RNA–Protein interactions for RNA: ENST00000443875.5

C1S-208, Transcript of complement C1s, humanhuman

TSL 2

Gene C1S, Length 2,550 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1S-208ENST00000443875 ERCC6Q03468 1493 aa11.92□□□□□ -0.5
C1S-208ENST00000443875 NCLP19338 710 aaKnown RBP11.91□□□□□ -0.5
C1S-208ENST00000443875 ITPRIPQ8IWB1 547 aa11.91□□□□□ -0.5
C1S-208ENST00000443875 CDC42BPBQ9Y5S2 1711 aa11.91□□□□□ -0.5
C1S-208ENST00000443875 RSPH4AQ5TD94 716 aa11.91□□□□□ -0.5
C1S-208ENST00000443875 LNPKQ9C0E8 428 aa11.91□□□□□ -0.5
C1S-208ENST00000443875 IFT140Q96RY7 1462 aa11.91□□□□□ -0.5
C1S-208ENST00000443875 PREX2Q70Z35 1606 aa11.9□□□□□ -0.5
C1S-208ENST00000443875 CT47B1P0C2W7 299 aaPredicted RBP11.9□□□□□ -0.5
C1S-208ENST00000443875 ATP10BO94823 1461 aa11.9□□□□□ -0.5
C1S-208ENST00000443875 CYP2E1P05181 493 aaPredicted RBP11.9□□□□□ -0.5
C1S-208ENST00000443875 SMC4Q9NTJ3 1288 aa11.9□□□□□ -0.5
C1S-208ENST00000443875 NUCB2P80303 420 aa11.89□□□□□ -0.51
C1S-208ENST00000443875 NCBP3Q53F19 620 aaKnown RBP11.89□□□□□ -0.51
C1S-208ENST00000443875 CHD1LQ86WJ1 897 aa11.89□□□□□ -0.51
C1S-208ENST00000443875 MYRIPQ8NFW9 859 aa11.89□□□□□ -0.51
C1S-208ENST00000443875 ZBTB40Q9NUA8 1239 aa11.89□□□□□ -0.51
C1S-208ENST00000443875 KIF16BQ96L93 1317 aa11.89□□□□□ -0.51
C1S-208ENST00000443875 ATF7IPQ6VMQ6 1270 aa11.89□□□□□ -0.51
C1S-208ENST00000443875 SYCP2Q9BX26 1530 aa11.88□□□□□ -0.51
C1S-208ENST00000443875 KIAA1210Q9ULL0 1709 aa11.88□□□□□ -0.51
C1S-208ENST00000443875 LRSAM1Q6UWE0 723 aa11.88□□□□□ -0.51
C1S-208ENST00000443875 TBC1D9Q6ZT07 1266 aa11.88□□□□□ -0.51
C1S-208ENST00000443875 ADGRB2O60241 1585 aa11.88□□□□□ -0.51
C1S-208ENST00000443875 TMEM57Q8N5G2 664 aa11.87□□□□□ -0.51
C1S-208ENST00000443875 GPT2Q8TD30 523 aa11.87□□□□□ -0.51
C1S-208ENST00000443875 GTPBP4Q9BZE4 634 aaKnown RBP11.87□□□□□ -0.51
C1S-208ENST00000443875 RBM27Q9P2N5 1060 aaKnown RBP11.87□□□□□ -0.51
C1S-208ENST00000443875 ZNF518AQ6AHZ1 1483 aa11.87□□□□□ -0.51
C1S-208ENST00000443875 ZNF710Q8N1W2 664 aa11.87□□□□□ -0.51
C1S-208ENST00000443875 SSH1Q8WYL5 1049 aa11.87□□□□□ -0.51
C1S-208ENST00000443875 TSR2Q969E8 191 aaKnown RBP11.86□□□□□ -0.51
C1S-208ENST00000443875 STAC3Q96MF2 364 aa11.86□□□□□ -0.51
C1S-208ENST00000443875 ADGRL1O94910 1474 aa11.86□□□□□ -0.51
C1S-208ENST00000443875 CARMIL2Q6F5E8 1435 aa11.86□□□□□ -0.51
C1S-208ENST00000443875 SLC24A1O60721 1099 aa11.86□□□□□ -0.51
C1S-208ENST00000443875 KIF20AO95235 890 aa11.86□□□□□ -0.51
C1S-208ENST00000443875 TNNT2P45379 298 aaPredicted RBP11.86□□□□□ -0.51
C1S-208ENST00000443875 KIAA2012Q0VF49 1180 aa11.86□□□□□ -0.51
C1S-208ENST00000443875 MORC1Q86VD1 984 aa11.86□□□□□ -0.51
C1S-208ENST00000443875 NOS1P29475 1434 aa11.86□□□□□ -0.51
C1S-208ENST00000443875 EXOSC9Q06265 439 aaKnown RBP11.85□□□□□ -0.51
C1S-208ENST00000443875 PRPF40AO75400 957 aaKnown RBP11.85□□□□□ -0.51
C1S-208ENST00000443875 PKP1Q13835 747 aa11.85□□□□□ -0.51
C1S-208ENST00000443875 TMEM63CQ9P1W3 806 aa11.85□□□□□ -0.51
C1S-208ENST00000443875 NOB1Q9ULX3 412 aaKnown RBP11.85□□□□□ -0.51
C1S-208ENST00000443875 TRPM2O94759 1503 aa11.85□□□□□ -0.51
C1S-208ENST00000443875 NSD3Q9BZ95 1437 aa11.85□□□□□ -0.51
C1S-208ENST00000443875 REREQ9P2R6 1566 aa11.84□□□□□ -0.51
C1S-208ENST00000443875 GTF2F1P35269 517 aaKnown RBP eCLIP11.84□□□□□ -0.51
C1S-208ENST00000443875 RABEP1Q15276 862 aa11.84□□□□□ -0.51
C1S-208ENST00000443875 PPP4R3BQ5MIZ7 849 aa11.84□□□□□ -0.51
C1S-208ENST00000443875 PRIMPOLQ96LW4 560 aa11.84□□□□□ -0.51
C1S-208ENST00000443875 SYCE3A1L190 88 aa11.84□□□□□ -0.51
C1S-208ENST00000443875 JARID2Q92833 1246 aaPredicted RBP11.84□□□□□ -0.51
C1S-208ENST00000443875 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.84□□□□□ -0.51
C1S-208ENST00000443875 CLTCL1P53675 1640 aa11.84□□□□□ -0.51
C1S-208ENST00000443875 LETM1O95202 739 aaPredicted RBP11.83□□□□□ -0.52
C1S-208ENST00000443875 CBX1P83916 185 aa11.83□□□□□ -0.52
C1S-208ENST00000443875 ABCC11Q96J66 1382 aa11.83□□□□□ -0.52
C1S-208ENST00000443875 HMGN5P82970 282 aaKnown RBP11.82□□□□□ -0.52
C1S-208ENST00000443875 TSC1Q92574 1164 aa11.82□□□□□ -0.52
C1S-208ENST00000443875 CWC22Q9HCG8 908 aaKnown RBP11.82□□□□□ -0.52
C1S-208ENST00000443875 PPRC1Q5VV67 1664 aaKnown RBP11.82□□□□□ -0.52
C1S-208ENST00000443875 CDC45O75419 566 aa11.82□□□□□ -0.52
C1S-208ENST00000443875 PTMAP06454 111 aaKnown RBP11.82□□□□□ -0.52
C1S-208ENST00000443875 ATP2B3Q16720 1220 aa11.82□□□□□ -0.52
C1S-208ENST00000443875 ANKRD45Q5TZF3 282 aa11.82□□□□□ -0.52
C1S-208ENST00000443875 CFAP53Q96M91 514 aa11.82□□□□□ -0.52
C1S-208ENST00000443875 MTHFSP49914 203 aa11.81□□□□□ -0.52
C1S-208ENST00000443875 DNTTIP2Q5QJE6 756 aaKnown RBP11.81□□□□□ -0.52
C1S-208ENST00000443875 GCC1Q96CN9 775 aa11.81□□□□□ -0.52
C1S-208ENST00000443875 MED14O60244 1454 aa11.81□□□□□ -0.52
C1S-208ENST00000443875 PTPRTO14522 1441 aa11.81□□□□□ -0.52
C1S-208ENST00000443875 PPIP5K1Q6PFW1 1433 aa11.81□□□□□ -0.52
C1S-208ENST00000443875 MYO3AQ8NEV4 1616 aa11.81□□□□□ -0.52
C1S-208ENST00000443875 USP32Q8NFA0 1604 aa11.81□□□□□ -0.52
C1S-208ENST00000443875 RNF214Q8ND24 703 aa11.81□□□□□ -0.52
C1S-208ENST00000443875 BBXQ8WY36 941 aaPredicted RBP11.81□□□□□ -0.52
C1S-208ENST00000443875 NSFL1CQ9UNZ2 370 aaKnown RBP11.81□□□□□ -0.52
C1S-208ENST00000443875 ZDHHC9Q9Y397 364 aa11.81□□□□□ -0.52
C1S-208ENST00000443875 GTF2E1P29083 439 aaPredicted RBP11.8□□□□□ -0.52
C1S-208ENST00000443875 PIBF1Q8WXW3 757 aa11.8□□□□□ -0.52
C1S-208ENST00000443875 SBNO2Q9Y2G9 1366 aa11.8□□□□□ -0.52
C1S-208ENST00000443875 IPO8O15397 1037 aaKnown RBP11.8□□□□□ -0.52
C1S-208ENST00000443875 ABCA6Q8N139 1617 aa11.8□□□□□ -0.52
C1S-208ENST00000443875 MBD3O95983 291 aa11.79□□□□□ -0.52
C1S-208ENST00000443875 PDE4CQ08493 712 aa11.79□□□□□ -0.52
C1S-208ENST00000443875 CD109Q6YHK3 1445 aa11.79□□□□□ -0.52
C1S-208ENST00000443875 U2AF1L5P0DN76 240 aaPredicted RBP11.79□□□□□ -0.52
C1S-208ENST00000443875 U2AF1Q01081 240 aaKnown RBP eCLIP11.79□□□□□ -0.52
C1S-208ENST00000443875 ZGPATQ8N5A5 531 aaKnown RBP11.79□□□□□ -0.52
C1S-208ENST00000443875 ARHGAP5Q13017 1502 aa11.79□□□□□ -0.52
C1S-208ENST00000443875 MAP3K4Q9Y6R4 1608 aa11.78□□□□□ -0.52
C1S-208ENST00000443875 MRC2Q9UBG0 1479 aa11.78□□□□□ -0.52
C1S-208ENST00000443875 ZBTB7CA1YPR0 619 aa11.78□□□□□ -0.52
C1S-208ENST00000443875 NOLC1Q14978 699 aaKnown RBP eCLIP11.78□□□□□ -0.52
C1S-208ENST00000443875 TSPY26PQ9H489 355 aa11.78□□□□□ -0.52
C1S-208ENST00000443875 KIF3AQ9Y496 699 aa11.78□□□□□ -0.52
C1S-208ENST00000443875 GSPT1P15170 499 aaKnown RBP11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms