RNA–Protein interactions for RNA: ENST00000444220.2

AP000347.1-208, human

TSL 4

Gene AP000347.1, Length 618 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AP000347.1-208	ENST00000444220	UPF1	Q92900	1129 aa	Known RBP eCLIP	32.66	■■■□□ 2.82
AP000347.1-208	ENST00000444220	PHRF1	Q9P1Y6	1649 aa	Known RBP	32.66	■■■□□ 2.82
AP000347.1-208	ENST00000444220	NRAP	Q86VF7	1730 aa		32.65	■■■□□ 2.82
AP000347.1-208	ENST00000444220	UNC5CL	Q8IV45	518 aa		32.65	■■■□□ 2.82
AP000347.1-208	ENST00000444220	ACE	P12821	1306 aa		32.65	■■■□□ 2.82
AP000347.1-208	ENST00000444220	PLEKHG3	A1L390	1219 aa		32.64	■■■□□ 2.82
AP000347.1-208	ENST00000444220	PAK3	O75914	559 aa	Predicted RBP	32.63	■■■□□ 2.81
AP000347.1-208	ENST00000444220	SRPK2	P78362	688 aa	Known RBP	32.63	■■■□□ 2.81
AP000347.1-208	ENST00000444220	CABP2	Q9NPB3	220 aa		32.63	■■■□□ 2.81
AP000347.1-208	ENST00000444220	COL14A1	Q05707	1796 aa	Known RBP	32.63	■■■□□ 2.81
AP000347.1-208	ENST00000444220	PPIP5K1	Q6PFW1	1433 aa		32.62	■■■□□ 2.81
AP000347.1-208	ENST00000444220	RALGAPB	Q86X10	1494 aa		32.61	■■■□□ 2.81
AP000347.1-208	ENST00000444220	GJD4	Q96KN9	370 aa	Predicted RBP	32.61	■■■□□ 2.81
AP000347.1-208	ENST00000444220	TONSL	Q96HA7	1378 aa		32.6	■■■□□ 2.81
AP000347.1-208	ENST00000444220	FAM83G	A6ND36	823 aa		32.59	■■■□□ 2.81
AP000347.1-208	ENST00000444220	BRWD3	Q6RI45	1802 aa		32.58	■■■□□ 2.81
AP000347.1-208	ENST00000444220	EVC2	Q86UK5	1308 aa		32.52	■■■□□ 2.8
AP000347.1-208	ENST00000444220	VPS72	Q15906	364 aa		32.52	■■■□□ 2.8
AP000347.1-208	ENST00000444220	NRK	Q7Z2Y5	1582 aa		32.52	■■■□□ 2.8
AP000347.1-208	ENST00000444220	AKAP12	Q02952	1782 aa		32.51	■■■□□ 2.79
AP000347.1-208	ENST00000444220	NUTM2G	Q5VZR2	741 aa		32.5	■■■□□ 2.79
AP000347.1-208	ENST00000444220	CABP1	Q9NZU7	370 aa		32.49	■■■□□ 2.79
AP000347.1-208	ENST00000444220	ATAD2	Q6PL18	1390 aa		32.48	■■■□□ 2.79
AP000347.1-208	ENST00000444220	USP6	P35125	1406 aa		32.47	■■■□□ 2.79
AP000347.1-208	ENST00000444220	CARD11	Q9BXL7	1154 aa		32.47	■■■□□ 2.79
AP000347.1-208	ENST00000444220	BTG4	Q9NY30	223 aa		32.47	■■■□□ 2.79
AP000347.1-208	ENST00000444220	SBNO2	Q9Y2G9	1366 aa		32.45	■■■□□ 2.79
AP000347.1-208	ENST00000444220	KIAA0232	Q92628	1395 aa		32.45	■■■□□ 2.78
AP000347.1-208	ENST00000444220	ABTB2	Q8N961	1025 aa		32.44	■■■□□ 2.78
AP000347.1-208	ENST00000444220	PRDM11	Q9NQV5	511 aa		32.44	■■■□□ 2.78
AP000347.1-208	ENST00000444220	PIK3C2A	O00443	1686 aa		32.43	■■■□□ 2.78
AP000347.1-208	ENST00000444220	USP19	O94966	1318 aa		32.43	■■■□□ 2.78
AP000347.1-208	ENST00000444220	BRD4	O60885	1362 aa	Predicted RBP	32.43	■■■□□ 2.78
AP000347.1-208	ENST00000444220	CCDC9	Q9Y3X0	531 aa	Known RBP	32.42	■■■□□ 2.78
AP000347.1-208	ENST00000444220	SSH2	Q76I76	1423 aa		32.42	■■■□□ 2.78
AP000347.1-208	ENST00000444220	EP400	Q96L91	3159 aa		32.4	■■■□□ 2.78
AP000347.1-208	ENST00000444220	LMO7	Q8WWI1	1683 aa		32.39	■■■□□ 2.78
AP000347.1-208	ENST00000444220	MON2	Q7Z3U7	1717 aa		32.38	■■■□□ 2.77
AP000347.1-208	ENST00000444220	ONECUT3	O60422	494 aa	Predicted RBP	32.38	■■■□□ 2.77
AP000347.1-208	ENST00000444220	ZC3H6	P61129	1189 aa	Known RBP	32.38	■■■□□ 2.77
AP000347.1-208	ENST00000444220	CHRNA2	Q15822	529 aa		32.38	■■■□□ 2.77
AP000347.1-208	ENST00000444220	SEPT12	Q8IYM1	358 aa		32.37	■■■□□ 2.77
AP000347.1-208	ENST00000444220	SLIT3	O75094	1523 aa		32.36	■■■□□ 2.77
AP000347.1-208	ENST00000444220	NLRP13	Q86W25	1043 aa		32.35	■■■□□ 2.77
AP000347.1-208	ENST00000444220	CPSF1	Q10570	1443 aa	Known RBP	32.34	■■■□□ 2.77
AP000347.1-208	ENST00000444220	THSD7A	Q9UPZ6	1657 aa		32.34	■■■□□ 2.77
AP000347.1-208	ENST00000444220	CPD	O75976	1380 aa		32.33	■■■□□ 2.77
AP000347.1-208	ENST00000444220	CAMTA1	Q9Y6Y1	1673 aa		32.33	■■■□□ 2.77
AP000347.1-208	ENST00000444220	SPATA31A5	Q5VU36	1347 aa		32.32	■■■□□ 2.76
AP000347.1-208	ENST00000444220	SPATA31A7	Q8IWB4	1347 aa		32.32	■■■□□ 2.76
AP000347.1-208	ENST00000444220	GC	P02774	474 aa		32.29	■■■□□ 2.76
AP000347.1-208	ENST00000444220	FAM98C	Q17RN3	349 aa	Known RBP	32.29	■■■□□ 2.76
AP000347.1-208	ENST00000444220	CD163L1	Q9NR16	1453 aa		32.29	■■■□□ 2.76
AP000347.1-208	ENST00000444220	NLRP6	P59044	892 aa		32.28	■■■□□ 2.76
AP000347.1-208	ENST00000444220	ZNF692	Q9BU19	519 aa	Predicted RBP	32.27	■■■□□ 2.76
AP000347.1-208	ENST00000444220	COL18A1	P39060	1754 aa		32.27	■■■□□ 2.76
AP000347.1-208	ENST00000444220	TTC21B	Q7Z4L5	1316 aa		32.26	■■■□□ 2.76
AP000347.1-208	ENST00000444220	STRN4	Q9NRL3	753 aa		32.26	■■■□□ 2.75
AP000347.1-208	ENST00000444220	SPATA31A1	Q5TZJ5	1347 aa		32.25	■■■□□ 2.75
AP000347.1-208	ENST00000444220	KTN1	Q86UP2	1357 aa	Known RBP	32.24	■■■□□ 2.75
AP000347.1-208	ENST00000444220	KRT27	Q7Z3Y8	459 aa		32.24	■■■□□ 2.75
AP000347.1-208	ENST00000444220		A0A0G2JS52	829 aa		32.23	■■■□□ 2.75
AP000347.1-208	ENST00000444220	MYT1	Q01538	1121 aa		32.23	■■■□□ 2.75
AP000347.1-208	ENST00000444220	TESK2	Q96S53	571 aa		32.23	■■■□□ 2.75
AP000347.1-208	ENST00000444220	USP54	Q70EL1	1684 aa		32.23	■■■□□ 2.75
AP000347.1-208	ENST00000444220	RGPD5	Q99666	1765 aa		32.22	■■■□□ 2.75
AP000347.1-208	ENST00000444220	TTC21A	Q8NDW8	1320 aa		32.22	■■■□□ 2.75
AP000347.1-208	ENST00000444220	ST20-MTHFS	A0A0A6YYL1	179 aa		32.21	■■■□□ 2.75
AP000347.1-208	ENST00000444220	PCGF6	Q9BYE7	350 aa		32.21	■■■□□ 2.75
AP000347.1-208	ENST00000444220	BLM	P54132	1417 aa	Predicted RBP	32.2	■■■□□ 2.75
AP000347.1-208	ENST00000444220	CCDC125	Q86Z20	511 aa		32.2	■■■□□ 2.75
AP000347.1-208	ENST00000444220	COL5A2	P05997	1499 aa	Predicted RBP	32.2	■■■□□ 2.75
AP000347.1-208	ENST00000444220	CLSPN	Q9HAW4	1339 aa		32.17	■■■□□ 2.74
AP000347.1-208	ENST00000444220	NFAT5	O94916	1531 aa		32.16	■■■□□ 2.74
AP000347.1-208	ENST00000444220	EVA1C	P58658	441 aa		32.16	■■■□□ 2.74
AP000347.1-208	ENST00000444220	LARP1	Q6PKG0	1096 aa	Known RBP	32.16	■■■□□ 2.74
AP000347.1-208	ENST00000444220	SLC12A5	Q9H2X9	1139 aa		32.16	■■■□□ 2.74
AP000347.1-208	ENST00000444220	TMC1	Q8TDI8	760 aa		32.15	■■■□□ 2.74
AP000347.1-208	ENST00000444220	PUS7	Q96PZ0	661 aa	Known RBP	32.15	■■■□□ 2.74
AP000347.1-208	ENST00000444220	AATK	Q6ZMQ8	1374 aa		32.15	■■■□□ 2.74
AP000347.1-208	ENST00000444220	ZBTB7C	A1YPR0	619 aa		32.13	■■■□□ 2.73
AP000347.1-208	ENST00000444220	USP47	Q96K76	1375 aa		32.13	■■■□□ 2.73
AP000347.1-208	ENST00000444220	USP35	Q9P2H5	1018 aa		32.13	■■■□□ 2.73
AP000347.1-208	ENST00000444220		A0A1W2PP64	1363 aa		32.12	■■■□□ 2.73
AP000347.1-208	ENST00000444220	ZRANB1	Q9UGI0	708 aa		32.11	■■■□□ 2.73
AP000347.1-208	ENST00000444220	WNK3	Q9BYP7	1800 aa		32.11	■■■□□ 2.73
AP000347.1-208	ENST00000444220	RGPD1	P0DJD0	1748 aa		32.11	■■■□□ 2.73
AP000347.1-208	ENST00000444220	USP31	Q70CQ4	1352 aa		32.1	■■■□□ 2.73
AP000347.1-208	ENST00000444220	LTN1	O94822	1766 aa		32.1	■■■□□ 2.73
AP000347.1-208	ENST00000444220	FAM182B	Q5T319	152 aa		32.1	■■■□□ 2.73
AP000347.1-208	ENST00000444220	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	32.1	■■■□□ 2.73
AP000347.1-208	ENST00000444220	TIMELESS	Q9UNS1	1208 aa		32.1	■■■□□ 2.73
AP000347.1-208	ENST00000444220	PARP4	Q9UKK3	1724 aa	Known RBP	32.09	■■■□□ 2.73
AP000347.1-208	ENST00000444220	BARGIN	Q6ZT62	677 aa		32.09	■■■□□ 2.73
AP000347.1-208	ENST00000444220	EDC4	Q6P2E9	1401 aa	Known RBP	32.09	■■■□□ 2.73
AP000347.1-208	ENST00000444220	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	32.08	■■■□□ 2.73
AP000347.1-208	ENST00000444220	ARHGEF25	Q86VW2	580 aa		32.08	■■■□□ 2.73
AP000347.1-208	ENST00000444220	NME9	Q86XW9	330 aa		32.08	■■■□□ 2.73
AP000347.1-208	ENST00000444220	KCNH5	Q8NCM2	988 aa		32.08	■■■□□ 2.73
AP000347.1-208	ENST00000444220	TNS1	Q9HBL0	1735 aa	Known RBP	32.08	■■■□□ 2.73

Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms