RNA–Protein interactions for RNA: ENST00000448789.2

RAB5B-202, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB5B, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-202ENST00000448789 HNRNPUQ00839 825 aaKnown RBP eCLIP20.27■□□□□ 0.84
RAB5B-202ENST00000448789 C19orf44Q9H6X5 657 aa20.27■□□□□ 0.84
RAB5B-202ENST00000448789 NCOA3Q9Y6Q9 1424 aa20.27■□□□□ 0.84
RAB5B-202ENST00000448789 LRRC7Q96NW7 1537 aa20.27■□□□□ 0.84
RAB5B-202ENST00000448789 PHF8Q9UPP1 1060 aa20.26■□□□□ 0.83
RAB5B-202ENST00000448789 C1orf167Q5SNV9 1468 aa20.24■□□□□ 0.83
RAB5B-202ENST00000448789 DCCP43146 1447 aa20.24■□□□□ 0.83
RAB5B-202ENST00000448789 MTHFSP49914 203 aa20.24■□□□□ 0.83
RAB5B-202ENST00000448789 ORAI2Q96SN7 254 aa20.24■□□□□ 0.83
RAB5B-202ENST00000448789 MST1RQ04912 1400 aa20.24■□□□□ 0.83
RAB5B-202ENST00000448789 FBLN1P23142 703 aa20.23■□□□□ 0.83
RAB5B-202ENST00000448789 ESCO1Q5FWF5 840 aa20.23■□□□□ 0.83
RAB5B-202ENST00000448789 OVOS2A0A0J9YW53 1432 aa20.23■□□□□ 0.83
RAB5B-202ENST00000448789 OVOS2Q6IE36 1432 aa20.23■□□□□ 0.83
RAB5B-202ENST00000448789 SENP3-EIF4A1A0A087X0R7 540 aa20.21■□□□□ 0.83
RAB5B-202ENST00000448789 DMRT2Q9Y5R5 561 aa20.21■□□□□ 0.83
RAB5B-202ENST00000448789 PIK3C2AO00443 1686 aa20.21■□□□□ 0.83
RAB5B-202ENST00000448789 SHPRHQ149N8 1683 aa20.21■□□□□ 0.83
RAB5B-202ENST00000448789 TTC21AQ8NDW8 1320 aa20.2■□□□□ 0.82
RAB5B-202ENST00000448789 ATF3P18847 181 aa20.2■□□□□ 0.82
RAB5B-202ENST00000448789 COG3Q96JB2 828 aa20.2■□□□□ 0.82
RAB5B-202ENST00000448789 MSH6P52701 1360 aa20.2■□□□□ 0.82
RAB5B-202ENST00000448789 ADAMTS8Q9UP79 889 aa20.19■□□□□ 0.82
RAB5B-202ENST00000448789 BLMP54132 1417 aaPredicted RBP20.19■□□□□ 0.82
RAB5B-202ENST00000448789 SCAF1Q9H7N4 1312 aaKnown RBP20.19■□□□□ 0.82
RAB5B-202ENST00000448789 COL3A1P02461 1466 aaPredicted RBP20.19■□□□□ 0.82
RAB5B-202ENST00000448789 WDR43Q15061 677 aaKnown RBP eCLIP20.17■□□□□ 0.82
RAB5B-202ENST00000448789 KIF1AQ12756 1690 aa20.16■□□□□ 0.82
RAB5B-202ENST00000448789 CADPS2Q86UW7 1296 aa20.16■□□□□ 0.82
RAB5B-202ENST00000448789 POLKQ9UBT6 870 aa20.16■□□□□ 0.82
RAB5B-202ENST00000448789 SMG6Q86US8 1419 aaKnown RBP20.15■□□□□ 0.82
RAB5B-202ENST00000448789 MARF1Q9Y4F3 1742 aaKnown RBP20.15■□□□□ 0.82
RAB5B-202ENST00000448789 FOXO3O43524 673 aa20.15■□□□□ 0.82
RAB5B-202ENST00000448789 EMILIN1Q9Y6C2 1016 aa20.15■□□□□ 0.82
RAB5B-202ENST00000448789 INSRP06213 1382 aa20.15■□□□□ 0.82
RAB5B-202ENST00000448789 AATKQ6ZMQ8 1374 aa20.15■□□□□ 0.82
RAB5B-202ENST00000448789 USP31Q70CQ4 1352 aa20.15■□□□□ 0.82
RAB5B-202ENST00000448789 XPCQ01831 940 aaPredicted RBP20.14■□□□□ 0.81
RAB5B-202ENST00000448789 PNPLA6Q8IY17 1366 aa20.13■□□□□ 0.81
RAB5B-202ENST00000448789 CFAP53Q96M91 514 aa20.13■□□□□ 0.81
RAB5B-202ENST00000448789 ZBED9Q6R2W3 1325 aa20.13■□□□□ 0.81
RAB5B-202ENST00000448789 PAK3O75914 559 aaPredicted RBP20.12■□□□□ 0.81
RAB5B-202ENST00000448789 PSME1Q06323 249 aa20.12■□□□□ 0.81
RAB5B-202ENST00000448789 RRS1Q15050 365 aaKnown RBP20.12■□□□□ 0.81
RAB5B-202ENST00000448789 NUTM2GQ5VZR2 741 aa20.12■□□□□ 0.81
RAB5B-202ENST00000448789 USP54Q70EL1 1684 aa20.12■□□□□ 0.81
RAB5B-202ENST00000448789 TRPM3Q9HCF6 1732 aaPredicted RBP20.11■□□□□ 0.81
RAB5B-202ENST00000448789 MAP2P11137 1827 aaKnown RBP20.1■□□□□ 0.81
RAB5B-202ENST00000448789 NLRP6P59044 892 aa20.1■□□□□ 0.81
RAB5B-202ENST00000448789 DDX17Q92841 729 aaKnown RBP20.1■□□□□ 0.81
RAB5B-202ENST00000448789 CDK12Q9NYV4 1490 aaPredicted RBP20.1■□□□□ 0.81
RAB5B-202ENST00000448789 LTBP4Q8N2S1 1624 aa20.09■□□□□ 0.81
RAB5B-202ENST00000448789 PPM1GO15355 546 aaPredicted RBP20.09■□□□□ 0.81
RAB5B-202ENST00000448789 SOX12O15370 315 aa20.09■□□□□ 0.81
RAB5B-202ENST00000448789 ABTB2Q8N961 1025 aa20.09■□□□□ 0.81
RAB5B-202ENST00000448789 CCDC146Q8IYE0 955 aa20.08■□□□□ 0.81
RAB5B-202ENST00000448789 PEAK1Q9H792 1746 aa20.08■□□□□ 0.8
RAB5B-202ENST00000448789 KRT28Q7Z3Y7 464 aa20.07■□□□□ 0.8
RAB5B-202ENST00000448789 BRINP3Q76B58 766 aa20.06■□□□□ 0.8
RAB5B-202ENST00000448789 SALL2Q9Y467 1007 aaPredicted RBP20.05■□□□□ 0.8
RAB5B-202ENST00000448789 DIAPH1O60610 1272 aaKnown RBP20.04■□□□□ 0.8
RAB5B-202ENST00000448789 MAP3K19Q56UN5 1328 aa20.04■□□□□ 0.8
RAB5B-202ENST00000448789 PXDNQ92626 1479 aa20.04■□□□□ 0.8
RAB5B-202ENST00000448789 SLAIN2Q9P270 581 aa20.03■□□□□ 0.8
RAB5B-202ENST00000448789 ALS2Q96Q42 1657 aa20.03■□□□□ 0.8
RAB5B-202ENST00000448789 U2SURPO15042 1029 aaKnown RBP20.02■□□□□ 0.8
RAB5B-202ENST00000448789 U2AF1L5P0DN76 240 aaPredicted RBP20.02■□□□□ 0.8
RAB5B-202ENST00000448789 U2AF1Q01081 240 aaKnown RBP eCLIP20.02■□□□□ 0.8
RAB5B-202ENST00000448789 NFAT5O94916 1531 aa20.02■□□□□ 0.8
RAB5B-202ENST00000448789 NPHP3Q7Z494 1330 aa20.02■□□□□ 0.79
RAB5B-202ENST00000448789 IQSEC2Q5JU85 1478 aa20■□□□□ 0.79
RAB5B-202ENST00000448789 APAF1O14727 1248 aa20■□□□□ 0.79
RAB5B-202ENST00000448789 IL13P35225 146 aa20■□□□□ 0.79
RAB5B-202ENST00000448789 NUDCQ9Y266 331 aa20■□□□□ 0.79
RAB5B-202ENST00000448789 SLIT3O75094 1523 aa20■□□□□ 0.79
RAB5B-202ENST00000448789 LMOD2Q6P5Q4 547 aa19.99■□□□□ 0.79
RAB5B-202ENST00000448789 SBNO1A3KN83 1393 aa19.99■□□□□ 0.79
RAB5B-202ENST00000448789 USP19O94966 1318 aa19.98■□□□□ 0.79
RAB5B-202ENST00000448789 HSP90AB2PQ58FF8 381 aa19.98■□□□□ 0.79
RAB5B-202ENST00000448789 PLEKHG5O94827 1062 aa19.97■□□□□ 0.79
RAB5B-202ENST00000448789 RUNDC1Q96C34 613 aa19.97■□□□□ 0.79
RAB5B-202ENST00000448789 TNS3Q68CZ2 1445 aa19.97■□□□□ 0.79
RAB5B-202ENST00000448789 MED1Q15648 1581 aaPredicted RBP19.97■□□□□ 0.79
RAB5B-202ENST00000448789 EIF4A2Q14240 407 aaKnown RBP19.97■□□□□ 0.79
RAB5B-202ENST00000448789 FLT4P35916 1363 aa19.96■□□□□ 0.79
RAB5B-202ENST00000448789 PLEKHF1Q96S99 279 aa19.95■□□□□ 0.78
RAB5B-202ENST00000448789 AMPHP49418 695 aa19.94■□□□□ 0.78
RAB5B-202ENST00000448789 SPATA31A3Q5VYP0 1347 aa19.94■□□□□ 0.78
RAB5B-202ENST00000448789 ZNF521Q96K83 1311 aa19.94■□□□□ 0.78
RAB5B-202ENST00000448789 GCP02774 474 aa19.93■□□□□ 0.78
RAB5B-202ENST00000448789 TCP11L2Q8N4U5 519 aa19.93■□□□□ 0.78
RAB5B-202ENST00000448789 RSPH6AQ9H0K4 717 aa19.93■□□□□ 0.78
RAB5B-202ENST00000448789 NHSL1Q5SYE7 1610 aa19.93■□□□□ 0.78
RAB5B-202ENST00000448789 SOS2Q07890 1332 aaPredicted RBP19.93■□□□□ 0.78
RAB5B-202ENST00000448789 LTN1O94822 1766 aa19.93■□□□□ 0.78
RAB5B-202ENST00000448789 HMOX1P09601 288 aa19.92■□□□□ 0.78
RAB5B-202ENST00000448789 HOXC9P31274 260 aa19.92■□□□□ 0.78
RAB5B-202ENST00000448789 RRP7AQ9Y3A4 280 aaKnown RBP19.92■□□□□ 0.78
RAB5B-202ENST00000448789 RGPD1P0DJD0 1748 aa19.92■□□□□ 0.78
RAB5B-202ENST00000448789 KIF24Q5T7B8 1368 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms