RNA–Protein interactions for RNA: ENST00000445346.1

LINC02549-201, Transcript of long intergenic non-protein coding RNA 2549, humanhuman

TSL 1 (best) BASIC

Gene LINC02549, Length 674 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02549-201ENST00000445346 ADAMTS13Q76LX8 1427 aa12.16□□□□□ -0.46
LINC02549-201ENST00000445346 MYO5BQ9ULV0 1848 aa12.16□□□□□ -0.46
LINC02549-201ENST00000445346 ZNF326Q5BKZ1 582 aaKnown RBP12.15□□□□□ -0.46
LINC02549-201ENST00000445346 ITGAEP38570 1179 aa12.14□□□□□ -0.47
LINC02549-201ENST00000445346 LCE2DQ5TA82 110 aaPredicted RBP12.14□□□□□ -0.47
LINC02549-201ENST00000445346 NUP155O75694 1391 aa12.14□□□□□ -0.47
LINC02549-201ENST00000445346 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.14□□□□□ -0.47
LINC02549-201ENST00000445346 DIP2AQ14689 1571 aa12.13□□□□□ -0.47
LINC02549-201ENST00000445346 AHDC1Q5TGY3 1603 aaPredicted RBP12.13□□□□□ -0.47
LINC02549-201ENST00000445346 AFF2P51816 1311 aa12.12□□□□□ -0.47
LINC02549-201ENST00000445346 TRPM2O94759 1503 aa12.12□□□□□ -0.47
LINC02549-201ENST00000445346 LRRC59Q96AG4 307 aaKnown RBP12.12□□□□□ -0.47
LINC02549-201ENST00000445346 ROCK1Q13464 1354 aa12.11□□□□□ -0.47
LINC02549-201ENST00000445346 L3MBTL3Q96JM7 780 aaPredicted RBP12.11□□□□□ -0.47
LINC02549-201ENST00000445346 C8orf37Q96NL8 207 aa12.11□□□□□ -0.47
LINC02549-201ENST00000445346 PTPRUQ92729 1446 aa12.11□□□□□ -0.47
LINC02549-201ENST00000445346 E9PCH4 1651 aa12.1□□□□□ -0.47
LINC02549-201ENST00000445346 UNC13BO14795 1591 aa12.1□□□□□ -0.47
LINC02549-201ENST00000445346 SCUBE2Q9NQ36 999 aa12.1□□□□□ -0.47
LINC02549-201ENST00000445346 DCCP43146 1447 aa12.1□□□□□ -0.47
LINC02549-201ENST00000445346 SHPRHQ149N8 1683 aa12.1□□□□□ -0.47
LINC02549-201ENST00000445346 SLAIN1Q8ND83 568 aa12.09□□□□□ -0.47
LINC02549-201ENST00000445346 QTRT2Q9H974 415 aaKnown RBP12.09□□□□□ -0.47
LINC02549-201ENST00000445346 ASXL1Q8IXJ9 1541 aa12.08□□□□□ -0.48
LINC02549-201ENST00000445346 MAMSTRQ6ZN01 415 aa12.08□□□□□ -0.48
LINC02549-201ENST00000445346 DDX17Q92841 729 aaKnown RBP12.08□□□□□ -0.48
LINC02549-201ENST00000445346 RBM6P78332 1123 aaKnown RBP12.07□□□□□ -0.48
LINC02549-201ENST00000445346 MST1RQ04912 1400 aa12.07□□□□□ -0.48
LINC02549-201ENST00000445346 NGLY1Q96IV0 654 aa12.07□□□□□ -0.48
LINC02549-201ENST00000445346 SETD5Q9C0A6 1442 aa12.07□□□□□ -0.48
LINC02549-201ENST00000445346 IQGAP3Q86VI3 1631 aa12.07□□□□□ -0.48
LINC02549-201ENST00000445346 CDK12Q9NYV4 1490 aaPredicted RBP12.07□□□□□ -0.48
LINC02549-201ENST00000445346 METP08581 1390 aa12.06□□□□□ -0.48
LINC02549-201ENST00000445346 ADAMTS2O95450 1211 aa12.06□□□□□ -0.48
LINC02549-201ENST00000445346 BBXQ8WY36 941 aaPredicted RBP12.06□□□□□ -0.48
LINC02549-201ENST00000445346 C3orf67Q6ZVT6 689 aa12.04□□□□□ -0.48
LINC02549-201ENST00000445346 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.04□□□□□ -0.48
LINC02549-201ENST00000445346 PNPLA6Q8IY17 1366 aa12.04□□□□□ -0.48
LINC02549-201ENST00000445346 KIF3CO14782 793 aa12.03□□□□□ -0.48
LINC02549-201ENST00000445346 PPARGC1BQ86YN6 1023 aaKnown RBP12.03□□□□□ -0.48
LINC02549-201ENST00000445346 SETBP1Q9Y6X0 1596 aa12.03□□□□□ -0.48
LINC02549-201ENST00000445346 ADGRL3Q9HAR2 1447 aa12.03□□□□□ -0.48
LINC02549-201ENST00000445346 USP21Q9UK80 565 aa12.02□□□□□ -0.49
LINC02549-201ENST00000445346 XRN1Q8IZH2 1706 aaKnown RBP12.01□□□□□ -0.49
LINC02549-201ENST00000445346 RGS12O14924 1447 aa12.01□□□□□ -0.49
LINC02549-201ENST00000445346 NRXN3Q9Y4C0 1643 aa12□□□□□ -0.49
LINC02549-201ENST00000445346 ORAI2Q96SN7 254 aa12□□□□□ -0.49
LINC02549-201ENST00000445346 TRPC5Q9UL62 973 aaPredicted RBP12□□□□□ -0.49
LINC02549-201ENST00000445346 C1orf167Q5SNV9 1468 aa12□□□□□ -0.49
LINC02549-201ENST00000445346 NHSL1Q5SYE7 1610 aa12□□□□□ -0.49
LINC02549-201ENST00000445346 ATAD2Q6PL18 1390 aa11.99□□□□□ -0.49
LINC02549-201ENST00000445346 SPHKAPQ2M3C7 1700 aa11.98□□□□□ -0.49
LINC02549-201ENST00000445346 HOXB3P14651 431 aaPredicted RBP11.98□□□□□ -0.49
LINC02549-201ENST00000445346 SOS2Q07890 1332 aaPredicted RBP11.97□□□□□ -0.49
LINC02549-201ENST00000445346 C2orf72A6NCS6 295 aa11.97□□□□□ -0.49
LINC02549-201ENST00000445346 ESCO1Q5FWF5 840 aa11.97□□□□□ -0.49
LINC02549-201ENST00000445346 ROBO2Q9HCK4 1378 aa11.96□□□□□ -0.49
LINC02549-201ENST00000445346 NEXMIFQ5QGS0 1516 aa11.96□□□□□ -0.5
LINC02549-201ENST00000445346 RPGRIP1LQ68CZ1 1315 aa11.95□□□□□ -0.5
LINC02549-201ENST00000445346 FNBP4Q8N3X1 1017 aaPredicted RBP11.95□□□□□ -0.5
LINC02549-201ENST00000445346 PTCH1Q13635 1447 aa11.94□□□□□ -0.5
LINC02549-201ENST00000445346 NALCNQ8IZF0 1738 aa11.94□□□□□ -0.5
LINC02549-201ENST00000445346 CLTCL1P53675 1640 aa11.94□□□□□ -0.5
LINC02549-201ENST00000445346 NPHP3Q7Z494 1330 aa11.94□□□□□ -0.5
LINC02549-201ENST00000445346 FOXO3O43524 673 aa11.93□□□□□ -0.5
LINC02549-201ENST00000445346 PAXIP1Q6ZW49 1069 aaPredicted RBP11.93□□□□□ -0.5
LINC02549-201ENST00000445346 HFM1A2PYH4 1435 aa11.93□□□□□ -0.5
LINC02549-201ENST00000445346 G3V3G9 751 aa11.92□□□□□ -0.5
LINC02549-201ENST00000445346 XPCQ01831 940 aaPredicted RBP11.92□□□□□ -0.5
LINC02549-201ENST00000445346 CCDC125Q86Z20 511 aa11.92□□□□□ -0.5
LINC02549-201ENST00000445346 KIF1BO60333 1816 aa11.92□□□□□ -0.5
LINC02549-201ENST00000445346 LRPPRCP42704 1394 aaKnown RBP11.92□□□□□ -0.5
LINC02549-201ENST00000445346 NUTM2FA1L443 756 aa11.91□□□□□ -0.5
LINC02549-201ENST00000445346 STK26Q9P289 416 aa11.91□□□□□ -0.5
LINC02549-201ENST00000445346 ATRNO75882 1429 aa11.91□□□□□ -0.5
LINC02549-201ENST00000445346 ST18O60284 1047 aa11.9□□□□□ -0.5
LINC02549-201ENST00000445346 GJD4Q96KN9 370 aaPredicted RBP11.9□□□□□ -0.5
LINC02549-201ENST00000445346 CFAP44Q96MT7 982 aa11.9□□□□□ -0.5
LINC02549-201ENST00000445346 CRISPLD2Q9H0B8 497 aa11.9□□□□□ -0.5
LINC02549-201ENST00000445346 NAIPQ13075 1403 aa11.88□□□□□ -0.51
LINC02549-201ENST00000445346 HAP1P54257 671 aaPredicted RBP11.88□□□□□ -0.51
LINC02549-201ENST00000445346 RGL3Q3MIN7 710 aa11.88□□□□□ -0.51
LINC02549-201ENST00000445346 WAPLQ7Z5K2 1190 aa11.88□□□□□ -0.51
LINC02549-201ENST00000445346 FAM163AQ96GL9 167 aaPredicted RBP11.88□□□□□ -0.51
LINC02549-201ENST00000445346 LAMC1P11047 1609 aa11.88□□□□□ -0.51
LINC02549-201ENST00000445346 SF3B2Q13435 895 aaKnown RBP11.87□□□□□ -0.51
LINC02549-201ENST00000445346 UNC5CLQ8IV45 518 aa11.87□□□□□ -0.51
LINC02549-201ENST00000445346 SPRYD3Q8NCJ5 442 aa11.87□□□□□ -0.51
LINC02549-201ENST00000445346 BCL9LQ86UU0 1499 aa11.87□□□□□ -0.51
LINC02549-201ENST00000445346 DSG2Q14126 1118 aa11.86□□□□□ -0.51
LINC02549-201ENST00000445346 MYOM2P54296 1465 aa11.86□□□□□ -0.51
LINC02549-201ENST00000445346 COL22A1Q8NFW1 1626 aaPredicted RBP11.86□□□□□ -0.51
LINC02549-201ENST00000445346 PRAG1Q86YV5 1406 aa11.86□□□□□ -0.51
LINC02549-201ENST00000445346 ADGRF5Q8IZF2 1346 aa11.86□□□□□ -0.51
LINC02549-201ENST00000445346 TMEM132EQ6IEE7 984 aa11.85□□□□□ -0.51
LINC02549-201ENST00000445346 CCDC9Q9Y3X0 531 aaKnown RBP11.85□□□□□ -0.51
LINC02549-201ENST00000445346 SRCAPQ6ZRS2 3230 aa11.85□□□□□ -0.51
LINC02549-201ENST00000445346 PXDNQ92626 1479 aa11.84□□□□□ -0.51
LINC02549-201ENST00000445346 KRT28Q7Z3Y7 464 aa11.84□□□□□ -0.51
LINC02549-201ENST00000445346 RRBP1Q9P2E9 1410 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms