RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 TMPOP42166 694 aaKnown RBP13.19□□□□□ -0.3
TOP3B-210ENST00000444502 PDE4CQ08493 712 aa13.19□□□□□ -0.3
TOP3B-210ENST00000444502 RBM10P98175 930 aaKnown RBP13.18□□□□□ -0.3
TOP3B-210ENST00000444502 WDR63Q8IWG1 891 aa13.18□□□□□ -0.3
TOP3B-210ENST00000444502 LNPKQ9C0E8 428 aa13.18□□□□□ -0.3
TOP3B-210ENST00000444502 FRAT2O75474 233 aaPredicted RBP13.18□□□□□ -0.3
TOP3B-210ENST00000444502 FKBP5Q13451 457 aaPredicted RBP13.18□□□□□ -0.3
TOP3B-210ENST00000444502 TAF7LQ5H9L4 462 aa13.18□□□□□ -0.3
TOP3B-210ENST00000444502 ATAD2Q6PL18 1390 aa13.18□□□□□ -0.3
TOP3B-210ENST00000444502 FGD1P98174 961 aa13.18□□□□□ -0.3
TOP3B-210ENST00000444502 AIMP1Q12904 312 aaKnown RBP13.18□□□□□ -0.3
TOP3B-210ENST00000444502 HSCBQ8IWL3 235 aa13.18□□□□□ -0.3
TOP3B-210ENST00000444502 PDZRN3Q9UPQ7 1066 aa13.18□□□□□ -0.3
TOP3B-210ENST00000444502 MAST1Q9Y2H9 1570 aa13.17□□□□□ -0.3
TOP3B-210ENST00000444502 WASLO00401 505 aaPredicted RBP13.17□□□□□ -0.3
TOP3B-210ENST00000444502 RARSP54136 660 aaKnown RBP13.17□□□□□ -0.3
TOP3B-210ENST00000444502 DDX54Q8TDD1 881 aaKnown RBP13.17□□□□□ -0.3
TOP3B-210ENST00000444502 NOB1Q9ULX3 412 aaKnown RBP13.17□□□□□ -0.3
TOP3B-210ENST00000444502 ASXL1Q8IXJ9 1541 aa13.17□□□□□ -0.3
TOP3B-210ENST00000444502 DMRT2Q9Y5R5 561 aa13.17□□□□□ -0.3
TOP3B-210ENST00000444502 TOM1L2Q6ZVM7 507 aa13.17□□□□□ -0.3
TOP3B-210ENST00000444502 ATP7AQ04656 1500 aa13.16□□□□□ -0.3
TOP3B-210ENST00000444502 EMILIN1Q9Y6C2 1016 aa13.16□□□□□ -0.3
TOP3B-210ENST00000444502 BCORL1Q5H9F3 1711 aa13.16□□□□□ -0.3
TOP3B-210ENST00000444502 C1orf115Q9H7X2 142 aa13.16□□□□□ -0.3
TOP3B-210ENST00000444502 FOXD4L1Q9NU39 408 aa13.15□□□□□ -0.3
TOP3B-210ENST00000444502 PPP6R1Q9UPN7 881 aa13.15□□□□□ -0.3
TOP3B-210ENST00000444502 PHF8Q9UPP1 1060 aa13.15□□□□□ -0.3
TOP3B-210ENST00000444502 PREX2Q70Z35 1606 aa13.15□□□□□ -0.3
TOP3B-210ENST00000444502 USHBP1Q8N6Y0 703 aa13.15□□□□□ -0.3
TOP3B-210ENST00000444502 TNNQ9UQP3 1299 aa13.15□□□□□ -0.3
TOP3B-210ENST00000444502 MYO5CQ9NQX4 1742 aa13.15□□□□□ -0.3
TOP3B-210ENST00000444502 GORABQ5T7V8 394 aa13.14□□□□□ -0.31
TOP3B-210ENST00000444502 ATP10AO60312 1499 aa13.14□□□□□ -0.31
TOP3B-210ENST00000444502 GNAI1P63096 354 aa13.14□□□□□ -0.31
TOP3B-210ENST00000444502 ZMYM3Q14202 1370 aa13.14□□□□□ -0.31
TOP3B-210ENST00000444502 NKTRP30414 1462 aaKnown RBP13.14□□□□□ -0.31
TOP3B-210ENST00000444502 CHMP4AQ9BY43 222 aa13.14□□□□□ -0.31
TOP3B-210ENST00000444502 NCKAP5LQ9HCH0 1330 aa13.14□□□□□ -0.31
TOP3B-210ENST00000444502 EIF2AK4Q9P2K8 1649 aaKnown RBP13.14□□□□□ -0.31
TOP3B-210ENST00000444502 TRIM6-TRIM34B2RNG4 842 aa13.13□□□□□ -0.31
TOP3B-210ENST00000444502 FYB1O15117 783 aa13.13□□□□□ -0.31
TOP3B-210ENST00000444502 NCLP19338 710 aaKnown RBP13.13□□□□□ -0.31
TOP3B-210ENST00000444502 L1TD1Q5T7N2 865 aaKnown RBP13.13□□□□□ -0.31
TOP3B-210ENST00000444502 MAGI2Q86UL8 1455 aa13.13□□□□□ -0.31
TOP3B-210ENST00000444502 UGGT1Q9NYU2 1555 aa13.13□□□□□ -0.31
TOP3B-210ENST00000444502 UHRF1BP1LA0JNW5 1464 aa13.13□□□□□ -0.31
TOP3B-210ENST00000444502 RNF123Q5XPI4 1314 aa13.13□□□□□ -0.31
TOP3B-210ENST00000444502 RRP9O43818 475 aaKnown RBP13.13□□□□□ -0.31
TOP3B-210ENST00000444502 IGHDP01880 384 aa13.13□□□□□ -0.31
TOP3B-210ENST00000444502 SSH1Q8WYL5 1049 aa13.13□□□□□ -0.31
TOP3B-210ENST00000444502 ADCY10Q96PN6 1610 aa13.13□□□□□ -0.31
TOP3B-210ENST00000444502 ADAMTS2O95450 1211 aa13.13□□□□□ -0.31
TOP3B-210ENST00000444502 DCTN1Q14203 1278 aa13.13□□□□□ -0.31
TOP3B-210ENST00000444502 KIF16BQ96L93 1317 aa13.12□□□□□ -0.31
TOP3B-210ENST00000444502 C9orf78Q9NZ63 289 aaPredicted RBP13.12□□□□□ -0.31
TOP3B-210ENST00000444502 ZNF530Q6P9A1 599 aaPredicted RBP13.12□□□□□ -0.31
TOP3B-210ENST00000444502 HMMRO75330 724 aa13.12□□□□□ -0.31
TOP3B-210ENST00000444502 MVPQ14764 893 aaKnown RBP13.11□□□□□ -0.31
TOP3B-210ENST00000444502 ATF7IPQ6VMQ6 1270 aa13.11□□□□□ -0.31
TOP3B-210ENST00000444502 MIS18AQ9NYP9 233 aa13.11□□□□□ -0.31
TOP3B-210ENST00000444502 KDM5DQ9BY66 1539 aa13.1□□□□□ -0.31
TOP3B-210ENST00000444502 YEATS2Q9ULM3 1422 aa13.1□□□□□ -0.31
TOP3B-210ENST00000444502 ZRANB1Q9UGI0 708 aa13.1□□□□□ -0.31
TOP3B-210ENST00000444502 TWISTNBQ3B726 338 aaPredicted RBP13.1□□□□□ -0.31
TOP3B-210ENST00000444502 FAM177BA6PVY3 158 aa13.1□□□□□ -0.31
TOP3B-210ENST00000444502 FCHSD2O94868 740 aa13.1□□□□□ -0.31
TOP3B-210ENST00000444502 TMEM57Q8N5G2 664 aa13.1□□□□□ -0.31
TOP3B-210ENST00000444502 NEXNQ0ZGT2 675 aa13.09□□□□□ -0.31
TOP3B-210ENST00000444502 ACEP12821 1306 aa13.09□□□□□ -0.31
TOP3B-210ENST00000444502 ABCC1P33527 1531 aa13.09□□□□□ -0.31
TOP3B-210ENST00000444502 RBM42Q9BTD8 480 aaKnown RBP13.09□□□□□ -0.31
TOP3B-210ENST00000444502 KCNA6P17658 529 aa13.09□□□□□ -0.31
TOP3B-210ENST00000444502 ZCCHC11Q5TAX3 1644 aaKnown RBP13.09□□□□□ -0.31
TOP3B-210ENST00000444502 CDC42BPBQ9Y5S2 1711 aa13.09□□□□□ -0.31
TOP3B-210ENST00000444502 NPATQ14207 1427 aa13.08□□□□□ -0.32
TOP3B-210ENST00000444502 PLEKHO1Q53GL0 409 aaPredicted RBP13.08□□□□□ -0.32
TOP3B-210ENST00000444502 GAS2L2Q8NHY3 880 aa13.08□□□□□ -0.32
TOP3B-210ENST00000444502 RIMS2Q9UQ26 1411 aa13.08□□□□□ -0.32
TOP3B-210ENST00000444502 TATP17735 454 aaPredicted RBP13.08□□□□□ -0.32
TOP3B-210ENST00000444502 API5Q9BZZ5 524 aaKnown RBP13.08□□□□□ -0.32
TOP3B-210ENST00000444502 PIK3C2GO75747 1445 aa13.08□□□□□ -0.32
TOP3B-210ENST00000444502 CHRNA2Q15822 529 aa13.08□□□□□ -0.32
TOP3B-210ENST00000444502 KAT6BQ8WYB5 2073 aa13.08□□□□□ -0.32
TOP3B-210ENST00000444502 ANKRD36BQ8N2N9 1353 aa13.07□□□□□ -0.32
TOP3B-210ENST00000444502 MCM10Q7L590 875 aa13.07□□□□□ -0.32
TOP3B-210ENST00000444502 ANP32BQ92688 251 aaKnown RBP13.07□□□□□ -0.32
TOP3B-210ENST00000444502 RLBP1P12271 317 aa13.07□□□□□ -0.32
TOP3B-210ENST00000444502 POLR3AO14802 1390 aaPredicted RBP13.07□□□□□ -0.32
TOP3B-210ENST00000444502 GOLGA6L22H0YM25 854 aa13.06□□□□□ -0.32
TOP3B-210ENST00000444502 NFE2L2Q16236 605 aa13.06□□□□□ -0.32
TOP3B-210ENST00000444502 PCDHB15Q9Y5E8 787 aa13.06□□□□□ -0.32
TOP3B-210ENST00000444502 GOLGA6L3A6NEY3 463 aa13.06□□□□□ -0.32
TOP3B-210ENST00000444502 KIAA1211Q6ZU35 1233 aa13.06□□□□□ -0.32
TOP3B-210ENST00000444502 RRAGDQ9NQL2 400 aaPredicted RBP13.06□□□□□ -0.32
TOP3B-210ENST00000444502 ISY1Q9ULR0 285 aaKnown RBP13.06□□□□□ -0.32
TOP3B-210ENST00000444502 TRIM27P14373 513 aa13.06□□□□□ -0.32
TOP3B-210ENST00000444502 PHF23Q9BUL5 403 aaPredicted RBP13.06□□□□□ -0.32
TOP3B-210ENST00000444502 C22orf23Q9BZE7 217 aa13.06□□□□□ -0.32
TOP3B-210ENST00000444502 KRT28Q7Z3Y7 464 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms