RNA–Protein interactions for RNA: ENST00000442309.5

GCFC2-204, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5

Gene GCFC2, Length 642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-204ENST00000442309 NWD2Q9ULI1 1742 aa29.93■■■□□ 2.38
GCFC2-204ENST00000442309 ATAD2Q6PL18 1390 aa29.93■■■□□ 2.38
GCFC2-204ENST00000442309 FAM83GA6ND36 823 aa29.92■■■□□ 2.38
GCFC2-204ENST00000442309 ACEP12821 1306 aa29.92■■■□□ 2.38
GCFC2-204ENST00000442309 ROCK2O75116 1388 aaKnown RBP29.91■■■□□ 2.38
GCFC2-204ENST00000442309 CABP2Q9NPB3 220 aa29.91■■■□□ 2.38
GCFC2-204ENST00000442309 POLR3AO14802 1390 aaPredicted RBP29.9■■■□□ 2.38
GCFC2-204ENST00000442309 CCDC9Q9Y3X0 531 aaKnown RBP29.9■■■□□ 2.38
GCFC2-204ENST00000442309 CRYBG1Q9Y4K1 1723 aa29.9■■■□□ 2.38
GCFC2-204ENST00000442309 NBPF8Q3BBV2 869 aa29.89■■■□□ 2.38
GCFC2-204ENST00000442309 PLEKHG3A1L390 1219 aa29.88■■■□□ 2.37
GCFC2-204ENST00000442309 VPS72Q15906 364 aa29.88■■■□□ 2.37
GCFC2-204ENST00000442309 PPIP5K1Q6PFW1 1433 aa29.88■■■□□ 2.37
GCFC2-204ENST00000442309 COL14A1Q05707 1796 aaKnown RBP29.86■■■□□ 2.37
GCFC2-204ENST00000442309 TRIM26Q12899 539 aaPredicted RBP29.86■■■□□ 2.37
GCFC2-204ENST00000442309 NUTM2GQ5VZR2 741 aa29.86■■■□□ 2.37
GCFC2-204ENST00000442309 BTG4Q9NY30 223 aa29.85■■■□□ 2.37
GCFC2-204ENST00000442309 NRAPQ86VF7 1730 aa29.85■■■□□ 2.37
GCFC2-204ENST00000442309 PHRF1Q9P1Y6 1649 aaKnown RBP29.82■■■□□ 2.36
GCFC2-204ENST00000442309 PRDM11Q9NQV5 511 aa29.81■■■□□ 2.36
GCFC2-204ENST00000442309 EP400Q96L91 3159 aa29.81■■■□□ 2.36
GCFC2-204ENST00000442309 BRWD3Q6RI45 1802 aa29.8■■■□□ 2.36
GCFC2-204ENST00000442309 TONSLQ96HA7 1378 aa29.79■■■□□ 2.36
GCFC2-204ENST00000442309 EVC2Q86UK5 1308 aa29.79■■■□□ 2.36
GCFC2-204ENST00000442309 SEPT12Q8IYM1 358 aa29.79■■■□□ 2.36
GCFC2-204ENST00000442309 ABTB2Q8N961 1025 aa29.78■■■□□ 2.36
GCFC2-204ENST00000442309 KIAA0232Q92628 1395 aa29.77■■■□□ 2.36
GCFC2-204ENST00000442309 CABP1Q9NZU7 370 aa29.77■■■□□ 2.36
GCFC2-204ENST00000442309 ZC3H6P61129 1189 aaKnown RBP29.76■■■□□ 2.35
GCFC2-204ENST00000442309 A0A0G2JS52 829 aa29.75■■■□□ 2.35
GCFC2-204ENST00000442309 MYT1Q01538 1121 aa29.75■■■□□ 2.35
GCFC2-204ENST00000442309 CHRNA2Q15822 529 aa29.75■■■□□ 2.35
GCFC2-204ENST00000442309 FAM98CQ17RN3 349 aaKnown RBP29.72■■■□□ 2.35
GCFC2-204ENST00000442309 NRKQ7Z2Y5 1582 aa29.72■■■□□ 2.35
GCFC2-204ENST00000442309 ONECUT3O60422 494 aaPredicted RBP29.71■■■□□ 2.35
GCFC2-204ENST00000442309 CARD11Q9BXL7 1154 aa29.71■■■□□ 2.35
GCFC2-204ENST00000442309 USP6P35125 1406 aa29.7■■■□□ 2.34
GCFC2-204ENST00000442309 NLRP13Q86W25 1043 aa29.68■■■□□ 2.34
GCFC2-204ENST00000442309 STRN4Q9NRL3 753 aa29.68■■■□□ 2.34
GCFC2-204ENST00000442309 USP19O94966 1318 aa29.68■■■□□ 2.34
GCFC2-204ENST00000442309 SPATA31A5Q5VU36 1347 aa29.68■■■□□ 2.34
GCFC2-204ENST00000442309 SPATA31A7Q8IWB4 1347 aa29.68■■■□□ 2.34
GCFC2-204ENST00000442309 KRT27Q7Z3Y8 459 aa29.67■■■□□ 2.34
GCFC2-204ENST00000442309 BRD4O60885 1362 aaPredicted RBP29.66■■■□□ 2.34
GCFC2-204ENST00000442309 CCDC125Q86Z20 511 aa29.66■■■□□ 2.34
GCFC2-204ENST00000442309 GCP02774 474 aa29.62■■■□□ 2.33
GCFC2-204ENST00000442309 NLRP6P59044 892 aa29.62■■■□□ 2.33
GCFC2-204ENST00000442309 BLMP54132 1417 aaPredicted RBP29.62■■■□□ 2.33
GCFC2-204ENST00000442309 AKAP12Q02952 1782 aa29.61■■■□□ 2.33
GCFC2-204ENST00000442309 CPDO75976 1380 aa29.61■■■□□ 2.33
GCFC2-204ENST00000442309 SSH2Q76I76 1423 aa29.61■■■□□ 2.33
GCFC2-204ENST00000442309 PIK3C2AO00443 1686 aa29.6■■■□□ 2.33
GCFC2-204ENST00000442309 EVA1CP58658 441 aa29.6■■■□□ 2.33
GCFC2-204ENST00000442309 SBNO2Q9Y2G9 1366 aa29.6■■■□□ 2.33
GCFC2-204ENST00000442309 ZBTB7CA1YPR0 619 aa29.59■■■□□ 2.33
GCFC2-204ENST00000442309 SPATA31A1Q5TZJ5 1347 aa29.59■■■□□ 2.33
GCFC2-204ENST00000442309 CAMTA1Q9Y6Y1 1673 aa29.59■■■□□ 2.33
GCFC2-204ENST00000442309 LMO7Q8WWI1 1683 aa29.58■■■□□ 2.33
GCFC2-204ENST00000442309 USP35Q9P2H5 1018 aa29.58■■■□□ 2.33
GCFC2-204ENST00000442309 THSD7AQ9UPZ6 1657 aa29.57■■■□□ 2.32
GCFC2-204ENST00000442309 ZNF692Q9BU19 519 aaPredicted RBP29.57■■■□□ 2.32
GCFC2-204ENST00000442309 TTC21BQ7Z4L5 1316 aa29.56■■■□□ 2.32
GCFC2-204ENST00000442309 SLIT3O75094 1523 aa29.55■■■□□ 2.32
GCFC2-204ENST00000442309 SF3B2Q13435 895 aaKnown RBP29.55■■■□□ 2.32
GCFC2-204ENST00000442309 LARP1Q6PKG0 1096 aaKnown RBP29.54■■■□□ 2.32
GCFC2-204ENST00000442309 KTN1Q86UP2 1357 aaKnown RBP29.53■■■□□ 2.32
GCFC2-204ENST00000442309 FAM182BQ5T319 152 aa29.53■■■□□ 2.32
GCFC2-204ENST00000442309 DEFB132Q7Z7B7 95 aa29.53■■■□□ 2.32
GCFC2-204ENST00000442309 CPSF1Q10570 1443 aaKnown RBP29.53■■■□□ 2.32
GCFC2-204ENST00000442309 TMC1Q8TDI8 760 aa29.5■■■□□ 2.31
GCFC2-204ENST00000442309 MON2Q7Z3U7 1717 aa29.5■■■□□ 2.31
GCFC2-204ENST00000442309 COL5A2P05997 1499 aaPredicted RBP29.49■■■□□ 2.31
GCFC2-204ENST00000442309 TTC21AQ8NDW8 1320 aa29.49■■■□□ 2.31
GCFC2-204ENST00000442309 SOX12O15370 315 aa29.48■■■□□ 2.31
GCFC2-204ENST00000442309 ZRANB1Q9UGI0 708 aa29.48■■■□□ 2.31
GCFC2-204ENST00000442309 AATKQ6ZMQ8 1374 aa29.45■■■□□ 2.31
GCFC2-204ENST00000442309 BARGINQ6ZT62 677 aa29.45■■■□□ 2.31
GCFC2-204ENST00000442309 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.45■■■□□ 2.31
GCFC2-204ENST00000442309 TCP11L2Q8N4U5 519 aa29.45■■■□□ 2.31
GCFC2-204ENST00000442309 CD163L1Q9NR16 1453 aa29.44■■■□□ 2.3
GCFC2-204ENST00000442309 ST20-MTHFSA0A0A6YYL1 179 aa29.44■■■□□ 2.3
GCFC2-204ENST00000442309 SLC12A5Q9H2X9 1139 aa29.44■■■□□ 2.3
GCFC2-204ENST00000442309 KCNH5Q8NCM2 988 aa29.43■■■□□ 2.3
GCFC2-204ENST00000442309 COL18A1P39060 1754 aa29.42■■■□□ 2.3
GCFC2-204ENST00000442309 HDGFL2Q7Z4V5 671 aaPredicted RBP29.42■■■□□ 2.3
GCFC2-204ENST00000442309 RGPD1P0DJD0 1748 aa29.42■■■□□ 2.3
GCFC2-204ENST00000442309 BAG6P46379 1132 aa29.41■■■□□ 2.3
GCFC2-204ENST00000442309 TESK2Q96S53 571 aa29.41■■■□□ 2.3
GCFC2-204ENST00000442309 PCGF6Q9BYE7 350 aa29.41■■■□□ 2.3
GCFC2-204ENST00000442309 CRB1P82279 1406 aa29.4■■■□□ 2.3
GCFC2-204ENST00000442309 ARHGEF25Q86VW2 580 aa29.4■■■□□ 2.3
GCFC2-204ENST00000442309 AXIN2Q9Y2T1 843 aa29.39■■■□□ 2.3
GCFC2-204ENST00000442309 THRAP3Q9Y2W1 955 aaKnown RBP29.39■■■□□ 2.3
GCFC2-204ENST00000442309 PDE3BQ13370 1112 aa29.38■■■□□ 2.29
GCFC2-204ENST00000442309 NME9Q86XW9 330 aa29.38■■■□□ 2.29
GCFC2-204ENST00000442309 NFAT5O94916 1531 aa29.38■■■□□ 2.29
GCFC2-204ENST00000442309 RGPD5Q99666 1765 aa29.37■■■□□ 2.29
GCFC2-204ENST00000442309 TOM1L2Q6ZVM7 507 aa29.37■■■□□ 2.29
GCFC2-204ENST00000442309 A0A1W2PP64 1363 aa29.37■■■□□ 2.29
GCFC2-204ENST00000442309 FAM196AQ6ZSG2 479 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms