RNA–Protein interactions for RNA: ENST00000446182.5

PTPRN-208, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 5

Gene PTPRN, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-208ENST00000446182 A0A0G2JS52 829 aa15.39■□□□□ 0.05
PTPRN-208ENST00000446182 MYT1Q01538 1121 aa15.39■□□□□ 0.05
PTPRN-208ENST00000446182 COL14A1Q05707 1796 aaKnown RBP15.39■□□□□ 0.05
PTPRN-208ENST00000446182 NGDNQ8NEJ9 315 aaKnown RBP15.38■□□□□ 0.05
PTPRN-208ENST00000446182 ATP7BP35670 1465 aa15.38■□□□□ 0.05
PTPRN-208ENST00000446182 SPATA31A5Q5VU36 1347 aa15.37■□□□□ 0.05
PTPRN-208ENST00000446182 SPATA31A7Q8IWB4 1347 aa15.37■□□□□ 0.05
PTPRN-208ENST00000446182 CRYBG1Q9Y4K1 1723 aa15.37■□□□□ 0.05
PTPRN-208ENST00000446182 PAK3O75914 559 aaPredicted RBP15.36■□□□□ 0.05
PTPRN-208ENST00000446182 ARHGEF28Q8N1W1 1705 aaKnown RBP15.35■□□□□ 0.05
PTPRN-208ENST00000446182 HRCP23327 699 aa15.35■□□□□ 0.05
PTPRN-208ENST00000446182 BAG6P46379 1132 aa15.35■□□□□ 0.05
PTPRN-208ENST00000446182 NUDT16Q96DE0 195 aaKnown RBP15.35■□□□□ 0.05
PTPRN-208ENST00000446182 PRDM11Q9NQV5 511 aa15.35■□□□□ 0.05
PTPRN-208ENST00000446182 THSD7AQ9UPZ6 1657 aa15.33■□□□□ 0.04
PTPRN-208ENST00000446182 KIAA0232Q92628 1395 aa15.33■□□□□ 0.04
PTPRN-208ENST00000446182 FAM182BQ5T319 152 aa15.32■□□□□ 0.04
PTPRN-208ENST00000446182 CDK19Q9BWU1 502 aa15.32■□□□□ 0.04
PTPRN-208ENST00000446182 ITSN1Q15811 1721 aa15.31■□□□□ 0.04
PTPRN-208ENST00000446182 CHRNA2Q15822 529 aa15.31■□□□□ 0.04
PTPRN-208ENST00000446182 IFFO2Q5TF58 517 aa15.31■□□□□ 0.04
PTPRN-208ENST00000446182 SPATA31A1Q5TZJ5 1347 aa15.31■□□□□ 0.04
PTPRN-208ENST00000446182 POLR3AO14802 1390 aaPredicted RBP15.31■□□□□ 0.04
PTPRN-208ENST00000446182 LRP5O75197 1615 aa15.31■□□□□ 0.04
PTPRN-208ENST00000446182 PSDA5PKW4 1024 aaPredicted RBP15.3■□□□□ 0.04
PTPRN-208ENST00000446182 DISP2A7MBM2 1401 aa15.3■□□□□ 0.04
PTPRN-208ENST00000446182 EN1Q05925 392 aaPredicted RBP15.3■□□□□ 0.04
PTPRN-208ENST00000446182 PHRF1Q9P1Y6 1649 aaKnown RBP15.3■□□□□ 0.04
PTPRN-208ENST00000446182 ACEP12821 1306 aa15.29■□□□□ 0.04
PTPRN-208ENST00000446182 CCDC61Q9Y6R9 512 aa15.29■□□□□ 0.04
PTPRN-208ENST00000446182 RGPD1P0DJD0 1748 aa15.29■□□□□ 0.04
PTPRN-208ENST00000446182 TOPAZ1Q8N9V7 1692 aa15.28■□□□□ 0.04
PTPRN-208ENST00000446182 PLEKHG3A1L390 1219 aa15.28■□□□□ 0.04
PTPRN-208ENST00000446182 ZC3H6P61129 1189 aaKnown RBP15.28■□□□□ 0.04
PTPRN-208ENST00000446182 NBPF8Q3BBV2 869 aa15.28■□□□□ 0.04
PTPRN-208ENST00000446182 NUTM2GQ5VZR2 741 aa15.28■□□□□ 0.04
PTPRN-208ENST00000446182 STRN4Q9NRL3 753 aa15.28■□□□□ 0.04
PTPRN-208ENST00000446182 TNS1Q9HBL0 1735 aaKnown RBP15.26■□□□□ 0.03
PTPRN-208ENST00000446182 KIAA1210Q9ULL0 1709 aa15.26■□□□□ 0.03
PTPRN-208ENST00000446182 SSH2Q76I76 1423 aa15.26■□□□□ 0.03
PTPRN-208ENST00000446182 USP19O94966 1318 aa15.25■□□□□ 0.03
PTPRN-208ENST00000446182 NRKQ7Z2Y5 1582 aa15.25■□□□□ 0.03
PTPRN-208ENST00000446182 NBPF1Q3BBV0 1214 aa15.25■□□□□ 0.03
PTPRN-208ENST00000446182 CPDO75976 1380 aa15.24■□□□□ 0.03
PTPRN-208ENST00000446182 EZH2Q15910 746 aaKnown RBP15.24■□□□□ 0.03
PTPRN-208ENST00000446182 FAM196AQ6ZSG2 479 aa15.24■□□□□ 0.03
PTPRN-208ENST00000446182 BARGINQ6ZT62 677 aa15.24■□□□□ 0.03
PTPRN-208ENST00000446182 CAMTA1Q9Y6Y1 1673 aa15.23■□□□□ 0.03
PTPRN-208ENST00000446182 TRIM37O94972 964 aa15.23■□□□□ 0.03
PTPRN-208ENST00000446182 R3HDM1Q15032 1099 aaKnown RBP15.23■□□□□ 0.03
PTPRN-208ENST00000446182 ABTB2Q8N961 1025 aa15.23■□□□□ 0.03
PTPRN-208ENST00000446182 USP35Q9P2H5 1018 aa15.23■□□□□ 0.03
PTPRN-208ENST00000446182 EVA1CP58658 441 aa15.22■□□□□ 0.03
PTPRN-208ENST00000446182 LARP1Q6PKG0 1096 aaKnown RBP15.22■□□□□ 0.03
PTPRN-208ENST00000446182 CAMKK2Q96RR4 588 aa15.22■□□□□ 0.03
PTPRN-208ENST00000446182 LMO7Q8WWI1 1683 aa15.22■□□□□ 0.03
PTPRN-208ENST00000446182 CENPJQ9HC77 1338 aaPredicted RBP15.21■□□□□ 0.03
PTPRN-208ENST00000446182 PPIP5K1Q6PFW1 1433 aa15.21■□□□□ 0.03
PTPRN-208ENST00000446182 SRPK2P78362 688 aaKnown RBP15.21■□□□□ 0.03
PTPRN-208ENST00000446182 NLRP13Q86W25 1043 aa15.2■□□□□ 0.02
PTPRN-208ENST00000446182 TCP11L2Q8N4U5 519 aa15.2■□□□□ 0.02
PTPRN-208ENST00000446182 APBA3O96018 575 aa15.19■□□□□ 0.02
PTPRN-208ENST00000446182 GCP02774 474 aa15.19■□□□□ 0.02
PTPRN-208ENST00000446182 PDE3BQ13370 1112 aa15.19■□□□□ 0.02
PTPRN-208ENST00000446182 CABP2Q9NPB3 220 aa15.19■□□□□ 0.02
PTPRN-208ENST00000446182 BRD4O60885 1362 aaPredicted RBP15.19■□□□□ 0.02
PTPRN-208ENST00000446182 PARD3Q8TEW0 1356 aa15.19■□□□□ 0.02
PTPRN-208ENST00000446182 THRAP3Q9Y2W1 955 aaKnown RBP15.18■□□□□ 0.02
PTPRN-208ENST00000446182 COL5A2P05997 1499 aaPredicted RBP15.18■□□□□ 0.02
PTPRN-208ENST00000446182 USP6P35125 1406 aa15.17■□□□□ 0.02
PTPRN-208ENST00000446182 CABP1Q9NZU7 370 aa15.15■□□□□ 0.02
PTPRN-208ENST00000446182 QRICH2Q9H0J4 1663 aa15.15■□□□□ 0.02
PTPRN-208ENST00000446182 AATKQ6ZMQ8 1374 aa15.14■□□□□ 0.01
PTPRN-208ENST00000446182 SLIT3O75094 1523 aa15.14■□□□□ 0.01
PTPRN-208ENST00000446182 RREB1Q92766 1687 aa15.14■□□□□ 0.01
PTPRN-208ENST00000446182 NLRP6P59044 892 aa15.14■□□□□ 0.01
PTPRN-208ENST00000446182 CRB1P82279 1406 aa15.14■□□□□ 0.01
PTPRN-208ENST00000446182 PARP4Q9UKK3 1724 aaKnown RBP15.13■□□□□ 0.01
PTPRN-208ENST00000446182 ZBTB7CA1YPR0 619 aa15.12■□□□□ 0.01
PTPRN-208ENST00000446182 L3MBTL2Q969R5 705 aa15.12■□□□□ 0.01
PTPRN-208ENST00000446182 NUP188Q5SRE5 1749 aa15.12■□□□□ 0.01
PTPRN-208ENST00000446182 EVC2Q86UK5 1308 aa15.11■□□□□ 0.01
PTPRN-208ENST00000446182 OVOS2A0A0G2JMS6 1433 aa15.1■□□□□ 0.01
PTPRN-208ENST00000446182 OVOS2A0A0J9YW53 1432 aa15.1■□□□□ 0.01
PTPRN-208ENST00000446182 OVOS2Q6IE36 1432 aa15.1■□□□□ 0.01
PTPRN-208ENST00000446182 PIK3C2AO00443 1686 aa15.1■□□□□ 0.01
PTPRN-208ENST00000446182 C11orf95C9JLR9 678 aaPredicted RBP15.1■□□□□ 0.01
PTPRN-208ENST00000446182 NBPF14Q5TI25 921 aa15.1■□□□□ 0.01
PTPRN-208ENST00000446182 PEAK1Q9H792 1746 aa15.09■□□□□ 0.01
PTPRN-208ENST00000446182 CPSF1Q10570 1443 aaKnown RBP15.09■□□□□ 0.01
PTPRN-208ENST00000446182 COL18A1P39060 1754 aa15.08■□□□□ 0.01
PTPRN-208ENST00000446182 LRRC37A3O60309 1634 aa15.08■□□□□ 0
PTPRN-208ENST00000446182 TOM1L2Q6ZVM7 507 aa15.08■□□□□ 0
PTPRN-208ENST00000446182 AXIN2Q9Y2T1 843 aa15.08■□□□□ 0
PTPRN-208ENST00000446182 TRPM1Q7Z4N2 1603 aa15.07■□□□□ 0
PTPRN-208ENST00000446182 DDB1Q16531 1140 aa15.07■□□□□ 0
PTPRN-208ENST00000446182 ARHGEF25Q86VW2 580 aa15.07■□□□□ 0
PTPRN-208ENST00000446182 TTC21BQ7Z4L5 1316 aa15.07■□□□□ 0
PTPRN-208ENST00000446182 WDR17Q8IZU2 1322 aa15.07■□□□□ 0
PTPRN-208ENST00000446182 SIN3AQ96ST3 1273 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms