 1353 aa16.68■□□□□ 0.26
LSP1P3-201ENST00000449530 SOX12O15370 315 aa16.68■□□□□ 0.26
LSP1P3-201ENST00000449530 NME9Q86XW9 330 aa16.68■□□□□ 0.26
LSP1P3-201ENST00000449530 COL18A1P39060 1754 aa16.68■□□□□ 0.26
LSP1P3-201ENST00000449530 RGPD5Q99666 1765 aa16.68■□□□□ 0.26
LSP1P3-201ENST00000449530 KIF20BQ96Q89 1820 aa16.68■□□□□ 0.26
LSP1P3-201ENST00000449530 THSD7AQ9UPZ6 1657 aa16.67■□□□□ 0.26
LSP1P3-201ENST00000449530 CDCA8Q53HL2 280 aa16.67■□□□□ 0.26
LSP1P3-201ENST00000449530 STRN4Q9NRL3 753 aa16.67■□□□□ 0.26
LSP1P3-201ENST00000449530 COL5A2P05997 1499 aaPredicted RBP16.67■□□□□ 0.26
LSP1P3-201ENST00000449530 EIF4G2P78344 907 aaKnown RBP eCLIP16.66■□□□□ 0.26
LSP1P3-201ENST00000449530 USP31Q70CQ4 1352 aa16.65■□□□□ 0.26
LSP1P3-201ENST00000449530 OVOS2A0A0J9YW53 1432 aa16.65■□□□□ 0.26
LSP1P3-201ENST00000449530 OVOS2Q6IE36 1432 aa16.65■□□□□ 0.26
LSP1P3-201ENST00000449530 A0A0G2JS52 829 aa16.65■□□□□ 0.26
LSP1P3-201ENST00000449530 HSPA5P11021 654 aaKnown RBP16.65■□□□□ 0.26
LSP1P3-201ENST00000449530 MYT1Q01538 1121 aa16.65■□□□□ 0.26
LSP1P3-201ENST00000449530 SPATA31A5Q5VU36 1347 aa16.65■□□□□ 0.26
LSP1P3-201ENST00000449530 SPATA31A7Q8IWB4 1347 aa16.65■□□□□ 0.26
LSP1P3-201ENST00000449530 KCNH5Q8NCM2 988 aa16.64■□□□□ 0.25
LSP1P3-201ENST00000449530 AATKQ6ZMQ8 1374 aa16.64■□□□□ 0.25
LSP1P3-201ENST00000449530 WNK3Q9BYP7 1800 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms