RNA–Protein interactions for RNA: ENST00000449260.6

PMEL-201, Transcript of premelanosome protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PMEL, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMEL-201ENST00000449260 PTCH1Q13635 1447 aa16.75■□□□□ 0.27
PMEL-201ENST00000449260 RBM33Q96EV2 1170 aaKnown RBP16.75■□□□□ 0.27
PMEL-201ENST00000449260 NUTM2FA1L443 756 aa16.74■□□□□ 0.27
PMEL-201ENST00000449260 NEUROD2Q15784 382 aa16.74■□□□□ 0.27
PMEL-201ENST00000449260 DMRT2Q9Y5R5 561 aa16.74■□□□□ 0.27
PMEL-201ENST00000449260 E9PSI1 815 aa16.73■□□□□ 0.27
PMEL-201ENST00000449260 RRP7AQ9Y3A4 280 aaKnown RBP16.73■□□□□ 0.27
PMEL-201ENST00000449260 XRN1Q8IZH2 1706 aaKnown RBP16.73■□□□□ 0.27
PMEL-201ENST00000449260 U2AF1L5P0DN76 240 aaPredicted RBP16.73■□□□□ 0.27
PMEL-201ENST00000449260 U2AF1Q01081 240 aaKnown RBP eCLIP16.73■□□□□ 0.27
PMEL-201ENST00000449260 WWC1Q8IX03 1113 aa16.73■□□□□ 0.27
PMEL-201ENST00000449260 TCP11L2Q8N4U5 519 aa16.73■□□□□ 0.27
PMEL-201ENST00000449260 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.73■□□□□ 0.27
PMEL-201ENST00000449260 KIF20BQ96Q89 1820 aa16.73■□□□□ 0.27
PMEL-201ENST00000449260 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.72■□□□□ 0.27
PMEL-201ENST00000449260 CHD2O14647 1828 aaKnown RBP16.72■□□□□ 0.27
PMEL-201ENST00000449260 CRBNQ96SW2 442 aa16.72■□□□□ 0.27
PMEL-201ENST00000449260 ERICH6Q7L0X2 663 aa16.71■□□□□ 0.27
PMEL-201ENST00000449260 NUDT16Q96DE0 195 aaKnown RBP16.7■□□□□ 0.26
PMEL-201ENST00000449260 NKTRP30414 1462 aaKnown RBP16.7■□□□□ 0.26
PMEL-201ENST00000449260 ATP7BP35670 1465 aa16.7■□□□□ 0.26
PMEL-201ENST00000449260 C20orf194Q5TEA3 1177 aa16.7■□□□□ 0.26
PMEL-201ENST00000449260 C14orf37Q86TY3 774 aa16.69■□□□□ 0.26
PMEL-201ENST00000449260 U2SURPO15042 1029 aaKnown RBP16.69■□□□□ 0.26
PMEL-201ENST00000449260 PPIP5K1Q6PFW1 1433 aa16.69■□□□□ 0.26
PMEL-201ENST00000449260 IQSEC2Q5JU85 1478 aa16.68■□□□□ 0.26
PMEL-201ENST00000449260 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.67■□□□□ 0.26
PMEL-201ENST00000449260 CCDC61Q9Y6R9 512 aa16.67■□□□□ 0.26
PMEL-201ENST00000449260 PRR36Q9H6K5 1346 aa16.66■□□□□ 0.26
PMEL-201ENST00000449260 PROSER2Q86WR7 435 aaPredicted RBP16.66■□□□□ 0.26
PMEL-201ENST00000449260 ADGRB2O60241 1585 aa16.66■□□□□ 0.26
PMEL-201ENST00000449260 COL3A1P02461 1466 aaPredicted RBP16.65■□□□□ 0.26
PMEL-201ENST00000449260 FBLN1P23142 703 aa16.65■□□□□ 0.26
PMEL-201ENST00000449260 PHF23Q9BUL5 403 aaPredicted RBP16.65■□□□□ 0.26
PMEL-201ENST00000449260 CPSF1Q10570 1443 aaKnown RBP16.65■□□□□ 0.26
PMEL-201ENST00000449260 BCAR3O75815 825 aa16.64■□□□□ 0.25
PMEL-201ENST00000449260 WDR63Q8IWG1 891 aa16.64■□□□□ 0.25
PMEL-201ENST00000449260 MAP2P11137 1827 aaKnown RBP16.64■□□□□ 0.25
PMEL-201ENST00000449260 DIAPH1O60610 1272 aaKnown RBP16.64■□□□□ 0.25
PMEL-201ENST00000449260 CCDC27Q2M243 656 aa16.64■□□□□ 0.25
PMEL-201ENST00000449260 STRCQ7RTU9 1775 aa16.64■□□□□ 0.25
PMEL-201ENST00000449260 EDC4Q6P2E9 1401 aaKnown RBP16.63■□□□□ 0.25
PMEL-201ENST00000449260 PPM1GO15355 546 aaPredicted RBP16.63■□□□□ 0.25
PMEL-201ENST00000449260 NME9Q86XW9 330 aa16.63■□□□□ 0.25
PMEL-201ENST00000449260 PLEKHF1Q96S99 279 aa16.62■□□□□ 0.25
PMEL-201ENST00000449260 POLKQ9UBT6 870 aa16.62■□□□□ 0.25
PMEL-201ENST00000449260 ZRANB1Q9UGI0 708 aa16.61■□□□□ 0.25
PMEL-201ENST00000449260 PNPLA6Q8IY17 1366 aa16.61■□□□□ 0.25
PMEL-201ENST00000449260 NWD1Q149M9 1564 aa16.61■□□□□ 0.25
PMEL-201ENST00000449260 CDC42BPGQ6DT37 1551 aa16.61■□□□□ 0.25
PMEL-201ENST00000449260 PMFBP1Q8TBY8 1022 aa16.61■□□□□ 0.25
PMEL-201ENST00000449260 NCBP3Q53F19 620 aaKnown RBP16.6■□□□□ 0.25
PMEL-201ENST00000449260 ITSN1Q15811 1721 aa16.6■□□□□ 0.25
PMEL-201ENST00000449260 NALCNQ8IZF0 1738 aa16.6■□□□□ 0.25
PMEL-201ENST00000449260 AKAP12Q02952 1782 aa16.6■□□□□ 0.25
PMEL-201ENST00000449260 MON2Q7Z3U7 1717 aa16.6■□□□□ 0.25
PMEL-201ENST00000449260 MAPK8IP3Q9UPT6 1336 aa16.59■□□□□ 0.25
PMEL-201ENST00000449260 TMPOP42166 694 aaKnown RBP16.59■□□□□ 0.25
PMEL-201ENST00000449260 ADGRL3Q9HAR2 1447 aa16.59■□□□□ 0.25
PMEL-201ENST00000449260 ZNF692Q9BU19 519 aaPredicted RBP16.58■□□□□ 0.25
PMEL-201ENST00000449260 ACEP12821 1306 aa16.58■□□□□ 0.24
PMEL-201ENST00000449260 COG3Q96JB2 828 aa16.57■□□□□ 0.24
PMEL-201ENST00000449260 PNNQ9H307 717 aaKnown RBP16.57■□□□□ 0.24
PMEL-201ENST00000449260 TMEM94Q12767 1356 aa16.57■□□□□ 0.24
PMEL-201ENST00000449260 STRCP1A6NGW2 1772 aa16.57■□□□□ 0.24
PMEL-201ENST00000449260 NGDNQ8NEJ9 315 aaKnown RBP16.57■□□□□ 0.24
PMEL-201ENST00000449260 MYH16Q9H6N6 1097 aa16.57■□□□□ 0.24
PMEL-201ENST00000449260 EMILIN1Q9Y6C2 1016 aa16.57■□□□□ 0.24
PMEL-201ENST00000449260 ZNF335Q9H4Z2 1342 aaPredicted RBP16.56■□□□□ 0.24
PMEL-201ENST00000449260 RGPD8O14715 1765 aaPredicted RBP16.56■□□□□ 0.24
PMEL-201ENST00000449260 PLEKHG3A1L390 1219 aa16.56■□□□□ 0.24
PMEL-201ENST00000449260 TRIM35Q9UPQ4 493 aa16.55■□□□□ 0.24
PMEL-201ENST00000449260 FANCIQ9NVI1 1328 aa16.55■□□□□ 0.24
PMEL-201ENST00000449260 TOPAZ1Q8N9V7 1692 aa16.55■□□□□ 0.24
PMEL-201ENST00000449260 FMN2Q9NZ56 1722 aa16.55■□□□□ 0.24
PMEL-201ENST00000449260 ANKARQ7Z5J8 1434 aa16.55■□□□□ 0.24
PMEL-201ENST00000449260 FCHSD2O94868 740 aa16.54■□□□□ 0.24
PMEL-201ENST00000449260 CANXP27824 592 aaKnown RBP16.54■□□□□ 0.24
PMEL-201ENST00000449260 RARSP54136 660 aaKnown RBP16.54■□□□□ 0.24
PMEL-201ENST00000449260 RIPK4P57078 832 aa16.54■□□□□ 0.24
PMEL-201ENST00000449260 C19orf44Q9H6X5 657 aa16.54■□□□□ 0.24
PMEL-201ENST00000449260 ESCO1Q5FWF5 840 aa16.54■□□□□ 0.24
PMEL-201ENST00000449260 FRAT1Q92837 279 aaPredicted RBP16.53■□□□□ 0.24
PMEL-201ENST00000449260 TCERG1O14776 1098 aaKnown RBP16.52■□□□□ 0.24
PMEL-201ENST00000449260 PRKAR2BP31323 418 aa16.52■□□□□ 0.24
PMEL-201ENST00000449260 RRS1Q15050 365 aaKnown RBP16.52■□□□□ 0.24
PMEL-201ENST00000449260 AATKQ6ZMQ8 1374 aa16.52■□□□□ 0.24
PMEL-201ENST00000449260 TTC21BQ7Z4L5 1316 aa16.52■□□□□ 0.23
PMEL-201ENST00000449260 ATF3P18847 181 aa16.52■□□□□ 0.23
PMEL-201ENST00000449260 PDE3AQ14432 1141 aa16.52■□□□□ 0.23
PMEL-201ENST00000449260 TSR2Q969E8 191 aaKnown RBP16.52■□□□□ 0.23
PMEL-201ENST00000449260 RSPH6AQ9H0K4 717 aa16.52■□□□□ 0.23
PMEL-201ENST00000449260 HMOX1P09601 288 aa16.51■□□□□ 0.23
PMEL-201ENST00000449260 PHF8Q9UPP1 1060 aa16.51■□□□□ 0.23
PMEL-201ENST00000449260 NEFMP07197 916 aa16.51■□□□□ 0.23
PMEL-201ENST00000449260 IL13P35225 146 aa16.51■□□□□ 0.23
PMEL-201ENST00000449260 BCL2L13Q9BXK5 485 aa16.51■□□□□ 0.23
PMEL-201ENST00000449260 LRRC7Q96NW7 1537 aa16.5■□□□□ 0.23
PMEL-201ENST00000449260 KDM2BQ8NHM5 1336 aa16.5■□□□□ 0.23
PMEL-201ENST00000449260 PANK1Q8TE04 598 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms