RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 DLC1Q96QB1 1528 aa15.94■□□□□ 0.14
HDAC8-215ENST00000444609 MAP3K5Q99683 1374 aa15.92■□□□□ 0.14
HDAC8-215ENST00000444609 KIF1AQ12756 1690 aa15.92■□□□□ 0.14
HDAC8-215ENST00000444609 COL14A1Q05707 1796 aaKnown RBP15.91■□□□□ 0.14
HDAC8-215ENST00000444609 BARGINQ6ZT62 677 aa15.91■□□□□ 0.14
HDAC8-215ENST00000444609 ARXQ96QS3 562 aa15.91■□□□□ 0.14
HDAC8-215ENST00000444609 MTFR1LQ9H019 292 aa15.91■□□□□ 0.14
HDAC8-215ENST00000444609 ABCA3Q99758 1704 aa15.91■□□□□ 0.14
HDAC8-215ENST00000444609 SHANK3Q9BYB0 1731 aa15.91■□□□□ 0.14
HDAC8-215ENST00000444609 PRELPP51888 382 aa15.9■□□□□ 0.14
HDAC8-215ENST00000444609 BCL11BQ9C0K0 894 aaPredicted RBP15.9■□□□□ 0.14
HDAC8-215ENST00000444609 NUP155O75694 1391 aa15.89■□□□□ 0.13
HDAC8-215ENST00000444609 C11orf95C9JLR9 678 aaPredicted RBP15.88■□□□□ 0.13
HDAC8-215ENST00000444609 COL13A1Q5TAT6 717 aaPredicted RBP15.88■□□□□ 0.13
HDAC8-215ENST00000444609 PROM2Q8N271 834 aa15.88■□□□□ 0.13
HDAC8-215ENST00000444609 PRDM11Q9NQV5 511 aa15.87■□□□□ 0.13
HDAC8-215ENST00000444609 USP35Q9P2H5 1018 aa15.87■□□□□ 0.13
HDAC8-215ENST00000444609 NRXN1Q9ULB1 1477 aa15.86■□□□□ 0.13
HDAC8-215ENST00000444609 STRN4Q9NRL3 753 aa15.86■□□□□ 0.13
HDAC8-215ENST00000444609 STK26Q9P289 416 aa15.86■□□□□ 0.13
HDAC8-215ENST00000444609 PLEKHH1Q9ULM0 1364 aa15.86■□□□□ 0.13
HDAC8-215ENST00000444609 VPS8Q8N3P4 1428 aa15.85■□□□□ 0.13
HDAC8-215ENST00000444609 STK32BQ9NY57 414 aa15.85■□□□□ 0.13
HDAC8-215ENST00000444609 TECPR2O15040 1411 aa15.85■□□□□ 0.13
HDAC8-215ENST00000444609 SLC15A2Q16348 729 aa15.84■□□□□ 0.13
HDAC8-215ENST00000444609 DNAJC5GQ8N7S2 189 aa15.84■□□□□ 0.13
HDAC8-215ENST00000444609 GPBP1L1Q9HC44 474 aaPredicted RBP15.83■□□□□ 0.12
HDAC8-215ENST00000444609 PCDH10Q9P2E7 1040 aa15.83■□□□□ 0.12
HDAC8-215ENST00000444609 FMN2Q9NZ56 1722 aa15.82■□□□□ 0.12
HDAC8-215ENST00000444609 PELP1Q8IZL8 1130 aaKnown RBP15.82■□□□□ 0.12
HDAC8-215ENST00000444609 RPGRIP1LQ68CZ1 1315 aa15.82■□□□□ 0.12
HDAC8-215ENST00000444609 ATP10DQ9P241 1426 aa15.82■□□□□ 0.12
HDAC8-215ENST00000444609 ABCC11Q96J66 1382 aa15.81■□□□□ 0.12
HDAC8-215ENST00000444609 CHRNA2Q15822 529 aa15.8■□□□□ 0.12
HDAC8-215ENST00000444609 PTF1AQ7RTS3 328 aa15.8■□□□□ 0.12
HDAC8-215ENST00000444609 TNS4Q8IZW8 715 aa15.8■□□□□ 0.12
HDAC8-215ENST00000444609 TCP11L2Q8N4U5 519 aa15.8■□□□□ 0.12
HDAC8-215ENST00000444609 PMFBP1Q8TBY8 1022 aa15.8■□□□□ 0.12
HDAC8-215ENST00000444609 GRIN3BO60391 1043 aa15.79■□□□□ 0.12
HDAC8-215ENST00000444609 APLP1P51693 650 aa15.79■□□□□ 0.12
HDAC8-215ENST00000444609 EVA1CP58658 441 aa15.79■□□□□ 0.12
HDAC8-215ENST00000444609 FAM50AQ14320 339 aaKnown RBP15.79■□□□□ 0.12
HDAC8-215ENST00000444609 KIAA0232Q92628 1395 aa15.78■□□□□ 0.12
HDAC8-215ENST00000444609 RGPD3A6NKT7 1758 aaPredicted RBP15.78■□□□□ 0.12
HDAC8-215ENST00000444609 RGPD4Q7Z3J3 1758 aa15.78■□□□□ 0.12
HDAC8-215ENST00000444609 CLTCL1P53675 1640 aa15.78■□□□□ 0.12
HDAC8-215ENST00000444609 GOLGB1Q14789 3259 aaKnown RBP15.78■□□□□ 0.12
HDAC8-215ENST00000444609 TXNRD1Q16881 649 aa15.77■□□□□ 0.12
HDAC8-215ENST00000444609 THRAP3Q9Y2W1 955 aaKnown RBP15.77■□□□□ 0.12
HDAC8-215ENST00000444609 LARP1Q6PKG0 1096 aaKnown RBP15.76■□□□□ 0.11
HDAC8-215ENST00000444609 SIRT1Q96EB6 747 aa15.76■□□□□ 0.11
HDAC8-215ENST00000444609 OVOS2A0A0G2JMS6 1433 aa15.76■□□□□ 0.11
HDAC8-215ENST00000444609 OVOS2A0A0J9YW53 1432 aa15.76■□□□□ 0.11
HDAC8-215ENST00000444609 OVOS2Q6IE36 1432 aa15.76■□□□□ 0.11
HDAC8-215ENST00000444609 SSH2Q76I76 1423 aa15.76■□□□□ 0.11
HDAC8-215ENST00000444609 YBX3P16989 372 aaKnown RBP eCLIP15.74■□□□□ 0.11
HDAC8-215ENST00000444609 TMEM132EQ6IEE7 984 aa15.74■□□□□ 0.11
HDAC8-215ENST00000444609 GPRASP1Q5JY77 1395 aa15.74■□□□□ 0.11
HDAC8-215ENST00000444609 KLHL34Q8N239 644 aa15.73■□□□□ 0.11
HDAC8-215ENST00000444609 ZC3H6P61129 1189 aaKnown RBP15.72■□□□□ 0.11
HDAC8-215ENST00000444609 NLGN2Q8NFZ4 835 aa15.72■□□□□ 0.11
HDAC8-215ENST00000444609 ZNF526Q8TF50 670 aaPredicted RBP15.72■□□□□ 0.11
HDAC8-215ENST00000444609 ROCK1Q13464 1354 aa15.72■□□□□ 0.11
HDAC8-215ENST00000444609 ACIN1Q9UKV3 1341 aaKnown RBP15.71■□□□□ 0.11
HDAC8-215ENST00000444609 DHX57Q6P158 1386 aaKnown RBP15.71■□□□□ 0.11
HDAC8-215ENST00000444609 ALS2Q96Q42 1657 aa15.7■□□□□ 0.1
HDAC8-215ENST00000444609 TRPM3Q9HCF6 1732 aaPredicted RBP15.7■□□□□ 0.1
HDAC8-215ENST00000444609 RGPD8O14715 1765 aaPredicted RBP15.7■□□□□ 0.1
HDAC8-215ENST00000444609 ADGRF5Q8IZF2 1346 aa15.69■□□□□ 0.1
HDAC8-215ENST00000444609 PEAK1Q9H792 1746 aa15.69■□□□□ 0.1
HDAC8-215ENST00000444609 KIF3CO14782 793 aa15.69■□□□□ 0.1
HDAC8-215ENST00000444609 PAK3O75914 559 aaPredicted RBP15.69■□□□□ 0.1
HDAC8-215ENST00000444609 JMYQ8N9B5 988 aa15.69■□□□□ 0.1
HDAC8-215ENST00000444609 ADCY9O60503 1353 aa15.69■□□□□ 0.1
HDAC8-215ENST00000444609 ANKARQ7Z5J8 1434 aa15.68■□□□□ 0.1
HDAC8-215ENST00000444609 POLD1P28340 1107 aa15.67■□□□□ 0.1
HDAC8-215ENST00000444609 KIF1BO60333 1816 aa15.66■□□□□ 0.1
HDAC8-215ENST00000444609 ATP7BP35670 1465 aa15.66■□□□□ 0.1
HDAC8-215ENST00000444609 APLP2Q06481 763 aa15.66■□□□□ 0.1
HDAC8-215ENST00000444609 DDB1Q16531 1140 aa15.66■□□□□ 0.1
HDAC8-215ENST00000444609 BCL9O00512 1426 aa15.66■□□□□ 0.1
HDAC8-215ENST00000444609 YTHDC2Q9H6S0 1430 aaKnown RBP15.66■□□□□ 0.1
HDAC8-215ENST00000444609 CRYBG1Q9Y4K1 1723 aa15.65■□□□□ 0.1
HDAC8-215ENST00000444609 AATKQ6ZMQ8 1374 aa15.65■□□□□ 0.1
HDAC8-215ENST00000444609 SLC16A10Q8TF71 515 aa15.65■□□□□ 0.1
HDAC8-215ENST00000444609 MARCH10Q8NA82 808 aaPredicted RBP15.64■□□□□ 0.09
HDAC8-215ENST00000444609 KLRG1Q96E93 195 aa15.64■□□□□ 0.09
HDAC8-215ENST00000444609 PARP4Q9UKK3 1724 aaKnown RBP15.63■□□□□ 0.09
HDAC8-215ENST00000444609 WWC3Q9ULE0 1092 aa15.63■□□□□ 0.09
HDAC8-215ENST00000444609 KNDC1Q76NI1 1749 aa15.63■□□□□ 0.09
HDAC8-215ENST00000444609 IFT172Q9UG01 1749 aa15.63■□□□□ 0.09
HDAC8-215ENST00000444609 SAFB2Q14151 953 aaKnown RBP eCLIP15.62■□□□□ 0.09
HDAC8-215ENST00000444609 NGDNQ8NEJ9 315 aaKnown RBP15.62■□□□□ 0.09
HDAC8-215ENST00000444609 SBF2Q86WG5 1849 aa15.61■□□□□ 0.09
HDAC8-215ENST00000444609 PPLO60437 1756 aa15.6■□□□□ 0.09
HDAC8-215ENST00000444609 TOMM70O94826 608 aa15.6■□□□□ 0.09
HDAC8-215ENST00000444609 ZNF827Q17R98 1081 aa15.6■□□□□ 0.09
HDAC8-215ENST00000444609 PRAM1Q96QH2 718 aa15.6■□□□□ 0.09
HDAC8-215ENST00000444609 PRR36Q9H6K5 1346 aa15.59■□□□□ 0.09
HDAC8-215ENST00000444609 CPDO75976 1380 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms