RNA–Protein interactions for RNA: ENST00000443977.1

PRKD3-204, Transcript of protein kinase D3, humanhuman

TSL 3

Gene PRKD3, Length 518 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-204ENST00000443977 KIF21BO75037 1637 aa6.67□□□□□ -1.34
PRKD3-204ENST00000443977 BAZ1BQ9UIG0 1483 aaKnown RBP6.66□□□□□ -1.34
PRKD3-204ENST00000443977 SCARF1Q14162 830 aa6.66□□□□□ -1.34
PRKD3-204ENST00000443977 SIAH2O43255 324 aa6.65□□□□□ -1.34
PRKD3-204ENST00000443977 HOXA2O43364 376 aa6.65□□□□□ -1.34
PRKD3-204ENST00000443977 LORP23490 312 aaPredicted RBP6.65□□□□□ -1.34
PRKD3-204ENST00000443977 ATAD2BQ9ULI0 1458 aa6.65□□□□□ -1.35
PRKD3-204ENST00000443977 PLEKHG3A1L390 1219 aa6.64□□□□□ -1.35
PRKD3-204ENST00000443977 RETREG3Q86VR2 466 aa6.64□□□□□ -1.35
PRKD3-204ENST00000443977 ZFP42Q96MM3 310 aa6.64□□□□□ -1.35
PRKD3-204ENST00000443977 ERBB4Q15303 1308 aa6.64□□□□□ -1.35
PRKD3-204ENST00000443977 DIEXFQ68CQ4 756 aaKnown RBP6.63□□□□□ -1.35
PRKD3-204ENST00000443977 CLIP1P30622 1438 aa6.62□□□□□ -1.35
PRKD3-204ENST00000443977 CCNYL3P0C7X3 344 aa6.62□□□□□ -1.35
PRKD3-204ENST00000443977 MAP2K5Q13163 448 aa6.62□□□□□ -1.35
PRKD3-204ENST00000443977 HLA-CQ95604 372 aa6.62□□□□□ -1.35
PRKD3-204ENST00000443977 BCANQ96GW7 911 aa6.62□□□□□ -1.35
PRKD3-204ENST00000443977 MS4A1P11836 297 aa6.61□□□□□ -1.35
PRKD3-204ENST00000443977 SUZ12Q15022 739 aaKnown RBP6.61□□□□□ -1.35
PRKD3-204ENST00000443977 MRPL14Q6P1L8 145 aaKnown RBP6.61□□□□□ -1.35
PRKD3-204ENST00000443977 NUTM1Q86Y26 1132 aa6.61□□□□□ -1.35
PRKD3-204ENST00000443977 VPS8Q8N3P4 1428 aa6.6□□□□□ -1.35
PRKD3-204ENST00000443977 VSIG8P0DPA2 414 aa6.6□□□□□ -1.35
PRKD3-204ENST00000443977 SH3BP2P78314 561 aa6.6□□□□□ -1.35
PRKD3-204ENST00000443977 MDM2Q00987 491 aaPredicted RBP6.6□□□□□ -1.35
PRKD3-204ENST00000443977 NNTQ13423 1086 aa6.6□□□□□ -1.35
PRKD3-204ENST00000443977 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.6□□□□□ -1.35
PRKD3-204ENST00000443977 SYNJ1O43426 1573 aa6.6□□□□□ -1.35
PRKD3-204ENST00000443977 RUSC2Q8N2Y8 1516 aa6.6□□□□□ -1.35
PRKD3-204ENST00000443977 TOP2BQ02880 1626 aa6.59□□□□□ -1.35
PRKD3-204ENST00000443977 TULP1O00294 542 aaPredicted RBP6.59□□□□□ -1.35
PRKD3-204ENST00000443977 ADH1CP00326 375 aa6.59□□□□□ -1.35
PRKD3-204ENST00000443977 GUCA2AQ02747 115 aa6.59□□□□□ -1.35
PRKD3-204ENST00000443977 PTCRAQ6ISU1 281 aaPredicted RBP6.59□□□□□ -1.35
PRKD3-204ENST00000443977 PURBQ96QR8 312 aaKnown RBP6.59□□□□□ -1.35
PRKD3-204ENST00000443977 TLL2Q9Y6L7 1015 aa6.59□□□□□ -1.35
PRKD3-204ENST00000443977 CLSPNQ9HAW4 1339 aa6.58□□□□□ -1.36
PRKD3-204ENST00000443977 ACIN1Q9UKV3 1341 aaKnown RBP6.58□□□□□ -1.36
PRKD3-204ENST00000443977 C6orf229H3BNL8 230 aa6.58□□□□□ -1.36
PRKD3-204ENST00000443977 RNF225M0QZC1 329 aaPredicted RBP6.58□□□□□ -1.36
PRKD3-204ENST00000443977 VARSP26640 1264 aaKnown RBP6.58□□□□□ -1.36
PRKD3-204ENST00000443977 KCNMA1Q12791 1236 aa6.58□□□□□ -1.36
PRKD3-204ENST00000443977 PTPRNQ16849 979 aa6.58□□□□□ -1.36
PRKD3-204ENST00000443977 SYMPKQ92797 1274 aaKnown RBP6.58□□□□□ -1.36
PRKD3-204ENST00000443977 UNC93B1Q9H1C4 597 aa6.58□□□□□ -1.36
PRKD3-204ENST00000443977 ERICH3Q5RHP9 1530 aa6.58□□□□□ -1.36
PRKD3-204ENST00000443977 BIVM-ERCC5R4GMW8 1640 aa6.58□□□□□ -1.36
PRKD3-204ENST00000443977 TTBK1Q5TCY1 1321 aaPredicted RBP6.57□□□□□ -1.36
PRKD3-204ENST00000443977 HMGXB3Q12766 1538 aa6.57□□□□□ -1.36
PRKD3-204ENST00000443977 CLCN1P35523 988 aa6.57□□□□□ -1.36
PRKD3-204ENST00000443977 WDR4P57081 412 aaKnown RBP6.57□□□□□ -1.36
PRKD3-204ENST00000443977 LINC01559Q495D7 138 aa6.57□□□□□ -1.36
PRKD3-204ENST00000443977 MPNDQ8N594 471 aa6.57□□□□□ -1.36
PRKD3-204ENST00000443977 KRI1Q8N9T8 703 aaKnown RBP6.57□□□□□ -1.36
PRKD3-204ENST00000443977 NCAPD3P42695 1498 aa6.56□□□□□ -1.36
PRKD3-204ENST00000443977 MAN1A2O60476 641 aa6.56□□□□□ -1.36
PRKD3-204ENST00000443977 FDX1P10109 184 aa6.56□□□□□ -1.36
PRKD3-204ENST00000443977 KCTD17Q8N5Z5 321 aa6.56□□□□□ -1.36
PRKD3-204ENST00000443977 ZNF511Q8NB15 262 aa6.56□□□□□ -1.36
PRKD3-204ENST00000443977 GPCPD1Q9NPB8 672 aa6.56□□□□□ -1.36
PRKD3-204ENST00000443977 IRF6O14896 467 aa6.55□□□□□ -1.36
PRKD3-204ENST00000443977 UPP2O95045 317 aa6.55□□□□□ -1.36
PRKD3-204ENST00000443977 TIMP2P16035 220 aa6.55□□□□□ -1.36
PRKD3-204ENST00000443977 FAM174AQ8TBP5 190 aa6.55□□□□□ -1.36
PRKD3-204ENST00000443977 MINK1Q8N4C8 1332 aaPredicted RBP6.54□□□□□ -1.36
PRKD3-204ENST00000443977 KIF27Q86VH2 1401 aa6.54□□□□□ -1.36
PRKD3-204ENST00000443977 KCNH2Q12809 1159 aa6.54□□□□□ -1.36
PRKD3-204ENST00000443977 TMEM151AQ8N4L1 468 aa6.54□□□□□ -1.36
PRKD3-204ENST00000443977 BAP1Q92560 729 aa6.54□□□□□ -1.36
PRKD3-204ENST00000443977 EVA1BQ9NVM1 165 aa6.54□□□□□ -1.36
PRKD3-204ENST00000443977 RAPGEF2Q9Y4G8 1499 aa6.53□□□□□ -1.36
PRKD3-204ENST00000443977 SOBPA7XYQ1 873 aa6.53□□□□□ -1.36
PRKD3-204ENST00000443977 FAM217BQ9NTX9 383 aaPredicted RBP6.53□□□□□ -1.36
PRKD3-204ENST00000443977 PRDM2Q13029 1718 aa6.51□□□□□ -1.37
PRKD3-204ENST00000443977 SPDYE5A6NIY4 337 aa6.51□□□□□ -1.37
PRKD3-204ENST00000443977 GDF11O95390 407 aa6.51□□□□□ -1.37
PRKD3-204ENST00000443977 C6orf118Q5T5N4 469 aa6.51□□□□□ -1.37
PRKD3-204ENST00000443977 ZC3H15Q8WU90 426 aaKnown RBP6.51□□□□□ -1.37
PRKD3-204ENST00000443977 PRXQ9BXM0 1461 aa6.51□□□□□ -1.37
PRKD3-204ENST00000443977 PPFIA3O75145 1194 aa6.5□□□□□ -1.37
PRKD3-204ENST00000443977 ZIC2O95409 532 aaPredicted RBP6.5□□□□□ -1.37
PRKD3-204ENST00000443977 RASSF7Q02833 373 aa6.5□□□□□ -1.37
PRKD3-204ENST00000443977 DESI1Q6ICB0 168 aa6.5□□□□□ -1.37
PRKD3-204ENST00000443977 PRR7Q8TB68 274 aa6.5□□□□□ -1.37
PRKD3-204ENST00000443977 CCDC102AQ96A19 550 aa6.5□□□□□ -1.37
PRKD3-204ENST00000443977 CFTRP13569 1480 aa6.49□□□□□ -1.37
PRKD3-204ENST00000443977 BMP2P12643 396 aa6.49□□□□□ -1.37
PRKD3-204ENST00000443977 CTHP32929 405 aa6.49□□□□□ -1.37
PRKD3-204ENST00000443977 NR5A1Q13285 461 aa6.49□□□□□ -1.37
PRKD3-204ENST00000443977 NEUROD1Q13562 356 aa6.49□□□□□ -1.37
PRKD3-204ENST00000443977 ARID5BQ14865 1188 aa6.49□□□□□ -1.37
PRKD3-204ENST00000443977 PCDHGC3Q9UN70 934 aa6.49□□□□□ -1.37
PRKD3-204ENST00000443977 MTMR2Q13614 643 aa6.48□□□□□ -1.37
PRKD3-204ENST00000443977 SPTLC1O15269 473 aa6.47□□□□□ -1.37
PRKD3-204ENST00000443977 RANGAP1P46060 587 aaPredicted RBP6.47□□□□□ -1.37
PRKD3-204ENST00000443977 AGERQ15109 404 aa6.47□□□□□ -1.37
PRKD3-204ENST00000443977 LINC00528Q8N1L1 170 aa6.47□□□□□ -1.37
PRKD3-204ENST00000443977 CDK15Q96Q40 435 aa6.47□□□□□ -1.37
PRKD3-204ENST00000443977 KLF16Q9BXK1 252 aaPredicted RBP6.47□□□□□ -1.37
PRKD3-204ENST00000443977 ZFAND3Q9H8U3 227 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms