RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-208ENST00000447995 PTCRAQ6ISU1 281 aaPredicted RBP6.18□□□□□ -1.42
PTPN12-208ENST00000447995 KIFC2Q96AC6 838 aa6.18□□□□□ -1.42
PTPN12-208ENST00000447995 PCDHGC3Q9UN70 934 aa6.18□□□□□ -1.42
PTPN12-208ENST00000447995 ERICH3Q5RHP9 1530 aa6.17□□□□□ -1.42
PTPN12-208ENST00000447995 SIAH2O43255 324 aa6.17□□□□□ -1.42
PTPN12-208ENST00000447995 SLC24A1O60721 1099 aa6.17□□□□□ -1.42
PTPN12-208ENST00000447995 ALDH1A1P00352 501 aa6.17□□□□□ -1.42
PTPN12-208ENST00000447995 CLIP1P30622 1438 aa6.16□□□□□ -1.42
PTPN12-208ENST00000447995 PRDM2Q13029 1718 aa6.16□□□□□ -1.42
PTPN12-208ENST00000447995 FDX1P10109 184 aa6.16□□□□□ -1.42
PTPN12-208ENST00000447995 TRIM46Q7Z4K8 759 aa6.16□□□□□ -1.42
PTPN12-208ENST00000447995 NUTM1Q86Y26 1132 aa6.16□□□□□ -1.42
PTPN12-208ENST00000447995 STK17AQ9UEE5 414 aa6.16□□□□□ -1.42
PTPN12-208ENST00000447995 KIF27Q86VH2 1401 aa6.16□□□□□ -1.42
PTPN12-208ENST00000447995 CUX1P39880 1505 aa6.15□□□□□ -1.42
PTPN12-208ENST00000447995 CCNYL3P0C7X3 344 aa6.15□□□□□ -1.42
PTPN12-208ENST00000447995 BMP1P13497 986 aa6.15□□□□□ -1.42
PTPN12-208ENST00000447995 SH3BP2P78314 561 aa6.15□□□□□ -1.42
PTPN12-208ENST00000447995 INSM1Q01101 510 aaPredicted RBP6.15□□□□□ -1.42
PTPN12-208ENST00000447995 EHBP1Q8NDI1 1231 aa6.15□□□□□ -1.42
PTPN12-208ENST00000447995 CADPSQ9ULU8 1353 aa6.15□□□□□ -1.43
PTPN12-208ENST00000447995 VPS8Q8N3P4 1428 aa6.15□□□□□ -1.43
PTPN12-208ENST00000447995 C6orf229H3BNL8 230 aa6.14□□□□□ -1.43
PTPN12-208ENST00000447995 MS4A1P11836 297 aa6.14□□□□□ -1.43
PTPN12-208ENST00000447995 PTPRNQ16849 979 aa6.14□□□□□ -1.43
PTPN12-208ENST00000447995 PPARGC1BQ86YN6 1023 aaKnown RBP6.14□□□□□ -1.43
PTPN12-208ENST00000447995 UNC93B1Q9H1C4 597 aa6.14□□□□□ -1.43
PTPN12-208ENST00000447995 TLL2Q9Y6L7 1015 aa6.14□□□□□ -1.43
PTPN12-208ENST00000447995 PRXQ9BXM0 1461 aa6.14□□□□□ -1.43
PTPN12-208ENST00000447995 SPIRE2Q8WWL2 714 aa6.13□□□□□ -1.43
PTPN12-208ENST00000447995 RAPGEF2Q9Y4G8 1499 aa6.13□□□□□ -1.43
PTPN12-208ENST00000447995 MOXD2PA6NHM9 499 aa6.12□□□□□ -1.43
PTPN12-208ENST00000447995 LINC01559Q495D7 138 aa6.12□□□□□ -1.43
PTPN12-208ENST00000447995 CC2D2AQ9P2K1 1620 aa6.12□□□□□ -1.43
PTPN12-208ENST00000447995 CAPN5O15484 640 aaPredicted RBP6.11□□□□□ -1.43
PTPN12-208ENST00000447995 NDUFV2P19404 249 aa6.11□□□□□ -1.43
PTPN12-208ENST00000447995 SSTR3P32745 418 aaPredicted RBP6.11□□□□□ -1.43
PTPN12-208ENST00000447995 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.11□□□□□ -1.43
PTPN12-208ENST00000447995 WASF2Q9Y6W5 498 aa6.11□□□□□ -1.43
PTPN12-208ENST00000447995 KCNH2Q12809 1159 aa6.1□□□□□ -1.43
PTPN12-208ENST00000447995 AMHR2Q16671 573 aa6.1□□□□□ -1.43
PTPN12-208ENST00000447995 KRI1Q8N9T8 703 aaKnown RBP6.1□□□□□ -1.43
PTPN12-208ENST00000447995 ZNF511Q8NB15 262 aa6.1□□□□□ -1.43
PTPN12-208ENST00000447995 PRR7Q8TB68 274 aa6.1□□□□□ -1.43
PTPN12-208ENST00000447995 CCER1Q8TC90 406 aaPredicted RBP6.1□□□□□ -1.43
PTPN12-208ENST00000447995 EVA1BQ9NVM1 165 aa6.1□□□□□ -1.43
PTPN12-208ENST00000447995 MTMR2Q13614 643 aa6.09□□□□□ -1.43
PTPN12-208ENST00000447995 DESI1Q6ICB0 168 aa6.09□□□□□ -1.43
PTPN12-208ENST00000447995 GIGYF2Q6Y7W6 1299 aaKnown RBP6.09□□□□□ -1.43
PTPN12-208ENST00000447995 BAP1Q92560 729 aa6.09□□□□□ -1.43
PTPN12-208ENST00000447995 NXF1Q9UBU9 619 aaKnown RBP6.09□□□□□ -1.43
PTPN12-208ENST00000447995 LORP23490 312 aaPredicted RBP6.08□□□□□ -1.44
PTPN12-208ENST00000447995 GMPRP36959 345 aa6.08□□□□□ -1.44
PTPN12-208ENST00000447995 TTLL12Q14166 644 aaPredicted RBP6.08□□□□□ -1.44
PTPN12-208ENST00000447995 BARGINQ6ZT62 677 aa6.08□□□□□ -1.44
PTPN12-208ENST00000447995 CUX2O14529 1486 aa6.08□□□□□ -1.44
PTPN12-208ENST00000447995 FANCD2Q9BXW9 1451 aa6.08□□□□□ -1.44
PTPN12-208ENST00000447995 H3BM21 787 aa6.07□□□□□ -1.44
PTPN12-208ENST00000447995 NNTQ13423 1086 aa6.07□□□□□ -1.44
PTPN12-208ENST00000447995 NPAS3Q8IXF0 933 aa6.07□□□□□ -1.44
PTPN12-208ENST00000447995 MPNDQ8N594 471 aa6.07□□□□□ -1.44
PTPN12-208ENST00000447995 SLC16A10Q8TF71 515 aa6.07□□□□□ -1.44
PTPN12-208ENST00000447995 DNMBPQ6XZF7 1577 aa6.06□□□□□ -1.44
PTPN12-208ENST00000447995 ERBB4Q15303 1308 aa6.06□□□□□ -1.44
PTPN12-208ENST00000447995 SPDYE5A6NIY4 337 aa6.06□□□□□ -1.44
PTPN12-208ENST00000447995 ZMYND10O75800 440 aa6.06□□□□□ -1.44
PTPN12-208ENST00000447995 TIMP2P16035 220 aa6.06□□□□□ -1.44
PTPN12-208ENST00000447995 VARSP26640 1264 aaKnown RBP6.06□□□□□ -1.44
PTPN12-208ENST00000447995 VEGFBP49765 207 aa6.06□□□□□ -1.44
PTPN12-208ENST00000447995 RSBN1LQ6PCB5 846 aaPredicted RBP6.06□□□□□ -1.44
PTPN12-208ENST00000447995 ZFP42Q96MM3 310 aa6.06□□□□□ -1.44
PTPN12-208ENST00000447995 FGD5Q6ZNL6 1462 aa6.06□□□□□ -1.44
PTPN12-208ENST00000447995 TTBK1Q5TCY1 1321 aaPredicted RBP6.05□□□□□ -1.44
PTPN12-208ENST00000447995 ARAP1Q96P48 1450 aa6.05□□□□□ -1.44
PTPN12-208ENST00000447995 CFAP99D6REC4 459 aa6.05□□□□□ -1.44
PTPN12-208ENST00000447995 F12P00748 615 aaPredicted RBP6.05□□□□□ -1.44
PTPN12-208ENST00000447995 GJA5P36382 358 aa6.05□□□□□ -1.44
PTPN12-208ENST00000447995 PARP9Q8IXQ6 854 aa6.05□□□□□ -1.44
PTPN12-208ENST00000447995 IRF7Q92985 503 aa6.05□□□□□ -1.44
PTPN12-208ENST00000447995 BEGAINQ9BUH8 593 aa6.05□□□□□ -1.44
PTPN12-208ENST00000447995 TBC1D2Q9BYX2 928 aa6.05□□□□□ -1.44
PTPN12-208ENST00000447995 LAMC3Q9Y6N6 1575 aa6.05□□□□□ -1.44
PTPN12-208ENST00000447995 IGF1RP08069 1367 aa6.05□□□□□ -1.44
PTPN12-208ENST00000447995 PLEKHG3A1L390 1219 aa6.04□□□□□ -1.44
PTPN12-208ENST00000447995 ADH1CP00326 375 aa6.04□□□□□ -1.44
PTPN12-208ENST00000447995 MRPL14Q6P1L8 145 aaKnown RBP6.04□□□□□ -1.44
PTPN12-208ENST00000447995 LYPD8Q6UX82 237 aa6.04□□□□□ -1.44
PTPN12-208ENST00000447995 MAP10Q9P2G4 905 aa6.04□□□□□ -1.44
PTPN12-208ENST00000447995 CARMIL1Q5VZK9 1371 aa6.04□□□□□ -1.44
PTPN12-208ENST00000447995 WDR4P57081 412 aaKnown RBP6.03□□□□□ -1.44
PTPN12-208ENST00000447995 ZC3H15Q8WU90 426 aaKnown RBP6.03□□□□□ -1.44
PTPN12-208ENST00000447995 KLF16Q9BXK1 252 aaPredicted RBP6.03□□□□□ -1.44
PTPN12-208ENST00000447995 ABCA10Q8WWZ4 1543 aa6.03□□□□□ -1.44
PTPN12-208ENST00000447995 PDS5BQ9NTI5 1447 aa6.02□□□□□ -1.45
PTPN12-208ENST00000447995 SOBPA7XYQ1 873 aa6.02□□□□□ -1.45
PTPN12-208ENST00000447995 SPTLC1O15269 473 aa6.02□□□□□ -1.45
PTPN12-208ENST00000447995 CTHP32929 405 aa6.02□□□□□ -1.45
PTPN12-208ENST00000447995 RANGAP1P46060 587 aaPredicted RBP6.02□□□□□ -1.45
PTPN12-208ENST00000447995 ZSCAN1Q8NBB4 408 aa6.02□□□□□ -1.45
PTPN12-208ENST00000447995 FAM174AQ8TBP5 190 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms