RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 FYB1O15117 783 aa26.55■■□□□ 1.84
SGCE-207ENST00000447873 BRINP3Q76B58 766 aa26.55■■□□□ 1.84
SGCE-207ENST00000447873 BRD4O60885 1362 aaPredicted RBP26.54■■□□□ 1.84
SGCE-207ENST00000447873 GGNBP2Q9H3C7 697 aa26.54■■□□□ 1.84
SGCE-207ENST00000447873 TTC21AQ8NDW8 1320 aa26.53■■□□□ 1.84
SGCE-207ENST00000447873 ANKRD26Q9UPS8 1709 aa26.53■■□□□ 1.84
SGCE-207ENST00000447873 MORC1Q86VD1 984 aa26.52■■□□□ 1.84
SGCE-207ENST00000447873 NME9Q86XW9 330 aa26.52■■□□□ 1.84
SGCE-207ENST00000447873 IQSEC2Q5JU85 1478 aa26.51■■□□□ 1.83
SGCE-207ENST00000447873 PAK3O75914 559 aaPredicted RBP26.51■■□□□ 1.83
SGCE-207ENST00000447873 NPHP3Q7Z494 1330 aa26.51■■□□□ 1.83
SGCE-207ENST00000447873 XPCQ01831 940 aaPredicted RBP26.5■■□□□ 1.83
SGCE-207ENST00000447873 KRT28Q7Z3Y7 464 aa26.5■■□□□ 1.83
SGCE-207ENST00000447873 TOM1O60784 492 aa26.49■■□□□ 1.83
SGCE-207ENST00000447873 CERKQ8TCT0 537 aa26.49■■□□□ 1.83
SGCE-207ENST00000447873 MYBBP1AQ9BQG0 1328 aaKnown RBP26.48■■□□□ 1.83
SGCE-207ENST00000447873 DDX17Q92841 729 aaKnown RBP26.47■■□□□ 1.83
SGCE-207ENST00000447873 COG3Q96JB2 828 aa26.46■■□□□ 1.83
SGCE-207ENST00000447873 TRPM3Q9HCF6 1732 aaPredicted RBP26.46■■□□□ 1.83
SGCE-207ENST00000447873 ABTB2Q8N961 1025 aa26.46■■□□□ 1.83
SGCE-207ENST00000447873 ZRANB1Q9UGI0 708 aa26.46■■□□□ 1.83
SGCE-207ENST00000447873 PIK3C2AO00443 1686 aa26.45■■□□□ 1.83
SGCE-207ENST00000447873 ROBO1Q9Y6N7 1651 aa26.45■■□□□ 1.83
SGCE-207ENST00000447873 CCER2I3L3R5 266 aa26.45■■□□□ 1.82
SGCE-207ENST00000447873 TNNT2P45379 298 aaPredicted RBP26.44■■□□□ 1.82
SGCE-207ENST00000447873 PXDNQ92626 1479 aa26.43■■□□□ 1.82
SGCE-207ENST00000447873 UBAP1LF5GYI3 381 aa26.42■■□□□ 1.82
SGCE-207ENST00000447873 NHSL1Q5SYE7 1610 aa26.42■■□□□ 1.82
SGCE-207ENST00000447873 USP31Q70CQ4 1352 aa26.42■■□□□ 1.82
SGCE-207ENST00000447873 PPP2R1AP30153 589 aa26.41■■□□□ 1.82
SGCE-207ENST00000447873 NLRP6P59044 892 aa26.41■■□□□ 1.82
SGCE-207ENST00000447873 SBNO1A3KN83 1393 aa26.41■■□□□ 1.82
SGCE-207ENST00000447873 OVOS2A0A0J9YW53 1432 aa26.4■■□□□ 1.82
SGCE-207ENST00000447873 OVOS2Q6IE36 1432 aa26.4■■□□□ 1.82
SGCE-207ENST00000447873 LMOD2Q6P5Q4 547 aa26.4■■□□□ 1.82
SGCE-207ENST00000447873 NLRP13Q86W25 1043 aa26.4■■□□□ 1.82
SGCE-207ENST00000447873 NUTM2GQ5VZR2 741 aa26.39■■□□□ 1.82
SGCE-207ENST00000447873 SOS2Q07890 1332 aaPredicted RBP26.38■■□□□ 1.81
SGCE-207ENST00000447873 PIP4K2BP78356 416 aa26.38■■□□□ 1.81
SGCE-207ENST00000447873 USP54Q70EL1 1684 aa26.37■■□□□ 1.81
SGCE-207ENST00000447873 ALS2Q96Q42 1657 aa26.37■■□□□ 1.81
SGCE-207ENST00000447873 SCAF1Q9H7N4 1312 aaKnown RBP26.37■■□□□ 1.81
SGCE-207ENST00000447873 TNS3Q68CZ2 1445 aa26.36■■□□□ 1.81
SGCE-207ENST00000447873 MARF1Q9Y4F3 1742 aaKnown RBP26.36■■□□□ 1.81
SGCE-207ENST00000447873 MRS2Q9HD23 443 aa26.35■■□□□ 1.81
SGCE-207ENST00000447873 SPATA31A3Q5VYP0 1347 aa26.34■■□□□ 1.81
SGCE-207ENST00000447873 AHDC1Q5TGY3 1603 aaPredicted RBP26.33■■□□□ 1.81
SGCE-207ENST00000447873 CCDC184Q52MB2 194 aa26.33■■□□□ 1.81
SGCE-207ENST00000447873 MAP2P11137 1827 aaKnown RBP26.33■■□□□ 1.81
SGCE-207ENST00000447873 ARHGEF10O15013 1369 aa26.31■■□□□ 1.8
SGCE-207ENST00000447873 AATKQ6ZMQ8 1374 aa26.31■■□□□ 1.8
SGCE-207ENST00000447873 SOX12O15370 315 aa26.3■■□□□ 1.8
SGCE-207ENST00000447873 FBLN1P23142 703 aa26.3■■□□□ 1.8
SGCE-207ENST00000447873 MTHFSP49914 203 aa26.29■■□□□ 1.8
SGCE-207ENST00000447873 PHLPP1O60346 1717 aa26.28■■□□□ 1.8
SGCE-207ENST00000447873 PLEKHG5O94827 1062 aa26.27■■□□□ 1.8
SGCE-207ENST00000447873 KCNH5Q8NCM2 988 aa26.27■■□□□ 1.8
SGCE-207ENST00000447873 POLKQ9UBT6 870 aa26.26■■□□□ 1.79
SGCE-207ENST00000447873 RRS1Q15050 365 aaKnown RBP26.25■■□□□ 1.79
SGCE-207ENST00000447873 LRRC59Q96AG4 307 aaKnown RBP26.25■■□□□ 1.79
SGCE-207ENST00000447873 USP19O94966 1318 aa26.25■■□□□ 1.79
SGCE-207ENST00000447873 SLIT3O75094 1523 aa26.25■■□□□ 1.79
SGCE-207ENST00000447873 PPM1GO15355 546 aaPredicted RBP26.24■■□□□ 1.79
SGCE-207ENST00000447873 CFAP53Q96M91 514 aa26.24■■□□□ 1.79
SGCE-207ENST00000447873 EMILIN1Q9Y6C2 1016 aa26.23■■□□□ 1.79
SGCE-207ENST00000447873 MED1Q15648 1581 aaPredicted RBP26.23■■□□□ 1.79
SGCE-207ENST00000447873 GCP02774 474 aa26.22■■□□□ 1.79
SGCE-207ENST00000447873 SMG6Q86US8 1419 aaKnown RBP26.21■■□□□ 1.79
SGCE-207ENST00000447873 COL16A1Q07092 1604 aaPredicted RBP26.21■■□□□ 1.79
SGCE-207ENST00000447873 NFAT5O94916 1531 aa26.21■■□□□ 1.79
SGCE-207ENST00000447873 PHRF1Q9P1Y6 1649 aaKnown RBP26.2■■□□□ 1.78
SGCE-207ENST00000447873 LTN1O94822 1766 aa26.2■■□□□ 1.78
SGCE-207ENST00000447873 CRYBG1Q9Y4K1 1723 aa26.19■■□□□ 1.78
SGCE-207ENST00000447873 MAP3K19Q56UN5 1328 aa26.19■■□□□ 1.78
SGCE-207ENST00000447873 CABLES1Q8TDN4 633 aa26.19■■□□□ 1.78
SGCE-207ENST00000447873 PNISRQ8TF01 805 aaKnown RBP26.18■■□□□ 1.78
SGCE-207ENST00000447873 CDK12Q9NYV4 1490 aaPredicted RBP26.18■■□□□ 1.78
SGCE-207ENST00000447873 AMPHP49418 695 aa26.16■■□□□ 1.78
SGCE-207ENST00000447873 FAM9BQ8IZU0 186 aa26.16■■□□□ 1.78
SGCE-207ENST00000447873 PNPLA6Q8IY17 1366 aa26.16■■□□□ 1.78
SGCE-207ENST00000447873 PEAK1Q9H792 1746 aa26.15■■□□□ 1.78
SGCE-207ENST00000447873 HAP1P54257 671 aaPredicted RBP26.14■■□□□ 1.78
SGCE-207ENST00000447873 INSRP06213 1382 aa26.14■■□□□ 1.77
SGCE-207ENST00000447873 FLT4P35916 1363 aa26.14■■□□□ 1.77
SGCE-207ENST00000447873 KIF24Q5T7B8 1368 aa26.14■■□□□ 1.77
SGCE-207ENST00000447873 ZBTB7CA1YPR0 619 aa26.13■■□□□ 1.77
SGCE-207ENST00000447873 ABCA3Q99758 1704 aa26.13■■□□□ 1.77
SGCE-207ENST00000447873 COL3A1P02461 1466 aaPredicted RBP26.13■■□□□ 1.77
SGCE-207ENST00000447873 COL22A1Q8NFW1 1626 aaPredicted RBP26.12■■□□□ 1.77
SGCE-207ENST00000447873 ZC3H6P61129 1189 aaKnown RBP26.12■■□□□ 1.77
SGCE-207ENST00000447873 WDR43Q15061 677 aaKnown RBP eCLIP26.12■■□□□ 1.77
SGCE-207ENST00000447873 DIAPH1O60610 1272 aaKnown RBP26.12■■□□□ 1.77
SGCE-207ENST00000447873 ARHGEF25Q86VW2 580 aa26.12■■□□□ 1.77
SGCE-207ENST00000447873 SHPRHQ149N8 1683 aa26.11■■□□□ 1.77
SGCE-207ENST00000447873 RTL1A6NKG5 1358 aa26.11■■□□□ 1.77
SGCE-207ENST00000447873 HSP90AB2PQ58FF8 381 aa26.1■■□□□ 1.77
SGCE-207ENST00000447873 HOXC9P31274 260 aa26.09■■□□□ 1.77
SGCE-207ENST00000447873 NUDCQ9Y266 331 aa26.09■■□□□ 1.77
SGCE-207ENST00000447873 IP6K1Q92551 441 aa26.07■■□□□ 1.76
SGCE-207ENST00000447873 CPDO75976 1380 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms