RNA–Protein interactions for RNA: ENST00000442489.1

CDKN1B-203, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 5

Gene CDKN1B, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-203ENST00000442489 CDK19Q9BWU1 502 aa23.69■■□□□ 1.38
CDKN1B-203ENST00000442489 CCDC9Q9Y3X0 531 aaKnown RBP23.69■■□□□ 1.38
CDKN1B-203ENST00000442489 NWD2Q9ULI1 1742 aa23.69■■□□□ 1.38
CDKN1B-203ENST00000442489 GLI3P10071 1580 aa23.69■■□□□ 1.38
CDKN1B-203ENST00000442489 ALS2Q96Q42 1657 aa23.68■■□□□ 1.38
CDKN1B-203ENST00000442489 NUDT16Q96DE0 195 aaKnown RBP23.68■■□□□ 1.38
CDKN1B-203ENST00000442489 PAK3O75914 559 aaPredicted RBP23.67■■□□□ 1.38
CDKN1B-203ENST00000442489 TIMELESSQ9UNS1 1208 aa23.67■■□□□ 1.38
CDKN1B-203ENST00000442489 SBNO2Q9Y2G9 1366 aa23.66■■□□□ 1.38
CDKN1B-203ENST00000442489 CCDC61Q9Y6R9 512 aa23.66■■□□□ 1.38
CDKN1B-203ENST00000442489 POLR3AO14802 1390 aaPredicted RBP23.65■■□□□ 1.38
CDKN1B-203ENST00000442489 PLEKHG3A1L390 1219 aa23.63■■□□□ 1.37
CDKN1B-203ENST00000442489 VPS72Q15906 364 aa23.63■■□□□ 1.37
CDKN1B-203ENST00000442489 BRWD3Q6RI45 1802 aa23.62■■□□□ 1.37
CDKN1B-203ENST00000442489 FAM83GA6ND36 823 aa23.62■■□□□ 1.37
CDKN1B-203ENST00000442489 CARD11Q9BXL7 1154 aa23.61■■□□□ 1.37
CDKN1B-203ENST00000442489 COL14A1Q05707 1796 aaKnown RBP23.6■■□□□ 1.37
CDKN1B-203ENST00000442489 EVC2Q86UK5 1308 aa23.59■■□□□ 1.37
CDKN1B-203ENST00000442489 SEPT12Q8IYM1 358 aa23.59■■□□□ 1.37
CDKN1B-203ENST00000442489 A0A0G2JS52 829 aa23.58■■□□□ 1.37
CDKN1B-203ENST00000442489 SRPK2P78362 688 aaKnown RBP23.58■■□□□ 1.37
CDKN1B-203ENST00000442489 MYT1Q01538 1121 aa23.58■■□□□ 1.37
CDKN1B-203ENST00000442489 CCDC125Q86Z20 511 aa23.58■■□□□ 1.37
CDKN1B-203ENST00000442489 BTG4Q9NY30 223 aa23.58■■□□□ 1.37
CDKN1B-203ENST00000442489 NRAPQ86VF7 1730 aa23.58■■□□□ 1.37
CDKN1B-203ENST00000442489 CRYBG1Q9Y4K1 1723 aa23.58■■□□□ 1.37
CDKN1B-203ENST00000442489 PPIP5K1Q6PFW1 1433 aa23.58■■□□□ 1.36
CDKN1B-203ENST00000442489 BRD4O60885 1362 aaPredicted RBP23.56■■□□□ 1.36
CDKN1B-203ENST00000442489 ACEP12821 1306 aa23.56■■□□□ 1.36
CDKN1B-203ENST00000442489 CABP2Q9NPB3 220 aa23.55■■□□□ 1.36
CDKN1B-203ENST00000442489 PRDM11Q9NQV5 511 aa23.54■■□□□ 1.36
CDKN1B-203ENST00000442489 PHRF1Q9P1Y6 1649 aaKnown RBP23.52■■□□□ 1.36
CDKN1B-203ENST00000442489 NUTM2GQ5VZR2 741 aa23.52■■□□□ 1.36
CDKN1B-203ENST00000442489 FAM98CQ17RN3 349 aaKnown RBP23.51■■□□□ 1.35
CDKN1B-203ENST00000442489 KRT27Q7Z3Y8 459 aa23.51■■□□□ 1.35
CDKN1B-203ENST00000442489 BLMP54132 1417 aaPredicted RBP23.5■■□□□ 1.35
CDKN1B-203ENST00000442489 ONECUT3O60422 494 aaPredicted RBP23.5■■□□□ 1.35
CDKN1B-203ENST00000442489 SF3B2Q13435 895 aaKnown RBP23.5■■□□□ 1.35
CDKN1B-203ENST00000442489 SLC24A1O60721 1099 aa23.49■■□□□ 1.35
CDKN1B-203ENST00000442489 PUS7Q96PZ0 661 aaKnown RBP23.49■■□□□ 1.35
CDKN1B-203ENST00000442489 ZRANB1Q9UGI0 708 aa23.49■■□□□ 1.35
CDKN1B-203ENST00000442489 AKAP12Q02952 1782 aa23.49■■□□□ 1.35
CDKN1B-203ENST00000442489 KIAA0232Q92628 1395 aa23.48■■□□□ 1.35
CDKN1B-203ENST00000442489 ZC3H6P61129 1189 aaKnown RBP23.47■■□□□ 1.35
CDKN1B-203ENST00000442489 CHRNA2Q15822 529 aa23.47■■□□□ 1.35
CDKN1B-203ENST00000442489 ABTB2Q8N961 1025 aa23.47■■□□□ 1.35
CDKN1B-203ENST00000442489 CABP1Q9NZU7 370 aa23.47■■□□□ 1.35
CDKN1B-203ENST00000442489 USP6P35125 1406 aa23.47■■□□□ 1.35
CDKN1B-203ENST00000442489 SSH2Q76I76 1423 aa23.46■■□□□ 1.35
CDKN1B-203ENST00000442489 SPATA31A5Q5VU36 1347 aa23.45■■□□□ 1.34
CDKN1B-203ENST00000442489 SPATA31A7Q8IWB4 1347 aa23.45■■□□□ 1.34
CDKN1B-203ENST00000442489 CPSF1Q10570 1443 aaKnown RBP23.44■■□□□ 1.34
CDKN1B-203ENST00000442489 CCER1Q8TC90 406 aaPredicted RBP23.44■■□□□ 1.34
CDKN1B-203ENST00000442489 TESK2Q96S53 571 aa23.44■■□□□ 1.34
CDKN1B-203ENST00000442489 ZNF692Q9BU19 519 aaPredicted RBP23.44■■□□□ 1.34
CDKN1B-203ENST00000442489 STRN4Q9NRL3 753 aa23.44■■□□□ 1.34
CDKN1B-203ENST00000442489 EP400Q96L91 3159 aa23.43■■□□□ 1.34
CDKN1B-203ENST00000442489 DEFB132Q7Z7B7 95 aa23.42■■□□□ 1.34
CDKN1B-203ENST00000442489 NRKQ7Z2Y5 1582 aa23.42■■□□□ 1.34
CDKN1B-203ENST00000442489 MON2Q7Z3U7 1717 aa23.42■■□□□ 1.34
CDKN1B-203ENST00000442489 ST20-MTHFSA0A0A6YYL1 179 aa23.41■■□□□ 1.34
CDKN1B-203ENST00000442489 USP47Q96K76 1375 aa23.4■■□□□ 1.34
CDKN1B-203ENST00000442489 USP19O94966 1318 aa23.4■■□□□ 1.34
CDKN1B-203ENST00000442489 EVA1CP58658 441 aa23.4■■□□□ 1.34
CDKN1B-203ENST00000442489 NLRP13Q86W25 1043 aa23.4■■□□□ 1.34
CDKN1B-203ENST00000442489 PIK3C2AO00443 1686 aa23.38■■□□□ 1.33
CDKN1B-203ENST00000442489 THSD7AQ9UPZ6 1657 aa23.38■■□□□ 1.33
CDKN1B-203ENST00000442489 SPATA31A1Q5TZJ5 1347 aa23.37■■□□□ 1.33
CDKN1B-203ENST00000442489 NINLQ9Y2I6 1382 aa23.37■■□□□ 1.33
CDKN1B-203ENST00000442489 CD163L1Q9NR16 1453 aa23.36■■□□□ 1.33
CDKN1B-203ENST00000442489 FAM182BQ5T319 152 aa23.36■■□□□ 1.33
CDKN1B-203ENST00000442489 USP35Q9P2H5 1018 aa23.36■■□□□ 1.33
CDKN1B-203ENST00000442489 TTC21AQ8NDW8 1320 aa23.35■■□□□ 1.33
CDKN1B-203ENST00000442489 SLIT3O75094 1523 aa23.35■■□□□ 1.33
CDKN1B-203ENST00000442489 BAG6P46379 1132 aa23.35■■□□□ 1.33
CDKN1B-203ENST00000442489 CPDO75976 1380 aa23.35■■□□□ 1.33
CDKN1B-203ENST00000442489 USP54Q70EL1 1684 aa23.35■■□□□ 1.33
CDKN1B-203ENST00000442489 RGPD1P0DJD0 1748 aa23.34■■□□□ 1.33
CDKN1B-203ENST00000442489 ZBTB7CA1YPR0 619 aa23.34■■□□□ 1.33
CDKN1B-203ENST00000442489 GCP02774 474 aa23.34■■□□□ 1.33
CDKN1B-203ENST00000442489 CAMTA1Q9Y6Y1 1673 aa23.33■■□□□ 1.33
CDKN1B-203ENST00000442489 NLRP6P59044 892 aa23.33■■□□□ 1.33
CDKN1B-203ENST00000442489 TTC21BQ7Z4L5 1316 aa23.33■■□□□ 1.32
CDKN1B-203ENST00000442489 LMO7Q8WWI1 1683 aa23.32■■□□□ 1.32
CDKN1B-203ENST00000442489 KTN1Q86UP2 1357 aaKnown RBP23.32■■□□□ 1.32
CDKN1B-203ENST00000442489 TMF1P82094 1093 aa23.3■■□□□ 1.32
CDKN1B-203ENST00000442489 LARP1Q6PKG0 1096 aaKnown RBP23.3■■□□□ 1.32
CDKN1B-203ENST00000442489 EDC4Q6P2E9 1401 aaKnown RBP23.28■■□□□ 1.32
CDKN1B-203ENST00000442489 BARGINQ6ZT62 677 aa23.27■■□□□ 1.32
CDKN1B-203ENST00000442489 HDGFL2Q7Z4V5 671 aaPredicted RBP23.27■■□□□ 1.32
CDKN1B-203ENST00000442489 SLC12A5Q9H2X9 1139 aa23.27■■□□□ 1.32
CDKN1B-203ENST00000442489 TERF2IPQ9NYB0 399 aa23.27■■□□□ 1.32
CDKN1B-203ENST00000442489 USP31Q70CQ4 1352 aa23.27■■□□□ 1.31
CDKN1B-203ENST00000442489 PDE3BQ13370 1112 aa23.26■■□□□ 1.31
CDKN1B-203ENST00000442489 CDCA8Q53HL2 280 aa23.26■■□□□ 1.31
CDKN1B-203ENST00000442489 TCP11L2Q8N4U5 519 aa23.26■■□□□ 1.31
CDKN1B-203ENST00000442489 A0A1W2PP64 1363 aa23.26■■□□□ 1.31
CDKN1B-203ENST00000442489 TNS1Q9HBL0 1735 aaKnown RBP23.25■■□□□ 1.31
CDKN1B-203ENST00000442489 COL5A2P05997 1499 aaPredicted RBP23.25■■□□□ 1.31
CDKN1B-203ENST00000442489 EN1Q05925 392 aaPredicted RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms