RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 TMPOP42166 694 aaKnown RBP13.19□□□□□ -0.3
TOP3B-210ENST00000444502 PDE4CQ08493 712 aa13.19□□□□□ -0.3
TOP3B-210ENST00000444502 RBM10P98175 930 aaKnown RBP13.18□□□□□ -0.3
TOP3B-210ENST00000444502 WDR63Q8IWG1 891 aa13.18□□□□□ -0.3
TOP3B-210ENST00000444502 LNPKQ9C0E8 428 aa13.18□□□□□ -0.3
TOP3B-210ENST00000444502 FRAT2O75474 233 aaPredicted RBP13.18□□□□□ -0.3
TOP3B-210ENST00000444502 FKBP5Q13451 457 aaPredicted RBP13.18□□□□□ -0.3
TOP3B-210ENST00000444502 TAF7LQ5H9L4 462 aa13.18□□□□□ -0.3
TOP3B-210ENST00000444502 ATAD2Q6PL18 1390 aa13.18□□□□□ -0.3
TOP3B-210ENST00000444502 FGD1P98174 961 aa13.18□□□□□ -0.3
TOP3B-210ENST00000444502 AIMP1Q12904 312 aaKnown RBP13.18□□□□□ -0.3
TOP3B-210ENST00000444502 HSCBQ8IWL3 235 aa13.18□□□□□ -0.3
TOP3B-210ENST00000444502 PDZRN3Q9UPQ7 1066 aa13.18□□□□□ -0.3
TOP3B-210ENST00000444502 MAST1Q9Y2H9 1570 aa13.17□□□□□ -0.3
TOP3B-210ENST00000444502 WASLO00401 505 aaPredicted RBP13.17□□□□□ -0.3
TOP3B-210ENST00000444502 RARSP54136 660 aaKnown RBP13.17□□□□□ -0.3
TOP3B-210ENST00000444502 DDX54Q8TDD1 881 aaKnown RBP13.17□□□□□ -0.3
TOP3B-210ENST00000444502 NOB1Q9ULX3 412 aaKnown RBP13.17□□□□□ -0.3
TOP3B-210ENST00000444502 ASXL1Q8IXJ9 1541 aa13.17□□□□□ -0.3
TOP3B-210ENST00000444502 DMRT2Q9Y5R5 561 aa13.17□□□□□ -0.3
TOP3B-210ENST00000444502 TOM1L2Q6ZVM7 507 aa13.17□□□□□ -0.3
TOP3B-210ENST00000444502 ATP7AQ04656 1500 aa13.16□□□□□ -0.3
TOP3B-210ENST00000444502 EMILIN1Q9Y6C2 1016 aa13.16□□□□□ -0.3
TOP3B-210ENST00000444502 BCORL1Q5H9F3 1711 aa13.16□□□□□ -0.3
TOP3B-210ENST00000444502 C1orf115Q9H7X2 142 aa13.16□□□□□ -0.3
TOP3B-210ENST00000444502 FOXD4L1Q9NU39 408 aa13.15□□□□□ -0.3
TOP3B-210ENST00000444502 PPP6R1Q9UPN7 881 aa13.15□□□□□ -0.3
TOP3B-210ENST00000444502 PHF8Q9UPP1 1060 aa13.15□□□□□ -0.3
TOP3B-210ENST00000444502 PREX2Q70Z35 1606 aa13.15□□□□□ -0.3
TOP3B-210ENST00000444502 USHBP1Q8N6Y0 703 aa13.15□□□□□ -0.3
TOP3B-210ENST00000444502 TNNQ9UQP3 1299 aa13.15□□□□□ -0.3
TOP3B-210ENST00000444502 MYO5CQ9NQX4 1742 aa13.15□□□□□ -0.3
TOP3B-210ENST00000444502 GORABQ5T7V8 394 aa13.14□□□□□ -0.31
TOP3B-210ENST00000444502 ATP10AO60312 1499 aa13.14□□□□□ -0.31
TOP3B-210ENST00000444502 GNAI1P63096 354 aa13.14□□□□□ -0.31
TOP3B-210ENST00000444502 ZMYM3Q14202 1370 aa13.14□□□□□ -0.31
TOP3B-210ENST00000444502 NKTRP30414 1462 aaKnown RBP13.14□□□□□ -0.31
TOP3B-210ENST00000444502 CHMP4AQ9BY43 222 aa13.14□□□□□ -0.31
TOP3B-210ENST00000444502 NCKAP5LQ9HCH0 1330 aa13.14□□□□□ -0.31
TOP3B-210ENST00000444502 EIF2AK4Q9P2K8 1649 aaKnown RBP13.14□□□□□ -0.31
TOP3B-210ENST00000444502 TRIM6-TRIM34B2RNG4 842 aa13.13□□□□□ -0.31
TOP3B-210ENST00000444502 FYB1O15117 783 aa13.13□□□□□ -0.31
TOP3B-210ENST00000444502 NCLP19338 710 aaKnown RBP13.13□□□□□ -0.31
TOP3B-210ENST00000444502 L1TD1Q5T7N2 865 aaKnown RBP13.13□□□□□ -0.31
TOP3B-210ENST00000444502 MAGI2Q86UL8 1455 aa13.13□□□□□ -0.31
TOP3B-210ENST00000444502 UGGT1Q9NYU2 1555 aa13.13□□□□□ -0.31
TOP3B-210ENST00000444502 UHRF1BP1LA0JNW5 1464 aa13.13□□□□□ -0.31
TOP3B-210ENST00000444502 RNF123Q5XPI4 1314 aa13.13□□□□□ -0.31
TOP3B-210ENST00000444502 RRP9O43818 475 aaKnown RBP13.13□□□□□ -0.31
TOP3B-210ENST00000444502 IGHDP01880 384 aa13.13□□□□□ -0.31
TOP3B-210ENST00000444502 SSH1Q8WYL5 1049 aa13.13□□□□□ -0.31
TOP3B-210ENST00000444502 ADCY10Q96PN6 1610 aa13.13□□□□□ -0.31
TOP3B-210ENST00000444502 ADAMTS2O95450 1211 aa13.13□□□□□ -0.31
TOP3B-210ENST00000444502 DCTN1Q14203 1278 aa13.13□□□□□ -0.31
TOP3B-210ENST00000444502 KIF16BQ96L93 1317 aa13.12□□□□□ -0.31
TOP3B-210ENST00000444502 C9orf78Q9NZ63 289 aaPredicted RBP13.12□□□□□ -0.31
TOP3B-210ENST00000444502 ZNF530Q6P9A1 599 aaPredicted RBP13.12□□□□□ -0.31
TOP3B-210ENST00000444502 HMMRO75330 724 aa13.12□□□□□ -0.31
TOP3B-210ENST00000444502 MVPQ14764 893 aaKnown RBP13.11□□□□□ -0.31
TOP3B-210ENST00000444502 ATF7IPQ6VMQ6 1270 aa13.11□□□□□ -0.31
TOP3B-210ENST00000444502 MIS18AQ9NYP9 233 aa13.11□□□□□ -0.31
TOP3B-210ENST00000444502 KDM5DQ9BY66 1539 aa13.1□□□□□ -0.31
TOP3B-210ENST00000444502 YEATS2Q9ULM3 1422 aa13.1□□□□□ -0.31
TOP3B-210ENST00000444502 ZRANB1Q9UGI0 708 aa13.1□□□□□ -0.31
TOP3B-210ENST00000444502 TWISTNBQ3B726 338 aaPredicted RBP13.1□□□□□ -0.31
TOP3B-210ENST00000444502 FAM177BA6PVY3 158 aa13.1□□□□□ -0.31
TOP3B-210ENST00000444502 FCHSD2O94868 740 aa13.1□□□□□ -0.31
TOP3B-210ENST00000444502 TMEM57Q8N5G2 664 aa13.1□□□□□ -0.31
TOP3B-210ENST00000444502 NEXNQ0ZGT2 675 aa13.09□□□□□ -0.31
TOP3B-210ENST00000444502 ACEP12821 1306 aa13.09□□□□□ -0.31
TOP3B-210ENST00000444502 ABCC1P33527 1531 aa13.09□□□□□ -0.31
TOP3B-210ENST00000444502 RBM42Q9BTD8 480 aaKnown RBP13.09□□□□□ -0.31
TOP3B-210ENST00000444502 KCNA6P17658 529 aa13.09□□□□□ -0.31
TOP3B-210ENST00000444502 ZCCHC11Q5TAX3 1644 aaKnown RBP13.09□□□□□ -0.31
TOP3B-210ENST00000444502 CDC42BPBQ9Y5S2 1711 aa13.09□□□□□ -0.31
TOP3B-210ENST00000444502 NPATQ14207 1427 aa13.08□□□□□ -0.32
TOP3B-210ENST00000444502 PLEKHO1Q53GL0 409 aaPredicted RBP13.08□□□□□ -0.32
TOP3B-210ENST00000444502 GAS2L2Q8NHY3 880 aa13.08□□□□□ -0.32
TOP3B-210ENST00000444502 RIMS2Q9UQ26 1411 aa13.08□□□□□ -0.32
TOP3B-210ENST00000444502 TATP17735 454 aaPredicted RBP13.08□□□□□ -0.32
TOP3B-210ENST00000444502 API5Q9BZZ5 524 aaKnown RBP13.08□□□□□ -0.32
TOP3B-210ENST00000444502 PIK3C2GO75747 1445 aa13.08□□□□□ -0.32
TOP3B-210ENST00000444502 CHRNA2Q15822 529 aa13.08□□□□□ -0.32
TOP3B-210ENST00000444502 KAT6BQ8WYB5 2073 aa13.08□□□□□ -0.32
TOP3B-210ENST00000444502 ANKRD36BQ8N2N9 1353 aa13.07□□□□□ -0.32
TOP3B-210ENST00000444502 MCM10Q7L590 875 aa13.07□□□□□ -0.32
TOP3B-210ENST00000444502 ANP32BQ92688 251 aaKnown RBP13.07□□□□□ -0.32
TOP3B-210ENST00000444502 RLBP1P12271 317 aa13.07□□□□□ -0.32
TOP3B-210ENST00000444502 POLR3AO14802 1390 aaPredicted RBP13.07□□□□□ -0.32
TOP3B-210ENST00000444502 GOLGA6L22H0YM25 854 aa13.06□□□□□ -0.32
TOP3B-210ENST00000444502 NFE2L2Q16236 605 aa13.06□□□□□ -0.32
TOP3B-210ENST00000444502 PCDHB15Q9Y5E8 787 aa13.06□□□□□ -0.32
TOP3B-210ENST00000444502 GOLGA6L3A6NEY3 463 aa13.06□□□□□ -0.32
TOP3B-210ENST00000444502 KIAA1211Q6ZU35 1233 aa13.06□□□□□ -0.32
TOP3B-210ENST00000444502 RRAGDQ9NQL2 400 aaPredicted RBP13.06□□□□□ -0.32
TOP3B-210ENST00000444502 ISY1Q9ULR0 285 aaKnown RBP13.06□□□□□ -0.32
TOP3B-210ENST00000444502 TRIM27P14373 513 aa13.06□□□□□ -0.32
TOP3B-210ENST00000444502 PHF23Q9BUL5 403 aaPredicted RBP13.06□□□□□ -0.32
TOP3B-210ENST00000444502 C22orf23Q9BZE7 217 aa13.06□□□□□ -0.32
TOP3B-210ENST00000444502 KRT28Q7Z3Y7 464 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms