RNA–Protein interactions for RNA: ENST00000443598.6

HNF4A-205, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-205ENST00000443598 PPIP5K1Q6PFW1 1433 aa30.24■■■□□ 2.43
HNF4A-205ENST00000443598 BCL9LQ86UU0 1499 aa30.24■■■□□ 2.43
HNF4A-205ENST00000443598 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.23■■■□□ 2.43
HNF4A-205ENST00000443598 SBNO2Q9Y2G9 1366 aa30.23■■■□□ 2.43
HNF4A-205ENST00000443598 ATRNO75882 1429 aa30.22■■■□□ 2.43
HNF4A-205ENST00000443598 SLIT2O94813 1529 aa30.22■■■□□ 2.43
HNF4A-205ENST00000443598 PAK3O75914 559 aaPredicted RBP30.22■■■□□ 2.43
HNF4A-205ENST00000443598 CRYBG1Q9Y4K1 1723 aa30.19■■■□□ 2.42
HNF4A-205ENST00000443598 BRD4O60885 1362 aaPredicted RBP30.18■■■□□ 2.42
HNF4A-205ENST00000443598 TIMELESSQ9UNS1 1208 aa30.17■■■□□ 2.42
HNF4A-205ENST00000443598 NWD2Q9ULI1 1742 aa30.17■■■□□ 2.42
HNF4A-205ENST00000443598 UNC5CLQ8IV45 518 aa30.16■■■□□ 2.42
HNF4A-205ENST00000443598 CABP1Q9NZU7 370 aa30.15■■■□□ 2.42
HNF4A-205ENST00000443598 PLEKHG5O94827 1062 aa30.14■■■□□ 2.42
HNF4A-205ENST00000443598 PLCH1Q4KWH8 1693 aa30.14■■■□□ 2.42
HNF4A-205ENST00000443598 RGS12O14924 1447 aa30.13■■■□□ 2.41
HNF4A-205ENST00000443598 ATAD2Q6PL18 1390 aa30.13■■■□□ 2.41
HNF4A-205ENST00000443598 FAM83GA6ND36 823 aa30.1■■■□□ 2.41
HNF4A-205ENST00000443598 COL14A1Q05707 1796 aaKnown RBP30.1■■■□□ 2.41
HNF4A-205ENST00000443598 GJD4Q96KN9 370 aaPredicted RBP30.09■■■□□ 2.41
HNF4A-205ENST00000443598 USP6P35125 1406 aa30.09■■■□□ 2.41
HNF4A-205ENST00000443598 PHRF1Q9P1Y6 1649 aaKnown RBP30.09■■■□□ 2.41
HNF4A-205ENST00000443598 ABTB2Q8N961 1025 aa30.07■■■□□ 2.4
HNF4A-205ENST00000443598 ZNF692Q9BU19 519 aaPredicted RBP30.06■■■□□ 2.4
HNF4A-205ENST00000443598 AKAP12Q02952 1782 aa30.05■■■□□ 2.4
HNF4A-205ENST00000443598 SLC24A1O60721 1099 aa30.04■■■□□ 2.4
HNF4A-205ENST00000443598 VPS72Q15906 364 aa30.04■■■□□ 2.4
HNF4A-205ENST00000443598 SSH2Q76I76 1423 aa30.04■■■□□ 2.4
HNF4A-205ENST00000443598 PUS7Q96PZ0 661 aaKnown RBP30.04■■■□□ 2.4
HNF4A-205ENST00000443598 NRAPQ86VF7 1730 aa30.03■■■□□ 2.4
HNF4A-205ENST00000443598 NUTM2GQ5VZR2 741 aa30.03■■■□□ 2.4
HNF4A-205ENST00000443598 NLRP13Q86W25 1043 aa30.03■■■□□ 2.4
HNF4A-205ENST00000443598 USP19O94966 1318 aa30.03■■■□□ 2.4
HNF4A-205ENST00000443598 GLI3P10071 1580 aa30.02■■■□□ 2.4
HNF4A-205ENST00000443598 PRDM11Q9NQV5 511 aa30.01■■■□□ 2.39
HNF4A-205ENST00000443598 CPSF1Q10570 1443 aaKnown RBP30■■■□□ 2.39
HNF4A-205ENST00000443598 ST20-MTHFSA0A0A6YYL1 179 aa30■■■□□ 2.39
HNF4A-205ENST00000443598 TESK2Q96S53 571 aa30■■■□□ 2.39
HNF4A-205ENST00000443598 BTG4Q9NY30 223 aa30■■■□□ 2.39
HNF4A-205ENST00000443598 NRKQ7Z2Y5 1582 aa29.99■■■□□ 2.39
HNF4A-205ENST00000443598 KIAA0232Q92628 1395 aa29.98■■■□□ 2.39
HNF4A-205ENST00000443598 UPF1Q92900 1129 aaKnown RBP eCLIP29.97■■■□□ 2.39
HNF4A-205ENST00000443598 CCER1Q8TC90 406 aaPredicted RBP29.96■■■□□ 2.39
HNF4A-205ENST00000443598 MON2Q7Z3U7 1717 aa29.95■■■□□ 2.39
HNF4A-205ENST00000443598 CPDO75976 1380 aa29.95■■■□□ 2.39
HNF4A-205ENST00000443598 USP47Q96K76 1375 aa29.95■■■□□ 2.38
HNF4A-205ENST00000443598 PIK3C2AO00443 1686 aa29.95■■■□□ 2.38
HNF4A-205ENST00000443598 TTC21BQ7Z4L5 1316 aa29.94■■■□□ 2.38
HNF4A-205ENST00000443598 TTC21AQ8NDW8 1320 aa29.94■■■□□ 2.38
HNF4A-205ENST00000443598 ZC3H6P61129 1189 aaKnown RBP29.94■■■□□ 2.38
HNF4A-205ENST00000443598 KTN1Q86UP2 1357 aaKnown RBP29.94■■■□□ 2.38
HNF4A-205ENST00000443598 GCP02774 474 aa29.93■■■□□ 2.38
HNF4A-205ENST00000443598 NLRP6P59044 892 aa29.93■■■□□ 2.38
HNF4A-205ENST00000443598 ONECUT3O60422 494 aaPredicted RBP29.93■■■□□ 2.38
HNF4A-205ENST00000443598 CCDC9Q9Y3X0 531 aaKnown RBP29.93■■■□□ 2.38
HNF4A-205ENST00000443598 SLIT3O75094 1523 aa29.92■■■□□ 2.38
HNF4A-205ENST00000443598 CD163L1Q9NR16 1453 aa29.9■■■□□ 2.38
HNF4A-205ENST00000443598 CHRNA2Q15822 529 aa29.89■■■□□ 2.38
HNF4A-205ENST00000443598 NINLQ9Y2I6 1382 aa29.89■■■□□ 2.38
HNF4A-205ENST00000443598 TMC1Q8TDI8 760 aa29.89■■■□□ 2.37
HNF4A-205ENST00000443598 SLC12A5Q9H2X9 1139 aa29.88■■■□□ 2.37
HNF4A-205ENST00000443598 HDGFL2Q7Z4V5 671 aaPredicted RBP29.87■■■□□ 2.37
HNF4A-205ENST00000443598 LMO7Q8WWI1 1683 aa29.87■■■□□ 2.37
HNF4A-205ENST00000443598 TERF2IPQ9NYB0 399 aa29.86■■■□□ 2.37
HNF4A-205ENST00000443598 SPATA31A5Q5VU36 1347 aa29.86■■■□□ 2.37
HNF4A-205ENST00000443598 SPATA31A7Q8IWB4 1347 aa29.86■■■□□ 2.37
HNF4A-205ENST00000443598 BRWD3Q6RI45 1802 aa29.86■■■□□ 2.37
HNF4A-205ENST00000443598 SEPT12Q8IYM1 358 aa29.85■■■□□ 2.37
HNF4A-205ENST00000443598 TMF1P82094 1093 aa29.84■■■□□ 2.37
HNF4A-205ENST00000443598 CAMTA1Q9Y6Y1 1673 aa29.83■■■□□ 2.37
HNF4A-205ENST00000443598 KCNH5Q8NCM2 988 aa29.82■■■□□ 2.36
HNF4A-205ENST00000443598 USP54Q70EL1 1684 aa29.82■■■□□ 2.36
HNF4A-205ENST00000443598 EDC4Q6P2E9 1401 aaKnown RBP29.82■■■□□ 2.36
HNF4A-205ENST00000443598 USP31Q70CQ4 1352 aa29.81■■■□□ 2.36
HNF4A-205ENST00000443598 A0A1W2PP64 1363 aa29.8■■■□□ 2.36
HNF4A-205ENST00000443598 AATKQ6ZMQ8 1374 aa29.79■■■□□ 2.36
HNF4A-205ENST00000443598 SPATA31A1Q5TZJ5 1347 aa29.79■■■□□ 2.36
HNF4A-205ENST00000443598 EVA1CP58658 441 aa29.79■■■□□ 2.36
HNF4A-205ENST00000443598 STRN4Q9NRL3 753 aa29.79■■■□□ 2.36
HNF4A-205ENST00000443598 FAM98CQ17RN3 349 aaKnown RBP29.78■■■□□ 2.36
HNF4A-205ENST00000443598 CDCA8Q53HL2 280 aa29.78■■■□□ 2.36
HNF4A-205ENST00000443598 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.78■■■□□ 2.36
HNF4A-205ENST00000443598 EP400Q96L91 3159 aa29.76■■■□□ 2.35
HNF4A-205ENST00000443598 COL18A1P39060 1754 aa29.76■■■□□ 2.35
HNF4A-205ENST00000443598 THSD7AQ9UPZ6 1657 aa29.75■■■□□ 2.35
HNF4A-205ENST00000443598 CCDC125Q86Z20 511 aa29.75■■■□□ 2.35
HNF4A-205ENST00000443598 COL5A2P05997 1499 aaPredicted RBP29.75■■■□□ 2.35
HNF4A-205ENST00000443598 KRT27Q7Z3Y8 459 aa29.74■■■□□ 2.35
HNF4A-205ENST00000443598 NFAT5O94916 1531 aa29.74■■■□□ 2.35
HNF4A-205ENST00000443598 ARHGEF25Q86VW2 580 aa29.74■■■□□ 2.35
HNF4A-205ENST00000443598 A0A0G2JS52 829 aa29.72■■■□□ 2.35
HNF4A-205ENST00000443598 MYT1Q01538 1121 aa29.72■■■□□ 2.35
HNF4A-205ENST00000443598 NME9Q86XW9 330 aa29.72■■■□□ 2.35
HNF4A-205ENST00000443598 ANKRD36BQ8N2N9 1353 aa29.72■■■□□ 2.35
HNF4A-205ENST00000443598 LARP1Q6PKG0 1096 aaKnown RBP29.71■■■□□ 2.35
HNF4A-205ENST00000443598 BARGINQ6ZT62 677 aa29.71■■■□□ 2.35
HNF4A-205ENST00000443598 ABCC6O95255 1503 aa29.7■■■□□ 2.35
HNF4A-205ENST00000443598 ZBTB7CA1YPR0 619 aa29.7■■■□□ 2.34
HNF4A-205ENST00000443598 ZRANB1Q9UGI0 708 aa29.7■■■□□ 2.34
HNF4A-205ENST00000443598 THRAP3Q9Y2W1 955 aaKnown RBP29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms