RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 UBAP1LF5GYI3 381 aa20.7■□□□□ 0.9
CCNE1-203ENST00000444983 FYB1O15117 783 aa20.7■□□□□ 0.9
CCNE1-203ENST00000444983 DDX17Q92841 729 aaKnown RBP20.7■□□□□ 0.9
CCNE1-203ENST00000444983 SOS2Q07890 1332 aaPredicted RBP20.69■□□□□ 0.9
CCNE1-203ENST00000444983 KIF20BQ96Q89 1820 aa20.69■□□□□ 0.9
CCNE1-203ENST00000444983 KRT28Q7Z3Y7 464 aa20.69■□□□□ 0.9
CCNE1-203ENST00000444983 TTC21AQ8NDW8 1320 aa20.68■□□□□ 0.9
CCNE1-203ENST00000444983 AHDC1Q5TGY3 1603 aaPredicted RBP20.68■□□□□ 0.9
CCNE1-203ENST00000444983 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.67■□□□□ 0.9
CCNE1-203ENST00000444983 NSD2O96028 1365 aa20.67■□□□□ 0.9
CCNE1-203ENST00000444983 PIK3C2AO00443 1686 aa20.67■□□□□ 0.9
CCNE1-203ENST00000444983 ANKRD26Q9UPS8 1709 aa20.67■□□□□ 0.9
CCNE1-203ENST00000444983 USP54Q70EL1 1684 aa20.66■□□□□ 0.9
CCNE1-203ENST00000444983 ALS2Q96Q42 1657 aa20.66■□□□□ 0.9
CCNE1-203ENST00000444983 SBNO1A3KN83 1393 aa20.66■□□□□ 0.9
CCNE1-203ENST00000444983 XPCQ01831 940 aaPredicted RBP20.66■□□□□ 0.9
CCNE1-203ENST00000444983 NME9Q86XW9 330 aa20.65■□□□□ 0.9
CCNE1-203ENST00000444983 USP31Q70CQ4 1352 aa20.65■□□□□ 0.9
CCNE1-203ENST00000444983 PARD3Q8TEW0 1356 aa20.65■□□□□ 0.9
CCNE1-203ENST00000444983 PRKRIP1Q9H875 184 aaPredicted RBP20.64■□□□□ 0.9
CCNE1-203ENST00000444983 MARF1Q9Y4F3 1742 aaKnown RBP20.64■□□□□ 0.9
CCNE1-203ENST00000444983 CC2D1BQ5T0F9 858 aaKnown RBP20.64■□□□□ 0.89
CCNE1-203ENST00000444983 GGNBP2Q9H3C7 697 aa20.63■□□□□ 0.89
CCNE1-203ENST00000444983 OVOS2A0A0J9YW53 1432 aa20.62■□□□□ 0.89
CCNE1-203ENST00000444983 OVOS2Q6IE36 1432 aa20.62■□□□□ 0.89
CCNE1-203ENST00000444983 PIP4K2BP78356 416 aa20.61■□□□□ 0.89
CCNE1-203ENST00000444983 ZRANB1Q9UGI0 708 aa20.61■□□□□ 0.89
CCNE1-203ENST00000444983 SPATA31A3Q5VYP0 1347 aa20.61■□□□□ 0.89
CCNE1-203ENST00000444983 TNS3Q68CZ2 1445 aa20.61■□□□□ 0.89
CCNE1-203ENST00000444983 PAK3O75914 559 aaPredicted RBP20.61■□□□□ 0.89
CCNE1-203ENST00000444983 ABTB2Q8N961 1025 aa20.61■□□□□ 0.89
CCNE1-203ENST00000444983 ANP32CO43423 234 aa20.6■□□□□ 0.89
CCNE1-203ENST00000444983 RALBP1Q15311 655 aa20.6■□□□□ 0.89
CCNE1-203ENST00000444983 COL16A1Q07092 1604 aaPredicted RBP20.59■□□□□ 0.89
CCNE1-203ENST00000444983 PHLPP1O60346 1717 aa20.58■□□□□ 0.89
CCNE1-203ENST00000444983 SCAF1Q9H7N4 1312 aaKnown RBP20.57■□□□□ 0.88
CCNE1-203ENST00000444983 COG3Q96JB2 828 aa20.57■□□□□ 0.88
CCNE1-203ENST00000444983 NLRP6P59044 892 aa20.56■□□□□ 0.88
CCNE1-203ENST00000444983 MORC1Q86VD1 984 aa20.56■□□□□ 0.88
CCNE1-203ENST00000444983 ARHGEF10O15013 1369 aa20.55■□□□□ 0.88
CCNE1-203ENST00000444983 CRYBG1Q9Y4K1 1723 aa20.55■□□□□ 0.88
CCNE1-203ENST00000444983 CNGB1Q14028 1251 aaPredicted RBP20.55■□□□□ 0.88
CCNE1-203ENST00000444983 USP19O94966 1318 aa20.55■□□□□ 0.88
CCNE1-203ENST00000444983 NLRP13Q86W25 1043 aa20.54■□□□□ 0.88
CCNE1-203ENST00000444983 MIER1Q8N108 512 aa20.54■□□□□ 0.88
CCNE1-203ENST00000444983 LRRC59Q96AG4 307 aaKnown RBP20.54■□□□□ 0.88
CCNE1-203ENST00000444983 MED1Q15648 1581 aaPredicted RBP20.54■□□□□ 0.88
CCNE1-203ENST00000444983 SLIT3O75094 1523 aa20.54■□□□□ 0.88
CCNE1-203ENST00000444983 NUTM2GQ5VZR2 741 aa20.54■□□□□ 0.88
CCNE1-203ENST00000444983 AATKQ6ZMQ8 1374 aa20.53■□□□□ 0.88
CCNE1-203ENST00000444983 COL22A1Q8NFW1 1626 aaPredicted RBP20.52■□□□□ 0.87
CCNE1-203ENST00000444983 PPP2R1AP30153 589 aa20.51■□□□□ 0.87
CCNE1-203ENST00000444983 MYBBP1AQ9BQG0 1328 aaKnown RBP20.51■□□□□ 0.87
CCNE1-203ENST00000444983 NFAT5O94916 1531 aa20.51■□□□□ 0.87
CCNE1-203ENST00000444983 MAP2P11137 1827 aaKnown RBP20.5■□□□□ 0.87
CCNE1-203ENST00000444983 LMOD2Q6P5Q4 547 aa20.5■□□□□ 0.87
CCNE1-203ENST00000444983 PHRF1Q9P1Y6 1649 aaKnown RBP20.49■□□□□ 0.87
CCNE1-203ENST00000444983 FBLN1P23142 703 aa20.49■□□□□ 0.87
CCNE1-203ENST00000444983 TNNT2P45379 298 aaPredicted RBP20.48■□□□□ 0.87
CCNE1-203ENST00000444983 PNPLA6Q8IY17 1366 aa20.48■□□□□ 0.87
CCNE1-203ENST00000444983 ABCA3Q99758 1704 aa20.48■□□□□ 0.87
CCNE1-203ENST00000444983 SMG6Q86US8 1419 aaKnown RBP20.47■□□□□ 0.87
CCNE1-203ENST00000444983 GCP02774 474 aa20.47■□□□□ 0.87
CCNE1-203ENST00000444983 KCNH5Q8NCM2 988 aa20.47■□□□□ 0.87
CCNE1-203ENST00000444983 POLKQ9UBT6 870 aa20.47■□□□□ 0.87
CCNE1-203ENST00000444983 SHPRHQ149N8 1683 aa20.45■□□□□ 0.86
CCNE1-203ENST00000444983 HSPA1LP34931 641 aa20.45■□□□□ 0.86
CCNE1-203ENST00000444983 CABLES1Q8TDN4 633 aa20.45■□□□□ 0.86
CCNE1-203ENST00000444983 CCER2I3L3R5 266 aa20.44■□□□□ 0.86
CCNE1-203ENST00000444983 MTHFSP49914 203 aa20.43■□□□□ 0.86
CCNE1-203ENST00000444983 CCDC184Q52MB2 194 aa20.43■□□□□ 0.86
CCNE1-203ENST00000444983 LTN1O94822 1766 aa20.43■□□□□ 0.86
CCNE1-203ENST00000444983 PEAK1Q9H792 1746 aa20.42■□□□□ 0.86
CCNE1-203ENST00000444983 RRS1Q15050 365 aaKnown RBP20.42■□□□□ 0.86
CCNE1-203ENST00000444983 ARHGEF25Q86VW2 580 aa20.42■□□□□ 0.86
CCNE1-203ENST00000444983 EMILIN1Q9Y6C2 1016 aa20.42■□□□□ 0.86
CCNE1-203ENST00000444983 MAP3K19Q56UN5 1328 aa20.41■□□□□ 0.86
CCNE1-203ENST00000444983 INSRP06213 1382 aa20.41■□□□□ 0.86
CCNE1-203ENST00000444983 CPDO75976 1380 aa20.41■□□□□ 0.86
CCNE1-203ENST00000444983 KIF24Q5T7B8 1368 aa20.41■□□□□ 0.86
CCNE1-203ENST00000444983 JCADQ9P266 1359 aa20.41■□□□□ 0.86
CCNE1-203ENST00000444983 SOX12O15370 315 aa20.4■□□□□ 0.86
CCNE1-203ENST00000444983 CDK12Q9NYV4 1490 aaPredicted RBP20.4■□□□□ 0.86
CCNE1-203ENST00000444983 FBXO41Q8TF61 875 aa20.38■□□□□ 0.85
CCNE1-203ENST00000444983 COL3A1P02461 1466 aaPredicted RBP20.38■□□□□ 0.85
CCNE1-203ENST00000444983 COL18A1P39060 1754 aa20.38■□□□□ 0.85
CCNE1-203ENST00000444983 PLEKHG5O94827 1062 aa20.37■□□□□ 0.85
CCNE1-203ENST00000444983 RTL1A6NKG5 1358 aa20.36■□□□□ 0.85
CCNE1-203ENST00000444983 ABCC6O95255 1503 aa20.36■□□□□ 0.85
CCNE1-203ENST00000444983 FLT4P35916 1363 aa20.36■□□□□ 0.85
CCNE1-203ENST00000444983 ZC3H6P61129 1189 aaKnown RBP20.35■□□□□ 0.85
CCNE1-203ENST00000444983 KIAA0232Q92628 1395 aa20.35■□□□□ 0.85
CCNE1-203ENST00000444983 HOXC9P31274 260 aa20.34■□□□□ 0.85
CCNE1-203ENST00000444983 HSP90AB2PQ58FF8 381 aa20.34■□□□□ 0.85
CCNE1-203ENST00000444983 IP6K1Q92551 441 aa20.34■□□□□ 0.85
CCNE1-203ENST00000444983 MRS2Q9HD23 443 aa20.34■□□□□ 0.85
CCNE1-203ENST00000444983 PPM1GO15355 546 aaPredicted RBP20.33■□□□□ 0.85
CCNE1-203ENST00000444983 SPATA31A6Q5VVP1 1343 aa20.33■□□□□ 0.84
CCNE1-203ENST00000444983 LMO7Q8WWI1 1683 aa20.33■□□□□ 0.84
CCNE1-203ENST00000444983 AMPHP49418 695 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms