RNA–Protein interactions for RNA: ENST00000443700.5

AP1S3-206, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best) BASIC

Gene AP1S3, Length 1,785 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-206ENST00000443700 NCOA3Q9Y6Q9 1424 aa19.47■□□□□ 0.71
AP1S3-206ENST00000443700 FSD2A1L4K1 749 aa19.47■□□□□ 0.71
AP1S3-206ENST00000443700 TRIM27P14373 513 aa19.47■□□□□ 0.71
AP1S3-206ENST00000443700 ITPRIPQ8IWB1 547 aa19.47■□□□□ 0.71
AP1S3-206ENST00000443700 PNNQ9H307 717 aaKnown RBP19.47■□□□□ 0.71
AP1S3-206ENST00000443700 KIF20BQ96Q89 1820 aa19.46■□□□□ 0.71
AP1S3-206ENST00000443700 EXOSC9Q06265 439 aaKnown RBP19.46■□□□□ 0.71
AP1S3-206ENST00000443700 ISY1Q9ULR0 285 aaKnown RBP19.46■□□□□ 0.71
AP1S3-206ENST00000443700 SIGLEC1Q9BZZ2 1709 aa19.46■□□□□ 0.71
AP1S3-206ENST00000443700 CDC42BPGQ6DT37 1551 aa19.46■□□□□ 0.71
AP1S3-206ENST00000443700 VGFO15240 615 aaPredicted RBP19.45■□□□□ 0.7
AP1S3-206ENST00000443700 IPO8O15397 1037 aaKnown RBP19.45■□□□□ 0.7
AP1S3-206ENST00000443700 TMPOP42166 694 aaKnown RBP19.45■□□□□ 0.7
AP1S3-206ENST00000443700 TMEM132EQ6IEE7 984 aa19.45■□□□□ 0.7
AP1S3-206ENST00000443700 REREQ9P2R6 1566 aa19.45■□□□□ 0.7
AP1S3-206ENST00000443700 PLEKHF1Q96S99 279 aa19.44■□□□□ 0.7
AP1S3-206ENST00000443700 TSR2Q969E8 191 aaKnown RBP19.44■□□□□ 0.7
AP1S3-206ENST00000443700 A0A1W2PP64 1363 aa19.44■□□□□ 0.7
AP1S3-206ENST00000443700 ATAD2Q6PL18 1390 aa19.44■□□□□ 0.7
AP1S3-206ENST00000443700 ZFYVE9O95405 1425 aa19.44■□□□□ 0.7
AP1S3-206ENST00000443700 SSH1Q8WYL5 1049 aa19.43■□□□□ 0.7
AP1S3-206ENST00000443700 EIF5BO60841 1220 aaKnown RBP19.42■□□□□ 0.7
AP1S3-206ENST00000443700 PTMSP20962 102 aa19.42■□□□□ 0.7
AP1S3-206ENST00000443700 ALDH1L2Q3SY69 923 aa19.42■□□□□ 0.7
AP1S3-206ENST00000443700 SNX21Q969T3 373 aa19.42■□□□□ 0.7
AP1S3-206ENST00000443700 CHMP4BQ9H444 224 aaKnown RBP19.42■□□□□ 0.7
AP1S3-206ENST00000443700 U2SURPO15042 1029 aaKnown RBP19.41■□□□□ 0.7
AP1S3-206ENST00000443700 TRAK2O60296 914 aa19.41■□□□□ 0.7
AP1S3-206ENST00000443700 RBM25P49756 843 aaKnown RBP19.41■□□□□ 0.7
AP1S3-206ENST00000443700 MRE11P49959 708 aa19.41■□□□□ 0.7
AP1S3-206ENST00000443700 TRIM35Q9UPQ4 493 aa19.41■□□□□ 0.7
AP1S3-206ENST00000443700 XRCC6P12956 609 aaKnown RBP eCLIP19.4■□□□□ 0.7
AP1S3-206ENST00000443700 ZNF428Q96B54 188 aa19.4■□□□□ 0.7
AP1S3-206ENST00000443700 CIZ1Q9ULV3 898 aaPredicted RBP19.4■□□□□ 0.7
AP1S3-206ENST00000443700 RRAGDQ9NQL2 400 aaPredicted RBP19.39■□□□□ 0.7
AP1S3-206ENST00000443700 ZBTB40Q9NUA8 1239 aa19.39■□□□□ 0.7
AP1S3-206ENST00000443700 NOB1Q9ULX3 412 aaKnown RBP19.39■□□□□ 0.7
AP1S3-206ENST00000443700 NUCB1Q02818 461 aa19.39■□□□□ 0.69
AP1S3-206ENST00000443700 TMEM57Q8N5G2 664 aa19.39■□□□□ 0.69
AP1S3-206ENST00000443700 SPRYD3Q8NCJ5 442 aa19.39■□□□□ 0.69
AP1S3-206ENST00000443700 ARHGAP31Q2M1Z3 1444 aa19.38■□□□□ 0.69
AP1S3-206ENST00000443700 CABP2Q9NPB3 220 aa19.38■□□□□ 0.69
AP1S3-206ENST00000443700 TERF2IPQ9NYB0 399 aa19.38■□□□□ 0.69
AP1S3-206ENST00000443700 PPIP5K1Q6PFW1 1433 aa19.38■□□□□ 0.69
AP1S3-206ENST00000443700 LRRC7Q96NW7 1537 aa19.37■□□□□ 0.69
AP1S3-206ENST00000443700 GGT6Q6P531 493 aa19.37■□□□□ 0.69
AP1S3-206ENST00000443700 BRPF1P55201 1214 aaPredicted RBP19.36■□□□□ 0.69
AP1S3-206ENST00000443700 ZNF692Q9BU19 519 aaPredicted RBP19.36■□□□□ 0.69
AP1S3-206ENST00000443700 PTPRMP28827 1452 aa19.35■□□□□ 0.69
AP1S3-206ENST00000443700 DDIT3P35638 169 aa19.35■□□□□ 0.69
AP1S3-206ENST00000443700 RIPK4P57078 832 aa19.35■□□□□ 0.69
AP1S3-206ENST00000443700 UBE2Q2Q8WVN8 375 aa19.35■□□□□ 0.69
AP1S3-206ENST00000443700 GBP4Q96PP9 640 aa19.35■□□□□ 0.69
AP1S3-206ENST00000443700 PNPLA6Q8IY17 1366 aa19.35■□□□□ 0.69
AP1S3-206ENST00000443700 DIAPH1O60610 1272 aaKnown RBP19.34■□□□□ 0.69
AP1S3-206ENST00000443700 BMP2KLQ5H9B9 411 aa19.34■□□□□ 0.69
AP1S3-206ENST00000443700 CLCN1P35523 988 aa19.34■□□□□ 0.69
AP1S3-206ENST00000443700 SRPK2P78362 688 aaKnown RBP19.34■□□□□ 0.69
AP1S3-206ENST00000443700 CHD1LQ86WJ1 897 aa19.34■□□□□ 0.69
AP1S3-206ENST00000443700 GZF1Q9H116 711 aaPredicted RBP19.34■□□□□ 0.69
AP1S3-206ENST00000443700 CD163L1Q9NR16 1453 aa19.34■□□□□ 0.69
AP1S3-206ENST00000443700 HSP90AB1P08238 724 aaKnown RBP19.33■□□□□ 0.68
AP1S3-206ENST00000443700 SKOR2Q2VWA4 1001 aaPredicted RBP19.33■□□□□ 0.68
AP1S3-206ENST00000443700 GCC1Q96CN9 775 aa19.33■□□□□ 0.68
AP1S3-206ENST00000443700 PTCH1Q13635 1447 aa19.33■□□□□ 0.68
AP1S3-206ENST00000443700 FAM135BQ49AJ0 1406 aa19.33■□□□□ 0.68
AP1S3-206ENST00000443700 MYO5BQ9ULV0 1848 aa19.33■□□□□ 0.68
AP1S3-206ENST00000443700 DIP2CQ9Y2E4 1556 aa19.32■□□□□ 0.68
AP1S3-206ENST00000443700 GGNBP2Q9H3C7 697 aa19.32■□□□□ 0.68
AP1S3-206ENST00000443700 PIK3R4Q99570 1358 aa19.32■□□□□ 0.68
AP1S3-206ENST00000443700 CALD1Q05682 793 aaKnown RBP19.32■□□□□ 0.68
AP1S3-206ENST00000443700 HDGFL2Q7Z4V5 671 aaPredicted RBP19.31■□□□□ 0.68
AP1S3-206ENST00000443700 GRPEL1Q9HAV7 217 aa19.31■□□□□ 0.68
AP1S3-206ENST00000443700 PREX1Q8TCU6 1659 aa19.31■□□□□ 0.68
AP1S3-206ENST00000443700 FCHSD2O94868 740 aa19.3■□□□□ 0.68
AP1S3-206ENST00000443700 CFAP44Q96MT7 982 aa19.3■□□□□ 0.68
AP1S3-206ENST00000443700 ARXQ96QS3 562 aa19.3■□□□□ 0.68
AP1S3-206ENST00000443700 TMEM131LA2VDJ0 1609 aa19.3■□□□□ 0.68
AP1S3-206ENST00000443700 ARHGAP45Q92619 1136 aa19.29■□□□□ 0.68
AP1S3-206ENST00000443700 LNPKQ9C0E8 428 aa19.29■□□□□ 0.68
AP1S3-206ENST00000443700 FYB1O15117 783 aa19.29■□□□□ 0.68
AP1S3-206ENST00000443700 NEO1Q92859 1461 aa19.29■□□□□ 0.68
AP1S3-206ENST00000443700 RAB3GAP1Q15042 981 aa19.28■□□□□ 0.68
AP1S3-206ENST00000443700 PANK2Q9BZ23 570 aa19.28■□□□□ 0.68
AP1S3-206ENST00000443700 YTHDC2Q9H6S0 1430 aaKnown RBP19.27■□□□□ 0.68
AP1S3-206ENST00000443700 SLC52A1Q9NWF4 448 aa19.27■□□□□ 0.68
AP1S3-206ENST00000443700 TNPO1Q92973 898 aaKnown RBP19.27■□□□□ 0.67
AP1S3-206ENST00000443700 ATP7BP35670 1465 aa19.26■□□□□ 0.67
AP1S3-206ENST00000443700 NPM1P06748 294 aaKnown RBP eCLIP19.25■□□□□ 0.67
AP1S3-206ENST00000443700 SAFB2Q14151 953 aaKnown RBP eCLIP19.25■□□□□ 0.67
AP1S3-206ENST00000443700 HSP90AA1P07900 732 aaKnown RBP19.24■□□□□ 0.67
AP1S3-206ENST00000443700 K7ELQ4 463 aaPredicted RBP19.24■□□□□ 0.67
AP1S3-206ENST00000443700 NUTM2DQ5VT03 806 aaPredicted RBP19.24■□□□□ 0.67
AP1S3-206ENST00000443700 ARHGEF40Q8TER5 1519 aa19.24■□□□□ 0.67
AP1S3-206ENST00000443700 GOLGA6L22H0YM25 854 aa19.23■□□□□ 0.67
AP1S3-206ENST00000443700 DLC1Q96QB1 1528 aa19.22■□□□□ 0.67
AP1S3-206ENST00000443700 KIF24Q5T7B8 1368 aa19.22■□□□□ 0.67
AP1S3-206ENST00000443700 ZBTB7BO15156 539 aaPredicted RBP19.22■□□□□ 0.67
AP1S3-206ENST00000443700 GNAI1P63096 354 aa19.22■□□□□ 0.67
AP1S3-206ENST00000443700 ANKRD45Q5TZF3 282 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms