RNA–Protein interactions for RNA: ENST00000448471.2

CDK3-202, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDK3, Length 1,570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-202ENST00000448471 BTG4Q9NY30 223 aa20.56■□□□□ 0.88
CDK3-202ENST00000448471 POGKQ9P215 609 aa20.55■□□□□ 0.88
CDK3-202ENST00000448471 DLC1Q96QB1 1528 aa20.55■□□□□ 0.88
CDK3-202ENST00000448471 TRPM3Q9HCF6 1732 aaPredicted RBP20.54■□□□□ 0.88
CDK3-202ENST00000448471 ADGRB2O60241 1585 aa20.54■□□□□ 0.88
CDK3-202ENST00000448471 COL14A1Q05707 1796 aaKnown RBP20.53■□□□□ 0.88
CDK3-202ENST00000448471 EN1Q05925 392 aaPredicted RBP20.52■□□□□ 0.88
CDK3-202ENST00000448471 RGPD1P0DJD0 1748 aa20.52■□□□□ 0.88
CDK3-202ENST00000448471 GPRASP1Q5JY77 1395 aa20.52■□□□□ 0.87
CDK3-202ENST00000448471 ALS2Q96Q42 1657 aa20.51■□□□□ 0.87
CDK3-202ENST00000448471 FAM182BQ5T319 152 aa20.51■□□□□ 0.87
CDK3-202ENST00000448471 HIRIP3Q9BW71 556 aaPredicted RBP20.5■□□□□ 0.87
CDK3-202ENST00000448471 SPATA31A5Q5VU36 1347 aa20.49■□□□□ 0.87
CDK3-202ENST00000448471 SPATA31A7Q8IWB4 1347 aa20.49■□□□□ 0.87
CDK3-202ENST00000448471 R3HDM1Q15032 1099 aaKnown RBP20.48■□□□□ 0.87
CDK3-202ENST00000448471 PRR36Q9H6K5 1346 aa20.48■□□□□ 0.87
CDK3-202ENST00000448471 EIF3AQ14152 1382 aaKnown RBP20.48■□□□□ 0.87
CDK3-202ENST00000448471 DISP2A7MBM2 1401 aa20.48■□□□□ 0.87
CDK3-202ENST00000448471 TULP4Q9NRJ4 1543 aa20.47■□□□□ 0.87
CDK3-202ENST00000448471 ADGRB1O14514 1584 aa20.47■□□□□ 0.87
CDK3-202ENST00000448471 MINK1Q8N4C8 1332 aaPredicted RBP20.47■□□□□ 0.87
CDK3-202ENST00000448471 THSD7AQ9UPZ6 1657 aa20.47■□□□□ 0.87
CDK3-202ENST00000448471 TRAK1Q9UPV9 953 aa20.46■□□□□ 0.87
CDK3-202ENST00000448471 NBPF8Q3BBV2 869 aa20.46■□□□□ 0.87
CDK3-202ENST00000448471 CRYBG1Q9Y4K1 1723 aa20.45■□□□□ 0.86
CDK3-202ENST00000448471 PRDM11Q9NQV5 511 aa20.45■□□□□ 0.86
CDK3-202ENST00000448471 TNS1Q9HBL0 1735 aaKnown RBP20.45■□□□□ 0.86
CDK3-202ENST00000448471 PAK3O75914 559 aaPredicted RBP20.44■□□□□ 0.86
CDK3-202ENST00000448471 NGDNQ8NEJ9 315 aaKnown RBP20.44■□□□□ 0.86
CDK3-202ENST00000448471 EZH2Q15910 746 aaKnown RBP20.43■□□□□ 0.86
CDK3-202ENST00000448471 WASLO00401 505 aaPredicted RBP20.42■□□□□ 0.86
CDK3-202ENST00000448471 SPATA31A1Q5TZJ5 1347 aa20.4■□□□□ 0.86
CDK3-202ENST00000448471 EIF4G2P78344 907 aaKnown RBP eCLIP20.4■□□□□ 0.86
CDK3-202ENST00000448471 KIAA0232Q92628 1395 aa20.4■□□□□ 0.86
CDK3-202ENST00000448471 CAMKK2Q96RR4 588 aa20.39■□□□□ 0.85
CDK3-202ENST00000448471 TRIM37O94972 964 aa20.38■□□□□ 0.85
CDK3-202ENST00000448471 CHRNA2Q15822 529 aa20.38■□□□□ 0.85
CDK3-202ENST00000448471 FAM196AQ6ZSG2 479 aa20.38■□□□□ 0.85
CDK3-202ENST00000448471 STRN4Q9NRL3 753 aa20.38■□□□□ 0.85
CDK3-202ENST00000448471 HSPA5P11021 654 aaKnown RBP20.36■□□□□ 0.85
CDK3-202ENST00000448471 KDM2AQ9Y2K7 1162 aa20.36■□□□□ 0.85
CDK3-202ENST00000448471 PHRF1Q9P1Y6 1649 aaKnown RBP20.36■□□□□ 0.85
CDK3-202ENST00000448471 ATP7BP35670 1465 aa20.36■□□□□ 0.85
CDK3-202ENST00000448471 APBA3O96018 575 aa20.35■□□□□ 0.85
CDK3-202ENST00000448471 PARD3Q8TEW0 1356 aa20.35■□□□□ 0.85
CDK3-202ENST00000448471 ZC3H6P61129 1189 aaKnown RBP20.34■□□□□ 0.85
CDK3-202ENST00000448471 DCAF11Q8TEB1 546 aa20.34■□□□□ 0.85
CDK3-202ENST00000448471 ITSN1Q15811 1721 aa20.34■□□□□ 0.85
CDK3-202ENST00000448471 NUDT16Q96DE0 195 aaKnown RBP20.34■□□□□ 0.85
CDK3-202ENST00000448471 USP35Q9P2H5 1018 aa20.34■□□□□ 0.85
CDK3-202ENST00000448471 NUTM2GQ5VZR2 741 aa20.32■□□□□ 0.84
CDK3-202ENST00000448471 MIER1Q8N108 512 aa20.32■□□□□ 0.84
CDK3-202ENST00000448471 STAC3Q96MF2 364 aa20.32■□□□□ 0.84
CDK3-202ENST00000448471 PDE3BQ13370 1112 aa20.31■□□□□ 0.84
CDK3-202ENST00000448471 SSH2Q76I76 1423 aa20.31■□□□□ 0.84
CDK3-202ENST00000448471 RREB1Q92766 1687 aa20.3■□□□□ 0.84
CDK3-202ENST00000448471 BARGINQ6ZT62 677 aa20.3■□□□□ 0.84
CDK3-202ENST00000448471 ARHGEF28Q8N1W1 1705 aaKnown RBP20.3■□□□□ 0.84
CDK3-202ENST00000448471 EVA1CP58658 441 aa20.29■□□□□ 0.84
CDK3-202ENST00000448471 NUP188Q5SRE5 1749 aa20.28■□□□□ 0.84
CDK3-202ENST00000448471 POLR3AO14802 1390 aaPredicted RBP20.28■□□□□ 0.84
CDK3-202ENST00000448471 NBPF14Q5TI25 921 aa20.27■□□□□ 0.84
CDK3-202ENST00000448471 NRKQ7Z2Y5 1582 aa20.27■□□□□ 0.84
CDK3-202ENST00000448471 ACEP12821 1306 aa20.27■□□□□ 0.84
CDK3-202ENST00000448471 LARP1Q6PKG0 1096 aaKnown RBP20.26■□□□□ 0.83
CDK3-202ENST00000448471 CDK19Q9BWU1 502 aa20.26■□□□□ 0.83
CDK3-202ENST00000448471 CAMTA1Q9Y6Y1 1673 aa20.26■□□□□ 0.83
CDK3-202ENST00000448471 TOPAZ1Q8N9V7 1692 aa20.25■□□□□ 0.83
CDK3-202ENST00000448471 DDX10Q13206 875 aaKnown RBP20.25■□□□□ 0.83
CDK3-202ENST00000448471 TCP11L2Q8N4U5 519 aa20.25■□□□□ 0.83
CDK3-202ENST00000448471 LMO7Q8WWI1 1683 aa20.24■□□□□ 0.83
CDK3-202ENST00000448471 YY1P25490 414 aa20.24■□□□□ 0.83
CDK3-202ENST00000448471 USP47Q96K76 1375 aa20.24■□□□□ 0.83
CDK3-202ENST00000448471 TRPM1Q7Z4N2 1603 aa20.24■□□□□ 0.83
CDK3-202ENST00000448471 CPDO75976 1380 aa20.23■□□□□ 0.83
CDK3-202ENST00000448471 ABTB2Q8N961 1025 aa20.23■□□□□ 0.83
CDK3-202ENST00000448471 CCDC61Q9Y6R9 512 aa20.23■□□□□ 0.83
CDK3-202ENST00000448471 USP19O94966 1318 aa20.21■□□□□ 0.83
CDK3-202ENST00000448471 PLEKHG3A1L390 1219 aa20.21■□□□□ 0.83
CDK3-202ENST00000448471 CARD11Q9BXL7 1154 aa20.21■□□□□ 0.83
CDK3-202ENST00000448471 THRAP3Q9Y2W1 955 aaKnown RBP20.21■□□□□ 0.83
CDK3-202ENST00000448471 WASHC2AQ641Q2 1341 aa20.21■□□□□ 0.83
CDK3-202ENST00000448471 SPON1Q9HCB6 807 aa20.21■□□□□ 0.83
CDK3-202ENST00000448471 ROCK2O75116 1388 aaKnown RBP20.2■□□□□ 0.82
CDK3-202ENST00000448471 PPP1R1BQ9UD71 204 aaPredicted RBP20.2■□□□□ 0.82
CDK3-202ENST00000448471 PARP4Q9UKK3 1724 aaKnown RBP20.18■□□□□ 0.82
CDK3-202ENST00000448471 KCNQ2O43526 872 aa20.18■□□□□ 0.82
CDK3-202ENST00000448471 GCP02774 474 aa20.18■□□□□ 0.82
CDK3-202ENST00000448471 COL5A2P05997 1499 aaPredicted RBP20.18■□□□□ 0.82
CDK3-202ENST00000448471 CCDC7Q96M83 1385 aa20.18■□□□□ 0.82
CDK3-202ENST00000448471 NLRP13Q86W25 1043 aa20.17■□□□□ 0.82
CDK3-202ENST00000448471 OVOS2A0A0G2JMS6 1433 aa20.16■□□□□ 0.82
CDK3-202ENST00000448471 OVOS2A0A0J9YW53 1432 aa20.16■□□□□ 0.82
CDK3-202ENST00000448471 CRB1P82279 1406 aa20.16■□□□□ 0.82
CDK3-202ENST00000448471 OVOS2Q6IE36 1432 aa20.16■□□□□ 0.82
CDK3-202ENST00000448471 C11orf95C9JLR9 678 aaPredicted RBP20.16■□□□□ 0.82
CDK3-202ENST00000448471 NINLQ9Y2I6 1382 aa20.15■□□□□ 0.82
CDK3-202ENST00000448471 PPIP5K1Q6PFW1 1433 aa20.14■□□□□ 0.82
CDK3-202ENST00000448471 DCAF8L1A6NGE4 600 aa20.14■□□□□ 0.81
CDK3-202ENST00000448471 PEAK1Q9H792 1746 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms