RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 MYT1Q01538 1121 aa22.41■■□□□ 1.18
SEC13-213ENST00000445064 KRT27Q7Z3Y8 459 aa22.41■■□□□ 1.18
SEC13-213ENST00000445064 ATP7BP35670 1465 aa22.41■■□□□ 1.18
SEC13-213ENST00000445064 BLMP54132 1417 aaPredicted RBP22.4■■□□□ 1.18
SEC13-213ENST00000445064 FAM98CQ17RN3 349 aaKnown RBP22.4■■□□□ 1.18
SEC13-213ENST00000445064 DEFB132Q7Z7B7 95 aa22.39■■□□□ 1.17
SEC13-213ENST00000445064 EP400Q96L91 3159 aa22.39■■□□□ 1.17
SEC13-213ENST00000445064 NUTM2GQ5VZR2 741 aa22.38■■□□□ 1.17
SEC13-213ENST00000445064 SF3B2Q13435 895 aaKnown RBP22.37■■□□□ 1.17
SEC13-213ENST00000445064 NBPF8Q3BBV2 869 aa22.37■■□□□ 1.17
SEC13-213ENST00000445064 PRDM11Q9NQV5 511 aa22.37■■□□□ 1.17
SEC13-213ENST00000445064 CCDC61Q9Y6R9 512 aa22.37■■□□□ 1.17
SEC13-213ENST00000445064 COL14A1Q05707 1796 aaKnown RBP22.37■■□□□ 1.17
SEC13-213ENST00000445064 NRAPQ86VF7 1730 aa22.37■■□□□ 1.17
SEC13-213ENST00000445064 ACEP12821 1306 aa22.36■■□□□ 1.17
SEC13-213ENST00000445064 ITSN1Q15811 1721 aa22.36■■□□□ 1.17
SEC13-213ENST00000445064 KIAA1210Q9ULL0 1709 aa22.35■■□□□ 1.17
SEC13-213ENST00000445064 CHRNA2Q15822 529 aa22.34■■□□□ 1.17
SEC13-213ENST00000445064 CRYBG1Q9Y4K1 1723 aa22.34■■□□□ 1.17
SEC13-213ENST00000445064 SPATA31A5Q5VU36 1347 aa22.33■■□□□ 1.17
SEC13-213ENST00000445064 SPATA31A7Q8IWB4 1347 aa22.33■■□□□ 1.17
SEC13-213ENST00000445064 PLEKHG3A1L390 1219 aa22.33■■□□□ 1.17
SEC13-213ENST00000445064 ZC3H6P61129 1189 aaKnown RBP22.33■■□□□ 1.17
SEC13-213ENST00000445064 POLR3AO14802 1390 aaPredicted RBP22.32■■□□□ 1.16
SEC13-213ENST00000445064 KIAA0232Q92628 1395 aa22.32■■□□□ 1.16
SEC13-213ENST00000445064 SRPK2P78362 688 aaKnown RBP22.31■■□□□ 1.16
SEC13-213ENST00000445064 FAM182BQ5T319 152 aa22.31■■□□□ 1.16
SEC13-213ENST00000445064 ABTB2Q8N961 1025 aa22.3■■□□□ 1.16
SEC13-213ENST00000445064 L3MBTL2Q969R5 705 aa22.3■■□□□ 1.16
SEC13-213ENST00000445064 STRN4Q9NRL3 753 aa22.3■■□□□ 1.16
SEC13-213ENST00000445064 CENPJQ9HC77 1338 aaPredicted RBP22.3■■□□□ 1.16
SEC13-213ENST00000445064 CABP2Q9NPB3 220 aa22.29■■□□□ 1.16
SEC13-213ENST00000445064 TOPAZ1Q8N9V7 1692 aa22.28■■□□□ 1.16
SEC13-213ENST00000445064 SIN3AQ96ST3 1273 aa22.28■■□□□ 1.16
SEC13-213ENST00000445064 PHRF1Q9P1Y6 1649 aaKnown RBP22.26■■□□□ 1.15
SEC13-213ENST00000445064 SPATA31A1Q5TZJ5 1347 aa22.26■■□□□ 1.15
SEC13-213ENST00000445064 EVA1CP58658 441 aa22.25■■□□□ 1.15
SEC13-213ENST00000445064 PPIP5K1Q6PFW1 1433 aa22.24■■□□□ 1.15
SEC13-213ENST00000445064 BAG6P46379 1132 aa22.24■■□□□ 1.15
SEC13-213ENST00000445064 NEUROD1Q13562 356 aa22.24■■□□□ 1.15
SEC13-213ENST00000445064 USP35Q9P2H5 1018 aa22.24■■□□□ 1.15
SEC13-213ENST00000445064 NLRP13Q86W25 1043 aa22.23■■□□□ 1.15
SEC13-213ENST00000445064 CABP1Q9NZU7 370 aa22.23■■□□□ 1.15
SEC13-213ENST00000445064 EN1Q05925 392 aaPredicted RBP22.21■■□□□ 1.15
SEC13-213ENST00000445064 THSD7AQ9UPZ6 1657 aa22.2■■□□□ 1.15
SEC13-213ENST00000445064 GCP02774 474 aa22.2■■□□□ 1.14
SEC13-213ENST00000445064 LARP1Q6PKG0 1096 aaKnown RBP22.19■■□□□ 1.14
SEC13-213ENST00000445064 USP19O94966 1318 aa22.19■■□□□ 1.14
SEC13-213ENST00000445064 QRICH2Q9H0J4 1663 aa22.19■■□□□ 1.14
SEC13-213ENST00000445064 CAMTA1Q9Y6Y1 1673 aa22.18■■□□□ 1.14
SEC13-213ENST00000445064 NRKQ7Z2Y5 1582 aa22.17■■□□□ 1.14
SEC13-213ENST00000445064 CPDO75976 1380 aa22.17■■□□□ 1.14
SEC13-213ENST00000445064 PSDA5PKW4 1024 aaPredicted RBP22.17■■□□□ 1.14
SEC13-213ENST00000445064 SSH2Q76I76 1423 aa22.16■■□□□ 1.14
SEC13-213ENST00000445064 NLRP6P59044 892 aa22.16■■□□□ 1.14
SEC13-213ENST00000445064 EVC2Q86UK5 1308 aa22.15■■□□□ 1.14
SEC13-213ENST00000445064 ZBTB7CA1YPR0 619 aa22.15■■□□□ 1.14
SEC13-213ENST00000445064 TRIM37O94972 964 aa22.15■■□□□ 1.14
SEC13-213ENST00000445064 FAM196AQ6ZSG2 479 aa22.15■■□□□ 1.14
SEC13-213ENST00000445064 BARGINQ6ZT62 677 aa22.15■■□□□ 1.14
SEC13-213ENST00000445064 RGPD1P0DJD0 1748 aa22.14■■□□□ 1.13
SEC13-213ENST00000445064 USP6P35125 1406 aa22.14■■□□□ 1.13
SEC13-213ENST00000445064 SRCAPQ6ZRS2 3230 aa22.14■■□□□ 1.13
SEC13-213ENST00000445064 BRD4O60885 1362 aaPredicted RBP22.13■■□□□ 1.13
SEC13-213ENST00000445064 TRPM1Q7Z4N2 1603 aa22.13■■□□□ 1.13
SEC13-213ENST00000445064 PDE3BQ13370 1112 aa22.13■■□□□ 1.13
SEC13-213ENST00000445064 TCP11L2Q8N4U5 519 aa22.13■■□□□ 1.13
SEC13-213ENST00000445064 ROCK2O75116 1388 aaKnown RBP22.12■■□□□ 1.13
SEC13-213ENST00000445064 EZH2Q15910 746 aaKnown RBP22.12■■□□□ 1.13
SEC13-213ENST00000445064 LMO7Q8WWI1 1683 aa22.11■■□□□ 1.13
SEC13-213ENST00000445064 APBA3O96018 575 aa22.09■■□□□ 1.13
SEC13-213ENST00000445064 THRAP3Q9Y2W1 955 aaKnown RBP22.09■■□□□ 1.13
SEC13-213ENST00000445064 CAMKK2Q96RR4 588 aa22.08■■□□□ 1.13
SEC13-213ENST00000445064 ZNF692Q9BU19 519 aaPredicted RBP22.08■■□□□ 1.13
SEC13-213ENST00000445064 TNS1Q9HBL0 1735 aaKnown RBP22.08■■□□□ 1.12
SEC13-213ENST00000445064 R3HDM1Q15032 1099 aaKnown RBP22.07■■□□□ 1.12
SEC13-213ENST00000445064 COL5A2P05997 1499 aaPredicted RBP22.07■■□□□ 1.12
SEC13-213ENST00000445064 DISP2A7MBM2 1401 aa22.06■■□□□ 1.12
SEC13-213ENST00000445064 TTC21BQ7Z4L5 1316 aa22.06■■□□□ 1.12
SEC13-213ENST00000445064 AATKQ6ZMQ8 1374 aa22.05■■□□□ 1.12
SEC13-213ENST00000445064 AXIN2Q9Y2T1 843 aa22.04■■□□□ 1.12
SEC13-213ENST00000445064 SLIT3O75094 1523 aa22.04■■□□□ 1.12
SEC13-213ENST00000445064 CRB1P82279 1406 aa22.04■■□□□ 1.12
SEC13-213ENST00000445064 SOX12O15370 315 aa22.03■■□□□ 1.12
SEC13-213ENST00000445064 PIK3C2AO00443 1686 aa22.03■■□□□ 1.12
SEC13-213ENST00000445064 TOM1L2Q6ZVM7 507 aa22.02■■□□□ 1.12
SEC13-213ENST00000445064 LRP5O75197 1615 aa22■■□□□ 1.11
SEC13-213ENST00000445064 ARHGEF25Q86VW2 580 aa22■■□□□ 1.11
SEC13-213ENST00000445064 KCNH5Q8NCM2 988 aa22■■□□□ 1.11
SEC13-213ENST00000445064 CARD11Q9BXL7 1154 aa22■■□□□ 1.11
SEC13-213ENST00000445064 TTC21AQ8NDW8 1320 aa21.99■■□□□ 1.11
SEC13-213ENST00000445064 COL18A1P39060 1754 aa21.99■■□□□ 1.11
SEC13-213ENST00000445064 KTN1Q86UP2 1357 aaKnown RBP21.99■■□□□ 1.11
SEC13-213ENST00000445064 CPSF1Q10570 1443 aaKnown RBP21.98■■□□□ 1.11
SEC13-213ENST00000445064 AKAP12Q02952 1782 aa21.98■■□□□ 1.11
SEC13-213ENST00000445064 PARP4Q9UKK3 1724 aaKnown RBP21.97■■□□□ 1.11
SEC13-213ENST00000445064 DDB1Q16531 1140 aa21.97■■□□□ 1.11
SEC13-213ENST00000445064 WDR17Q8IZU2 1322 aa21.97■■□□□ 1.11
SEC13-213ENST00000445064 PARD3Q8TEW0 1356 aa21.97■■□□□ 1.11
SEC13-213ENST00000445064 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms