RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 NWD2Q9ULI1 1742 aa25.36■■□□□ 1.65
DDX56-207ENST00000448192 ACEP12821 1306 aa25.36■■□□□ 1.65
DDX56-207ENST00000448192 CABP2Q9NPB3 220 aa25.34■■□□□ 1.65
DDX56-207ENST00000448192 CRYBG1Q9Y4K1 1723 aa25.34■■□□□ 1.65
DDX56-207ENST00000448192 FAM83GA6ND36 823 aa25.33■■□□□ 1.65
DDX56-207ENST00000448192 NBPF8Q3BBV2 869 aa25.33■■□□□ 1.65
DDX56-207ENST00000448192 POLR3AO14802 1390 aaPredicted RBP25.32■■□□□ 1.64
DDX56-207ENST00000448192 GLI3P10071 1580 aa25.32■■□□□ 1.64
DDX56-207ENST00000448192 PLEKHG3A1L390 1219 aa25.32■■□□□ 1.64
DDX56-207ENST00000448192 RALGAPBQ86X10 1494 aa25.32■■□□□ 1.64
DDX56-207ENST00000448192 PPIP5K1Q6PFW1 1433 aa25.31■■□□□ 1.64
DDX56-207ENST00000448192 CCDC9Q9Y3X0 531 aaKnown RBP25.31■■□□□ 1.64
DDX56-207ENST00000448192 ATAD2Q6PL18 1390 aa25.3■■□□□ 1.64
DDX56-207ENST00000448192 COL14A1Q05707 1796 aaKnown RBP25.29■■□□□ 1.64
DDX56-207ENST00000448192 NUTM2GQ5VZR2 741 aa25.29■■□□□ 1.64
DDX56-207ENST00000448192 TONSLQ96HA7 1378 aa25.29■■□□□ 1.64
DDX56-207ENST00000448192 VPS72Q15906 364 aa25.28■■□□□ 1.64
DDX56-207ENST00000448192 PHRF1Q9P1Y6 1649 aaKnown RBP25.26■■□□□ 1.63
DDX56-207ENST00000448192 NRAPQ86VF7 1730 aa25.26■■□□□ 1.63
DDX56-207ENST00000448192 BTG4Q9NY30 223 aa25.26■■□□□ 1.63
DDX56-207ENST00000448192 EVC2Q86UK5 1308 aa25.26■■□□□ 1.63
DDX56-207ENST00000448192 BRWD3Q6RI45 1802 aa25.24■■□□□ 1.63
DDX56-207ENST00000448192 CABP1Q9NZU7 370 aa25.24■■□□□ 1.63
DDX56-207ENST00000448192 ABTB2Q8N961 1025 aa25.23■■□□□ 1.63
DDX56-207ENST00000448192 PRDM11Q9NQV5 511 aa25.23■■□□□ 1.63
DDX56-207ENST00000448192 CARD11Q9BXL7 1154 aa25.21■■□□□ 1.63
DDX56-207ENST00000448192 EP400Q96L91 3159 aa25.21■■□□□ 1.63
DDX56-207ENST00000448192 KIAA0232Q92628 1395 aa25.2■■□□□ 1.63
DDX56-207ENST00000448192 ZC3H6P61129 1189 aaKnown RBP25.2■■□□□ 1.62
DDX56-207ENST00000448192 SEPT12Q8IYM1 358 aa25.2■■□□□ 1.62
DDX56-207ENST00000448192 CHRNA2Q15822 529 aa25.18■■□□□ 1.62
DDX56-207ENST00000448192 A0A0G2JS52 829 aa25.16■■□□□ 1.62
DDX56-207ENST00000448192 USP6P35125 1406 aa25.16■■□□□ 1.62
DDX56-207ENST00000448192 MYT1Q01538 1121 aa25.16■■□□□ 1.62
DDX56-207ENST00000448192 NRKQ7Z2Y5 1582 aa25.16■■□□□ 1.62
DDX56-207ENST00000448192 NLRP13Q86W25 1043 aa25.15■■□□□ 1.62
DDX56-207ENST00000448192 BRD4O60885 1362 aaPredicted RBP25.15■■□□□ 1.62
DDX56-207ENST00000448192 ONECUT3O60422 494 aaPredicted RBP25.14■■□□□ 1.62
DDX56-207ENST00000448192 FAM98CQ17RN3 349 aaKnown RBP25.14■■□□□ 1.62
DDX56-207ENST00000448192 AKAP12Q02952 1782 aa25.13■■□□□ 1.61
DDX56-207ENST00000448192 USP19O94966 1318 aa25.12■■□□□ 1.61
DDX56-207ENST00000448192 STRN4Q9NRL3 753 aa25.12■■□□□ 1.61
DDX56-207ENST00000448192 SPATA31A5Q5VU36 1347 aa25.12■■□□□ 1.61
DDX56-207ENST00000448192 SPATA31A7Q8IWB4 1347 aa25.12■■□□□ 1.61
DDX56-207ENST00000448192 SBNO2Q9Y2G9 1366 aa25.1■■□□□ 1.61
DDX56-207ENST00000448192 GCP02774 474 aa25.1■■□□□ 1.61
DDX56-207ENST00000448192 NLRP6P59044 892 aa25.1■■□□□ 1.61
DDX56-207ENST00000448192 KRT27Q7Z3Y8 459 aa25.1■■□□□ 1.61
DDX56-207ENST00000448192 CCDC125Q86Z20 511 aa25.1■■□□□ 1.61
DDX56-207ENST00000448192 ZNF692Q9BU19 519 aaPredicted RBP25.09■■□□□ 1.61
DDX56-207ENST00000448192 PIK3C2AO00443 1686 aa25.09■■□□□ 1.61
DDX56-207ENST00000448192 EVA1CP58658 441 aa25.08■■□□□ 1.61
DDX56-207ENST00000448192 SSH2Q76I76 1423 aa25.08■■□□□ 1.61
DDX56-207ENST00000448192 CPDO75976 1380 aa25.06■■□□□ 1.6
DDX56-207ENST00000448192 ZBTB7CA1YPR0 619 aa25.06■■□□□ 1.6
DDX56-207ENST00000448192 LMO7Q8WWI1 1683 aa25.05■■□□□ 1.6
DDX56-207ENST00000448192 CAMTA1Q9Y6Y1 1673 aa25.05■■□□□ 1.6
DDX56-207ENST00000448192 SPATA31A1Q5TZJ5 1347 aa25.05■■□□□ 1.6
DDX56-207ENST00000448192 TTC21BQ7Z4L5 1316 aa25.05■■□□□ 1.6
DDX56-207ENST00000448192 KTN1Q86UP2 1357 aaKnown RBP25.04■■□□□ 1.6
DDX56-207ENST00000448192 BLMP54132 1417 aaPredicted RBP25.03■■□□□ 1.6
DDX56-207ENST00000448192 SLIT3O75094 1523 aa25.03■■□□□ 1.6
DDX56-207ENST00000448192 USP35Q9P2H5 1018 aa25.03■■□□□ 1.6
DDX56-207ENST00000448192 THSD7AQ9UPZ6 1657 aa25.03■■□□□ 1.6
DDX56-207ENST00000448192 MON2Q7Z3U7 1717 aa25.03■■□□□ 1.6
DDX56-207ENST00000448192 CPSF1Q10570 1443 aaKnown RBP25.03■■□□□ 1.6
DDX56-207ENST00000448192 TMC1Q8TDI8 760 aa25.02■■□□□ 1.6
DDX56-207ENST00000448192 PCGF6Q9BYE7 350 aa25.02■■□□□ 1.6
DDX56-207ENST00000448192 SF3B2Q13435 895 aaKnown RBP25■■□□□ 1.59
DDX56-207ENST00000448192 LARP1Q6PKG0 1096 aaKnown RBP25■■□□□ 1.59
DDX56-207ENST00000448192 TTC21AQ8NDW8 1320 aa25■■□□□ 1.59
DDX56-207ENST00000448192 ST20-MTHFSA0A0A6YYL1 179 aa24.98■■□□□ 1.59
DDX56-207ENST00000448192 FAM182BQ5T319 152 aa24.98■■□□□ 1.59
DDX56-207ENST00000448192 SOX12O15370 315 aa24.97■■□□□ 1.59
DDX56-207ENST00000448192 COL5A2P05997 1499 aaPredicted RBP24.96■■□□□ 1.59
DDX56-207ENST00000448192 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.96■■□□□ 1.59
DDX56-207ENST00000448192 SLC12A5Q9H2X9 1139 aa24.96■■□□□ 1.59
DDX56-207ENST00000448192 AATKQ6ZMQ8 1374 aa24.95■■□□□ 1.59
DDX56-207ENST00000448192 HDGFL2Q7Z4V5 671 aaPredicted RBP24.95■■□□□ 1.58
DDX56-207ENST00000448192 KCNH5Q8NCM2 988 aa24.95■■□□□ 1.58
DDX56-207ENST00000448192 CD163L1Q9NR16 1453 aa24.95■■□□□ 1.58
DDX56-207ENST00000448192 DEFB132Q7Z7B7 95 aa24.94■■□□□ 1.58
DDX56-207ENST00000448192 TESK2Q96S53 571 aa24.94■■□□□ 1.58
DDX56-207ENST00000448192 COL18A1P39060 1754 aa24.94■■□□□ 1.58
DDX56-207ENST00000448192 BARGINQ6ZT62 677 aa24.93■■□□□ 1.58
DDX56-207ENST00000448192 TCP11L2Q8N4U5 519 aa24.93■■□□□ 1.58
DDX56-207ENST00000448192 ZRANB1Q9UGI0 708 aa24.93■■□□□ 1.58
DDX56-207ENST00000448192 RGPD5Q99666 1765 aa24.93■■□□□ 1.58
DDX56-207ENST00000448192 TERF2IPQ9NYB0 399 aa24.92■■□□□ 1.58
DDX56-207ENST00000448192 PUS7Q96PZ0 661 aaKnown RBP24.91■■□□□ 1.58
DDX56-207ENST00000448192 RGPD1P0DJD0 1748 aa24.91■■□□□ 1.58
DDX56-207ENST00000448192 CRB1P82279 1406 aa24.9■■□□□ 1.58
DDX56-207ENST00000448192 ARHGEF25Q86VW2 580 aa24.9■■□□□ 1.58
DDX56-207ENST00000448192 SLC24A1O60721 1099 aa24.89■■□□□ 1.58
DDX56-207ENST00000448192 NME9Q86XW9 330 aa24.89■■□□□ 1.58
DDX56-207ENST00000448192 AXIN2Q9Y2T1 843 aa24.89■■□□□ 1.58
DDX56-207ENST00000448192 THRAP3Q9Y2W1 955 aaKnown RBP24.89■■□□□ 1.58
DDX56-207ENST00000448192 USP47Q96K76 1375 aa24.89■■□□□ 1.57
DDX56-207ENST00000448192 NFAT5O94916 1531 aa24.88■■□□□ 1.57
DDX56-207ENST00000448192 PDE3BQ13370 1112 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms