RNA–Protein interactions for RNA: ENST00000442217.5

CCDC115-203, Transcript of coiled-coil domain containing 115, humanhuman

TSL 2

Gene CCDC115, Length 1,847 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-203ENST00000442217 ESCO1Q5FWF5 840 aa25.36■■□□□ 1.65
CCDC115-203ENST00000442217 PNISRQ8TF01 805 aaKnown RBP25.35■■□□□ 1.65
CCDC115-203ENST00000442217 TTC21BQ7Z4L5 1316 aa25.35■■□□□ 1.65
CCDC115-203ENST00000442217 ORAI2Q96SN7 254 aa25.35■■□□□ 1.65
CCDC115-203ENST00000442217 SSH2Q76I76 1423 aa25.34■■□□□ 1.65
CCDC115-203ENST00000442217 ATF3P18847 181 aa25.33■■□□□ 1.65
CCDC115-203ENST00000442217 C1orf167Q5SNV9 1468 aa25.33■■□□□ 1.65
CCDC115-203ENST00000442217 MSH6P52701 1360 aa25.32■■□□□ 1.64
CCDC115-203ENST00000442217 MST1RQ04912 1400 aa25.32■■□□□ 1.64
CCDC115-203ENST00000442217 DCCP43146 1447 aa25.32■■□□□ 1.64
CCDC115-203ENST00000442217 FBLN1P23142 703 aa25.28■■□□□ 1.64
CCDC115-203ENST00000442217 PIK3C2AO00443 1686 aa25.27■■□□□ 1.64
CCDC115-203ENST00000442217 MTHFSP49914 203 aa25.26■■□□□ 1.63
CCDC115-203ENST00000442217 CADPS2Q86UW7 1296 aa25.26■■□□□ 1.63
CCDC115-203ENST00000442217 COG3Q96JB2 828 aa25.26■■□□□ 1.63
CCDC115-203ENST00000442217 KIF1AQ12756 1690 aa25.25■■□□□ 1.63
CCDC115-203ENST00000442217 TTC21AQ8NDW8 1320 aa25.24■■□□□ 1.63
CCDC115-203ENST00000442217 FOXO3O43524 673 aa25.24■■□□□ 1.63
CCDC115-203ENST00000442217 OVOS2A0A0J9YW53 1432 aa25.23■■□□□ 1.63
CCDC115-203ENST00000442217 OVOS2Q6IE36 1432 aa25.23■■□□□ 1.63
CCDC115-203ENST00000442217 HNRNPUQ00839 825 aaKnown RBP eCLIP25.23■■□□□ 1.63
CCDC115-203ENST00000442217 XPCQ01831 940 aaPredicted RBP25.23■■□□□ 1.63
CCDC115-203ENST00000442217 PAK3O75914 559 aaPredicted RBP25.23■■□□□ 1.63
CCDC115-203ENST00000442217 PSME1Q06323 249 aa25.23■■□□□ 1.63
CCDC115-203ENST00000442217 MAP2P11137 1827 aaKnown RBP25.22■■□□□ 1.63
CCDC115-203ENST00000442217 SENP3-EIF4A1A0A087X0R7 540 aa25.21■■□□□ 1.63
CCDC115-203ENST00000442217 SHPRHQ149N8 1683 aa25.2■■□□□ 1.62
CCDC115-203ENST00000442217 NUTM2GQ5VZR2 741 aa25.2■■□□□ 1.62
CCDC115-203ENST00000442217 MARF1Q9Y4F3 1742 aaKnown RBP25.2■■□□□ 1.62
CCDC115-203ENST00000442217 LTBP4Q8N2S1 1624 aa25.19■■□□□ 1.62
CCDC115-203ENST00000442217 AEBP2Q6ZN18 517 aaPredicted RBP25.19■■□□□ 1.62
CCDC115-203ENST00000442217 DDX17Q92841 729 aaKnown RBP25.19■■□□□ 1.62
CCDC115-203ENST00000442217 SCAF1Q9H7N4 1312 aaKnown RBP25.18■■□□□ 1.62
CCDC115-203ENST00000442217 CENPBP07199 599 aaPredicted RBP25.17■■□□□ 1.62
CCDC115-203ENST00000442217 POLKQ9UBT6 870 aa25.17■■□□□ 1.62
CCDC115-203ENST00000442217 WDR43Q15061 677 aaKnown RBP eCLIP25.16■■□□□ 1.62
CCDC115-203ENST00000442217 ABTB2Q8N961 1025 aa25.16■■□□□ 1.62
CCDC115-203ENST00000442217 ADAMTS8Q9UP79 889 aa25.16■■□□□ 1.62
CCDC115-203ENST00000442217 TRPM3Q9HCF6 1732 aaPredicted RBP25.16■■□□□ 1.62
CCDC115-203ENST00000442217 USP31Q70CQ4 1352 aa25.16■■□□□ 1.62
CCDC115-203ENST00000442217 SOX12O15370 315 aa25.16■■□□□ 1.62
CCDC115-203ENST00000442217 NLRP6P59044 892 aa25.16■■□□□ 1.62
CCDC115-203ENST00000442217 RRS1Q15050 365 aaKnown RBP25.15■■□□□ 1.62
CCDC115-203ENST00000442217 CFAP53Q96M91 514 aa25.15■■□□□ 1.62
CCDC115-203ENST00000442217 EMILIN1Q9Y6C2 1016 aa25.15■■□□□ 1.62
CCDC115-203ENST00000442217 PPM1GO15355 546 aaPredicted RBP25.14■■□□□ 1.62
CCDC115-203ENST00000442217 KRT28Q7Z3Y7 464 aa25.14■■□□□ 1.62
CCDC115-203ENST00000442217 AATKQ6ZMQ8 1374 aa25.14■■□□□ 1.62
CCDC115-203ENST00000442217 COL3A1P02461 1466 aaPredicted RBP25.14■■□□□ 1.62
CCDC115-203ENST00000442217 USP54Q70EL1 1684 aa25.14■■□□□ 1.61
CCDC115-203ENST00000442217 SLAIN2Q9P270 581 aa25.13■■□□□ 1.61
CCDC115-203ENST00000442217 BRINP3Q76B58 766 aa25.12■■□□□ 1.61
CCDC115-203ENST00000442217 BLMP54132 1417 aaPredicted RBP25.11■■□□□ 1.61
CCDC115-203ENST00000442217 SMG6Q86US8 1419 aaKnown RBP25.1■■□□□ 1.61
CCDC115-203ENST00000442217 PNPLA6Q8IY17 1366 aa25.08■■□□□ 1.61
CCDC115-203ENST00000442217 PEAK1Q9H792 1746 aa25.08■■□□□ 1.61
CCDC115-203ENST00000442217 PLEKHG5O94827 1062 aa25.07■■□□□ 1.6
CCDC115-203ENST00000442217 LMOD2Q6P5Q4 547 aa25.07■■□□□ 1.6
CCDC115-203ENST00000442217 CDK12Q9NYV4 1490 aaPredicted RBP25.07■■□□□ 1.6
CCDC115-203ENST00000442217 ALS2Q96Q42 1657 aa25.06■■□□□ 1.6
CCDC115-203ENST00000442217 NPHP3Q7Z494 1330 aa25.06■■□□□ 1.6
CCDC115-203ENST00000442217 CCDC146Q8IYE0 955 aa25.06■■□□□ 1.6
CCDC115-203ENST00000442217 PXDNQ92626 1479 aa25.06■■□□□ 1.6
CCDC115-203ENST00000442217 INSRP06213 1382 aa25.04■■□□□ 1.6
CCDC115-203ENST00000442217 MAP3K19Q56UN5 1328 aa25.04■■□□□ 1.6
CCDC115-203ENST00000442217 DIAPH1O60610 1272 aaKnown RBP25.03■■□□□ 1.6
CCDC115-203ENST00000442217 ZBED9Q6R2W3 1325 aa25.03■■□□□ 1.6
CCDC115-203ENST00000442217 U2SURPO15042 1029 aaKnown RBP25.02■■□□□ 1.6
CCDC115-203ENST00000442217 SALL2Q9Y467 1007 aaPredicted RBP25.02■■□□□ 1.6
CCDC115-203ENST00000442217 U2AF1L5P0DN76 240 aaPredicted RBP25.01■■□□□ 1.59
CCDC115-203ENST00000442217 U2AF1Q01081 240 aaKnown RBP eCLIP25.01■■□□□ 1.59
CCDC115-203ENST00000442217 NFAT5O94916 1531 aa25■■□□□ 1.59
CCDC115-203ENST00000442217 SBNO1A3KN83 1393 aa25■■□□□ 1.59
CCDC115-203ENST00000442217 LTN1O94822 1766 aa25■■□□□ 1.59
CCDC115-203ENST00000442217 NUDCQ9Y266 331 aa24.99■■□□□ 1.59
CCDC115-203ENST00000442217 TNS3Q68CZ2 1445 aa24.98■■□□□ 1.59
CCDC115-203ENST00000442217 SLIT3O75094 1523 aa24.98■■□□□ 1.59
CCDC115-203ENST00000442217 NHSL1Q5SYE7 1610 aa24.98■■□□□ 1.59
CCDC115-203ENST00000442217 HSP90AB2PQ58FF8 381 aa24.98■■□□□ 1.59
CCDC115-203ENST00000442217 MED1Q15648 1581 aaPredicted RBP24.97■■□□□ 1.59
CCDC115-203ENST00000442217 IL13P35225 146 aa24.97■■□□□ 1.59
CCDC115-203ENST00000442217 ROBO1Q9Y6N7 1651 aa24.96■■□□□ 1.59
CCDC115-203ENST00000442217 USP19O94966 1318 aa24.95■■□□□ 1.59
CCDC115-203ENST00000442217 SPATA31A3Q5VYP0 1347 aa24.95■■□□□ 1.59
CCDC115-203ENST00000442217 AMPHP49418 695 aa24.95■■□□□ 1.58
CCDC115-203ENST00000442217 FLT4P35916 1363 aa24.94■■□□□ 1.58
CCDC115-203ENST00000442217 SOS2Q07890 1332 aaPredicted RBP24.94■■□□□ 1.58
CCDC115-203ENST00000442217 ZBTB7CA1YPR0 619 aa24.93■■□□□ 1.58
CCDC115-203ENST00000442217 EIF4A2Q14240 407 aaKnown RBP24.93■■□□□ 1.58
CCDC115-203ENST00000442217 KCNH5Q8NCM2 988 aa24.93■■□□□ 1.58
CCDC115-203ENST00000442217 APAF1O14727 1248 aa24.93■■□□□ 1.58
CCDC115-203ENST00000442217 GCP02774 474 aa24.93■■□□□ 1.58
CCDC115-203ENST00000442217 PHRF1Q9P1Y6 1649 aaKnown RBP24.92■■□□□ 1.58
CCDC115-203ENST00000442217 CABLES1Q8TDN4 633 aa24.91■■□□□ 1.58
CCDC115-203ENST00000442217 HOXC9P31274 260 aa24.91■■□□□ 1.58
CCDC115-203ENST00000442217 RUNDC1Q96C34 613 aa24.91■■□□□ 1.58
CCDC115-203ENST00000442217 CRYBG1Q9Y4K1 1723 aa24.9■■□□□ 1.58
CCDC115-203ENST00000442217 HMOX1P09601 288 aa24.9■■□□□ 1.58
CCDC115-203ENST00000442217 ARHGEF10O15013 1369 aa24.88■■□□□ 1.57
CCDC115-203ENST00000442217 IQSEC2Q5JU85 1478 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms