RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 KCNC4Q03721 635 aa9.04□□□□□ -0.96
SDCBP-205ENST00000447267 AFAP1Q8N556 730 aa9.04□□□□□ -0.96
SDCBP-205ENST00000447267 ZNF516Q92618 1163 aa9.04□□□□□ -0.96
SDCBP-205ENST00000447267 MTRQ99707 1265 aa9.03□□□□□ -0.96
SDCBP-205ENST00000447267 NPATQ14207 1427 aa9.03□□□□□ -0.96
SDCBP-205ENST00000447267 FAM135BQ49AJ0 1406 aa9.03□□□□□ -0.96
SDCBP-205ENST00000447267 VWDEQ8N2E2 1590 aa9.02□□□□□ -0.97
SDCBP-205ENST00000447267 FCHSD2O94868 740 aa9.01□□□□□ -0.97
SDCBP-205ENST00000447267 RGS12O14924 1447 aa8.99□□□□□ -0.97
SDCBP-205ENST00000447267 KIF27Q86VH2 1401 aa8.99□□□□□ -0.97
SDCBP-205ENST00000447267 LRP6O75581 1613 aa8.99□□□□□ -0.97
SDCBP-205ENST00000447267 RCCD1A6NED2 376 aa8.99□□□□□ -0.97
SDCBP-205ENST00000447267 RGS20O76081 388 aa8.99□□□□□ -0.97
SDCBP-205ENST00000447267 ANKLE2Q86XL3 938 aa8.99□□□□□ -0.97
SDCBP-205ENST00000447267 NKX2-3Q8TAU0 364 aa8.99□□□□□ -0.97
SDCBP-205ENST00000447267 TMEM134Q9H6X4 195 aa8.99□□□□□ -0.97
SDCBP-205ENST00000447267 JCADQ9P266 1359 aa8.99□□□□□ -0.97
SDCBP-205ENST00000447267 CDK12Q9NYV4 1490 aaPredicted RBP8.98□□□□□ -0.97
SDCBP-205ENST00000447267 SLF2Q8IX21 1173 aa8.98□□□□□ -0.97
SDCBP-205ENST00000447267 QTRT2Q9H974 415 aaKnown RBP8.98□□□□□ -0.97
SDCBP-205ENST00000447267 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.98□□□□□ -0.97
SDCBP-205ENST00000447267 DNAJB2P25686 324 aa8.97□□□□□ -0.97
SDCBP-205ENST00000447267 PXYLP1Q8TE99 480 aa8.97□□□□□ -0.97
SDCBP-205ENST00000447267 CNTLNQ9NXG0 1405 aa8.97□□□□□ -0.97
SDCBP-205ENST00000447267 CEP170BQ9Y4F5 1589 aaPredicted RBP8.96□□□□□ -0.97
SDCBP-205ENST00000447267 PLEKHD1A6NEE1 506 aa8.96□□□□□ -0.98
SDCBP-205ENST00000447267 SLC10A3P09131 477 aa8.96□□□□□ -0.98
SDCBP-205ENST00000447267 RBM46Q8TBY0 533 aaKnown RBP8.96□□□□□ -0.98
SDCBP-205ENST00000447267 IL21Q9HBE4 155 aa8.96□□□□□ -0.98
SDCBP-205ENST00000447267 AFF2P51816 1311 aa8.96□□□□□ -0.98
SDCBP-205ENST00000447267 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.96□□□□□ -0.98
SDCBP-205ENST00000447267 NEURL4Q96JN8 1562 aa8.95□□□□□ -0.98
SDCBP-205ENST00000447267 HDGFP51858 240 aaKnown RBP8.95□□□□□ -0.98
SDCBP-205ENST00000447267 C1QTNF8P60827 252 aa8.95□□□□□ -0.98
SDCBP-205ENST00000447267 COPS2P61201 443 aa8.95□□□□□ -0.98
SDCBP-205ENST00000447267 RBM6P78332 1123 aaKnown RBP8.95□□□□□ -0.98
SDCBP-205ENST00000447267 ATAD2Q6PL18 1390 aa8.95□□□□□ -0.98
SDCBP-205ENST00000447267 NPHP4O75161 1426 aaPredicted RBP8.95□□□□□ -0.98
SDCBP-205ENST00000447267 HIC1Q14526 733 aa8.94□□□□□ -0.98
SDCBP-205ENST00000447267 NLRP7Q8WX94 980 aa8.94□□□□□ -0.98
SDCBP-205ENST00000447267 RNF17Q9BXT8 1623 aaKnown RBP8.94□□□□□ -0.98
SDCBP-205ENST00000447267 HRCP23327 699 aa8.93□□□□□ -0.98
SDCBP-205ENST00000447267 DEFB132Q7Z7B7 95 aa8.93□□□□□ -0.98
SDCBP-205ENST00000447267 METTL3Q86U44 580 aaKnown RBP8.93□□□□□ -0.98
SDCBP-205ENST00000447267 FAM9AQ8IZU1 332 aaPredicted RBP8.93□□□□□ -0.98
SDCBP-205ENST00000447267 PHOX2BQ99453 314 aa8.93□□□□□ -0.98
SDCBP-205ENST00000447267 PPP1R18Q6NYC8 613 aa8.92□□□□□ -0.98
SDCBP-205ENST00000447267 BLOC1S3Q6QNY0 202 aa8.92□□□□□ -0.98
SDCBP-205ENST00000447267 VSIG10Q8N0Z9 540 aa8.92□□□□□ -0.98
SDCBP-205ENST00000447267 ZNF784Q8NCA9 323 aaPredicted RBP8.92□□□□□ -0.98
SDCBP-205ENST00000447267 AGLP35573 1532 aa8.91□□□□□ -0.98
SDCBP-205ENST00000447267 A2ML1A8K2U0 1454 aa8.91□□□□□ -0.98
SDCBP-205ENST00000447267 SPATA31A6Q5VVP1 1343 aa8.91□□□□□ -0.98
SDCBP-205ENST00000447267 GNPATO15228 680 aa8.91□□□□□ -0.98
SDCBP-205ENST00000447267 FBXO31Q5XUX0 539 aaPredicted RBP8.91□□□□□ -0.98
SDCBP-205ENST00000447267 STRCP1A6NGW2 1772 aa8.91□□□□□ -0.98
SDCBP-205ENST00000447267 MYO3AQ8NEV4 1616 aa8.91□□□□□ -0.98
SDCBP-205ENST00000447267 PLCH2O75038 1416 aa8.9□□□□□ -0.98
SDCBP-205ENST00000447267 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.9□□□□□ -0.98
SDCBP-205ENST00000447267 EFCAB2Q5VUJ9 269 aa8.9□□□□□ -0.98
SDCBP-205ENST00000447267 CFHP08603 1231 aa8.89□□□□□ -0.99
SDCBP-205ENST00000447267 SMYD5Q6GMV2 418 aa8.89□□□□□ -0.99
SDCBP-205ENST00000447267 DNMT1P26358 1616 aaKnown RBP8.89□□□□□ -0.99
SDCBP-205ENST00000447267 GOLGA3Q08378 1498 aa8.89□□□□□ -0.99
SDCBP-205ENST00000447267 LRP5O75197 1615 aa8.88□□□□□ -0.99
SDCBP-205ENST00000447267 DIP2CQ9Y2E4 1556 aa8.88□□□□□ -0.99
SDCBP-205ENST00000447267 TLL1O43897 1013 aa8.88□□□□□ -0.99
SDCBP-205ENST00000447267 ZPR1O75312 459 aa8.88□□□□□ -0.99
SDCBP-205ENST00000447267 OATP04181 439 aa8.88□□□□□ -0.99
SDCBP-205ENST00000447267 CCDC125Q86Z20 511 aa8.88□□□□□ -0.99
SDCBP-205ENST00000447267 THEMISQ8N1K5 641 aaPredicted RBP8.88□□□□□ -0.99
SDCBP-205ENST00000447267 IRX2Q9BZI1 471 aaPredicted RBP8.88□□□□□ -0.99
SDCBP-205ENST00000447267 PCDHB3Q9Y5E6 796 aa8.88□□□□□ -0.99
SDCBP-205ENST00000447267 SUPT6HQ7KZ85 1726 aaKnown RBP8.88□□□□□ -0.99
SDCBP-205ENST00000447267 ZNF142P52746 1687 aaPredicted RBP8.88□□□□□ -0.99
SDCBP-205ENST00000447267 RAPGEF6Q8TEU7 1601 aa8.87□□□□□ -0.99
SDCBP-205ENST00000447267 CFAP74Q9C0B2 1584 aa8.87□□□□□ -0.99
SDCBP-205ENST00000447267 ACTN4O43707 911 aaKnown RBP8.87□□□□□ -0.99
SDCBP-205ENST00000447267 GGT6Q6P531 493 aa8.87□□□□□ -0.99
SDCBP-205ENST00000447267 C8orf37Q96NL8 207 aa8.87□□□□□ -0.99
SDCBP-205ENST00000447267 ROBO1Q9Y6N7 1651 aa8.86□□□□□ -0.99
SDCBP-205ENST00000447267 GPIHBP1Q8IV16 184 aa8.86□□□□□ -0.99
SDCBP-205ENST00000447267 NECTIN2Q92692 538 aa8.86□□□□□ -0.99
SDCBP-205ENST00000447267 EMID1Q96A84 441 aaPredicted RBP8.86□□□□□ -0.99
SDCBP-205ENST00000447267 SLAIN2Q9P270 581 aa8.86□□□□□ -0.99
SDCBP-205ENST00000447267 NGLY1Q96IV0 654 aa8.85□□□□□ -0.99
SDCBP-205ENST00000447267 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.85□□□□□ -0.99
SDCBP-205ENST00000447267 TMEM94Q12767 1356 aa8.85□□□□□ -0.99
SDCBP-205ENST00000447267 CDK13Q14004 1512 aaKnown RBP8.85□□□□□ -0.99
SDCBP-205ENST00000447267 MED14O60244 1454 aa8.84□□□□□ -0.99
SDCBP-205ENST00000447267 PRKD2Q9BZL6 878 aa8.84□□□□□ -0.99
SDCBP-205ENST00000447267 ZNF518AQ6AHZ1 1483 aa8.83□□□□□ -1
SDCBP-205ENST00000447267 LCE2BO14633 110 aa8.83□□□□□ -1
SDCBP-205ENST00000447267 SLC4A3P48751 1232 aa8.83□□□□□ -1
SDCBP-205ENST00000447267 ABCC1P33527 1531 aa8.82□□□□□ -1
SDCBP-205ENST00000447267 PUS10Q3MIT2 529 aaKnown RBP8.82□□□□□ -1
SDCBP-205ENST00000447267 PROSER2Q86WR7 435 aaPredicted RBP8.82□□□□□ -1
SDCBP-205ENST00000447267 PRR14Q9BWN1 585 aa8.82□□□□□ -1
SDCBP-205ENST00000447267 ABCA6Q8N139 1617 aa8.82□□□□□ -1
SDCBP-205ENST00000447267 TNRQ92752 1358 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms