RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 ROCK2O75116 1388 aaKnown RBP28.2■■■□□ 2.1
VCP-203ENST00000448530 ATAD2Q6PL18 1390 aa28.2■■■□□ 2.1
VCP-203ENST00000448530 ACEP12821 1306 aa28.18■■■□□ 2.1
VCP-203ENST00000448530 RALGAPBQ86X10 1494 aa28.17■■■□□ 2.1
VCP-203ENST00000448530 POLR3AO14802 1390 aaPredicted RBP28.17■■■□□ 2.1
VCP-203ENST00000448530 PLEKHG3A1L390 1219 aa28.17■■■□□ 2.1
VCP-203ENST00000448530 FAM83GA6ND36 823 aa28.17■■■□□ 2.1
VCP-203ENST00000448530 CCDC9Q9Y3X0 531 aaKnown RBP28.17■■■□□ 2.1
VCP-203ENST00000448530 NBPF8Q3BBV2 869 aa28.16■■■□□ 2.1
VCP-203ENST00000448530 CABP2Q9NPB3 220 aa28.15■■■□□ 2.1
VCP-203ENST00000448530 VPS72Q15906 364 aa28.14■■■□□ 2.1
VCP-203ENST00000448530 GLI3P10071 1580 aa28.14■■■□□ 2.1
VCP-203ENST00000448530 PPIP5K1Q6PFW1 1433 aa28.13■■■□□ 2.09
VCP-203ENST00000448530 COL14A1Q05707 1796 aaKnown RBP28.13■■■□□ 2.09
VCP-203ENST00000448530 TONSLQ96HA7 1378 aa28.12■■■□□ 2.09
VCP-203ENST00000448530 CRYBG1Q9Y4K1 1723 aa28.12■■■□□ 2.09
VCP-203ENST00000448530 BTG4Q9NY30 223 aa28.11■■■□□ 2.09
VCP-203ENST00000448530 EVC2Q86UK5 1308 aa28.11■■■□□ 2.09
VCP-203ENST00000448530 NUTM2GQ5VZR2 741 aa28.09■■■□□ 2.09
VCP-203ENST00000448530 PRDM11Q9NQV5 511 aa28.09■■■□□ 2.09
VCP-203ENST00000448530 ABTB2Q8N961 1025 aa28.07■■■□□ 2.08
VCP-203ENST00000448530 PHRF1Q9P1Y6 1649 aaKnown RBP28.07■■■□□ 2.08
VCP-203ENST00000448530 NRAPQ86VF7 1730 aa28.06■■■□□ 2.08
VCP-203ENST00000448530 CABP1Q9NZU7 370 aa28.05■■■□□ 2.08
VCP-203ENST00000448530 SEPT12Q8IYM1 358 aa28.04■■■□□ 2.08
VCP-203ENST00000448530 BRD4O60885 1362 aaPredicted RBP28.03■■■□□ 2.08
VCP-203ENST00000448530 KIAA0232Q92628 1395 aa28.03■■■□□ 2.08
VCP-203ENST00000448530 A0A0G2JS52 829 aa28.03■■■□□ 2.08
VCP-203ENST00000448530 MYT1Q01538 1121 aa28.03■■■□□ 2.08
VCP-203ENST00000448530 CARD11Q9BXL7 1154 aa28.03■■■□□ 2.08
VCP-203ENST00000448530 BRWD3Q6RI45 1802 aa28.02■■■□□ 2.08
VCP-203ENST00000448530 ZC3H6P61129 1189 aaKnown RBP28.02■■■□□ 2.08
VCP-203ENST00000448530 NLRP13Q86W25 1043 aa28■■■□□ 2.07
VCP-203ENST00000448530 CCDC125Q86Z20 511 aa28■■■□□ 2.07
VCP-203ENST00000448530 ONECUT3O60422 494 aaPredicted RBP27.99■■■□□ 2.07
VCP-203ENST00000448530 CHRNA2Q15822 529 aa27.99■■■□□ 2.07
VCP-203ENST00000448530 USP6P35125 1406 aa27.98■■■□□ 2.07
VCP-203ENST00000448530 FAM98CQ17RN3 349 aaKnown RBP27.97■■■□□ 2.07
VCP-203ENST00000448530 NRKQ7Z2Y5 1582 aa27.95■■■□□ 2.07
VCP-203ENST00000448530 EP400Q96L91 3159 aa27.95■■■□□ 2.06
VCP-203ENST00000448530 USP19O94966 1318 aa27.94■■■□□ 2.06
VCP-203ENST00000448530 SPATA31A5Q5VU36 1347 aa27.94■■■□□ 2.06
VCP-203ENST00000448530 SPATA31A7Q8IWB4 1347 aa27.94■■■□□ 2.06
VCP-203ENST00000448530 KRT27Q7Z3Y8 459 aa27.94■■■□□ 2.06
VCP-203ENST00000448530 STRN4Q9NRL3 753 aa27.94■■■□□ 2.06
VCP-203ENST00000448530 ZNF692Q9BU19 519 aaPredicted RBP27.93■■■□□ 2.06
VCP-203ENST00000448530 SBNO2Q9Y2G9 1366 aa27.92■■■□□ 2.06
VCP-203ENST00000448530 EVA1CP58658 441 aa27.92■■■□□ 2.06
VCP-203ENST00000448530 NLRP6P59044 892 aa27.92■■■□□ 2.06
VCP-203ENST00000448530 GCP02774 474 aa27.91■■■□□ 2.06
VCP-203ENST00000448530 CPDO75976 1380 aa27.9■■■□□ 2.06
VCP-203ENST00000448530 SF3B2Q13435 895 aaKnown RBP27.89■■■□□ 2.06
VCP-203ENST00000448530 BLMP54132 1417 aaPredicted RBP27.89■■■□□ 2.06
VCP-203ENST00000448530 AKAP12Q02952 1782 aa27.88■■■□□ 2.05
VCP-203ENST00000448530 SPATA31A1Q5TZJ5 1347 aa27.87■■■□□ 2.05
VCP-203ENST00000448530 SSH2Q76I76 1423 aa27.86■■■□□ 2.05
VCP-203ENST00000448530 ZBTB7CA1YPR0 619 aa27.86■■■□□ 2.05
VCP-203ENST00000448530 PIK3C2AO00443 1686 aa27.85■■■□□ 2.05
VCP-203ENST00000448530 KTN1Q86UP2 1357 aaKnown RBP27.85■■■□□ 2.05
VCP-203ENST00000448530 TTC21BQ7Z4L5 1316 aa27.84■■■□□ 2.05
VCP-203ENST00000448530 CAMTA1Q9Y6Y1 1673 aa27.84■■■□□ 2.05
VCP-203ENST00000448530 USP35Q9P2H5 1018 aa27.83■■■□□ 2.05
VCP-203ENST00000448530 LMO7Q8WWI1 1683 aa27.83■■■□□ 2.05
VCP-203ENST00000448530 TTC21AQ8NDW8 1320 aa27.83■■■□□ 2.05
VCP-203ENST00000448530 SLIT3O75094 1523 aa27.82■■■□□ 2.04
VCP-203ENST00000448530 THSD7AQ9UPZ6 1657 aa27.82■■■□□ 2.04
VCP-203ENST00000448530 TMC1Q8TDI8 760 aa27.82■■■□□ 2.04
VCP-203ENST00000448530 CPSF1Q10570 1443 aaKnown RBP27.82■■■□□ 2.04
VCP-203ENST00000448530 LARP1Q6PKG0 1096 aaKnown RBP27.79■■■□□ 2.04
VCP-203ENST00000448530 ZRANB1Q9UGI0 708 aa27.79■■■□□ 2.04
VCP-203ENST00000448530 MON2Q7Z3U7 1717 aa27.78■■■□□ 2.04
VCP-203ENST00000448530 KCNH5Q8NCM2 988 aa27.78■■■□□ 2.04
VCP-203ENST00000448530 SLC24A1O60721 1099 aa27.77■■■□□ 2.04
VCP-203ENST00000448530 HDGFL2Q7Z4V5 671 aaPredicted RBP27.77■■■□□ 2.04
VCP-203ENST00000448530 AATKQ6ZMQ8 1374 aa27.76■■■□□ 2.03
VCP-203ENST00000448530 BARGINQ6ZT62 677 aa27.76■■■□□ 2.03
VCP-203ENST00000448530 TCP11L2Q8N4U5 519 aa27.76■■■□□ 2.03
VCP-203ENST00000448530 COL5A2P05997 1499 aaPredicted RBP27.76■■■□□ 2.03
VCP-203ENST00000448530 ST20-MTHFSA0A0A6YYL1 179 aa27.75■■■□□ 2.03
VCP-203ENST00000448530 DEFB132Q7Z7B7 95 aa27.75■■■□□ 2.03
VCP-203ENST00000448530 PUS7Q96PZ0 661 aaKnown RBP27.75■■■□□ 2.03
VCP-203ENST00000448530 PCGF6Q9BYE7 350 aa27.75■■■□□ 2.03
VCP-203ENST00000448530 SOX12O15370 315 aa27.74■■■□□ 2.03
VCP-203ENST00000448530 FAM182BQ5T319 152 aa27.74■■■□□ 2.03
VCP-203ENST00000448530 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.74■■■□□ 2.03
VCP-203ENST00000448530 TERF2IPQ9NYB0 399 aa27.74■■■□□ 2.03
VCP-203ENST00000448530 SLC12A5Q9H2X9 1139 aa27.73■■■□□ 2.03
VCP-203ENST00000448530 THRAP3Q9Y2W1 955 aaKnown RBP27.73■■■□□ 2.03
VCP-203ENST00000448530 BAG6P46379 1132 aa27.72■■■□□ 2.03
VCP-203ENST00000448530 PDE3BQ13370 1112 aa27.72■■■□□ 2.03
VCP-203ENST00000448530 RGPD1P0DJD0 1748 aa27.71■■■□□ 2.03
VCP-203ENST00000448530 CRB1P82279 1406 aa27.71■■■□□ 2.03
VCP-203ENST00000448530 TESK2Q96S53 571 aa27.7■■■□□ 2.02
VCP-203ENST00000448530 CD163L1Q9NR16 1453 aa27.7■■■□□ 2.02
VCP-203ENST00000448530 ARHGEF25Q86VW2 580 aa27.69■■■□□ 2.02
VCP-203ENST00000448530 COL18A1P39060 1754 aa27.68■■■□□ 2.02
VCP-203ENST00000448530 FAM196AQ6ZSG2 479 aa27.68■■■□□ 2.02
VCP-203ENST00000448530 TOM1L2Q6ZVM7 507 aa27.68■■■□□ 2.02
VCP-203ENST00000448530 CLSPNQ9HAW4 1339 aa27.67■■■□□ 2.02
VCP-203ENST00000448530 EDC4Q6P2E9 1401 aaKnown RBP27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms