RNA–Protein interactions for RNA: ENST00000441883.5

MRPL28-204, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 800 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-204ENST00000441883 POLR3AO14802 1390 aaPredicted RBP38.95■■■■□ 3.83
MRPL28-204ENST00000441883 PLEKHG3A1L390 1219 aa38.95■■■■□ 3.83
MRPL28-204ENST00000441883 VPS72Q15906 364 aa38.95■■■■□ 3.83
MRPL28-204ENST00000441883 CRYBG1Q9Y4K1 1723 aa38.94■■■■□ 3.82
MRPL28-204ENST00000441883 ACEP12821 1306 aa38.93■■■■□ 3.82
MRPL28-204ENST00000441883 TRPM1Q7Z4N2 1603 aa38.93■■■■□ 3.82
MRPL28-204ENST00000441883 NBPF8Q3BBV2 869 aa38.93■■■■□ 3.82
MRPL28-204ENST00000441883 QRICH2Q9H0J4 1663 aa38.88■■■■□ 3.81
MRPL28-204ENST00000441883 SRPK2P78362 688 aaKnown RBP38.87■■■■□ 3.81
MRPL28-204ENST00000441883 CABP2Q9NPB3 220 aa38.87■■■■□ 3.81
MRPL28-204ENST00000441883 ONECUT3O60422 494 aaPredicted RBP38.85■■■■□ 3.81
MRPL28-204ENST00000441883 BTG4Q9NY30 223 aa38.85■■■■□ 3.81
MRPL28-204ENST00000441883 NRAPQ86VF7 1730 aa38.85■■■■□ 3.81
MRPL28-204ENST00000441883 COL14A1Q05707 1796 aaKnown RBP38.85■■■■□ 3.81
MRPL28-204ENST00000441883 EP400Q96L91 3159 aa38.82■■■■□ 3.81
MRPL28-204ENST00000441883 CCDC9Q9Y3X0 531 aaKnown RBP38.82■■■■□ 3.8
MRPL28-204ENST00000441883 BRWD3Q6RI45 1802 aa38.82■■■■□ 3.8
MRPL28-204ENST00000441883 PPIP5K1Q6PFW1 1433 aa38.81■■■■□ 3.8
MRPL28-204ENST00000441883 SEPT12Q8IYM1 358 aa38.81■■■■□ 3.8
MRPL28-204ENST00000441883 NUTM2GQ5VZR2 741 aa38.8■■■■□ 3.8
MRPL28-204ENST00000441883 ROCK2O75116 1388 aaKnown RBP38.8■■■■□ 3.8
MRPL28-204ENST00000441883 PHRF1Q9P1Y6 1649 aaKnown RBP38.77■■■■□ 3.8
MRPL28-204ENST00000441883 PRDM11Q9NQV5 511 aa38.76■■■■□ 3.8
MRPL28-204ENST00000441883 KIAA0232Q92628 1395 aa38.74■■■■□ 3.79
MRPL28-204ENST00000441883 CABP1Q9NZU7 370 aa38.74■■■■□ 3.79
MRPL28-204ENST00000441883 ABTB2Q8N961 1025 aa38.73■■■■□ 3.79
MRPL28-204ENST00000441883 CCDC125Q86Z20 511 aa38.72■■■■□ 3.79
MRPL28-204ENST00000441883 ZC3H6P61129 1189 aaKnown RBP38.71■■■■□ 3.79
MRPL28-204ENST00000441883 TRIM26Q12899 539 aaPredicted RBP38.71■■■■□ 3.79
MRPL28-204ENST00000441883 EVC2Q86UK5 1308 aa38.7■■■■□ 3.79
MRPL28-204ENST00000441883 CHRNA2Q15822 529 aa38.7■■■■□ 3.79
MRPL28-204ENST00000441883 SPATA31A5Q5VU36 1347 aa38.68■■■■□ 3.78
MRPL28-204ENST00000441883 SPATA31A7Q8IWB4 1347 aa38.68■■■■□ 3.78
MRPL28-204ENST00000441883 FAM98CQ17RN3 349 aaKnown RBP38.67■■■■□ 3.78
MRPL28-204ENST00000441883 USP19O94966 1318 aa38.66■■■■□ 3.78
MRPL28-204ENST00000441883 BRD4O60885 1362 aaPredicted RBP38.66■■■■□ 3.78
MRPL28-204ENST00000441883 KRT27Q7Z3Y8 459 aa38.65■■■■□ 3.78
MRPL28-204ENST00000441883 USP6P35125 1406 aa38.63■■■■□ 3.78
MRPL28-204ENST00000441883 NRKQ7Z2Y5 1582 aa38.63■■■■□ 3.77
MRPL28-204ENST00000441883 NLRP13Q86W25 1043 aa38.63■■■■□ 3.77
MRPL28-204ENST00000441883 SSH2Q76I76 1423 aa38.61■■■■□ 3.77
MRPL28-204ENST00000441883 BLMP54132 1417 aaPredicted RBP38.6■■■■□ 3.77
MRPL28-204ENST00000441883 TONSLQ96HA7 1378 aa38.59■■■■□ 3.77
MRPL28-204ENST00000441883 CPDO75976 1380 aa38.58■■■■□ 3.77
MRPL28-204ENST00000441883 GCP02774 474 aa38.58■■■■□ 3.77
MRPL28-204ENST00000441883 A0A0G2JS52 829 aa38.57■■■■□ 3.76
MRPL28-204ENST00000441883 MYT1Q01538 1121 aa38.57■■■■□ 3.76
MRPL28-204ENST00000441883 CARD11Q9BXL7 1154 aa38.57■■■■□ 3.76
MRPL28-204ENST00000441883 STRN4Q9NRL3 753 aa38.56■■■■□ 3.76
MRPL28-204ENST00000441883 SPATA31A1Q5TZJ5 1347 aa38.56■■■■□ 3.76
MRPL28-204ENST00000441883 CAMTA1Q9Y6Y1 1673 aa38.55■■■■□ 3.76
MRPL28-204ENST00000441883 SBNO2Q9Y2G9 1366 aa38.53■■■■□ 3.76
MRPL28-204ENST00000441883 LMO7Q8WWI1 1683 aa38.52■■■■□ 3.76
MRPL28-204ENST00000441883 THSD7AQ9UPZ6 1657 aa38.52■■■■□ 3.76
MRPL28-204ENST00000441883 NLRP6P59044 892 aa38.52■■■■□ 3.76
MRPL28-204ENST00000441883 ZNF692Q9BU19 519 aaPredicted RBP38.5■■■■□ 3.75
MRPL28-204ENST00000441883 AKAP12Q02952 1782 aa38.49■■■■□ 3.75
MRPL28-204ENST00000441883 EVA1CP58658 441 aa38.48■■■■□ 3.75
MRPL28-204ENST00000441883 DEFB132Q7Z7B7 95 aa38.48■■■■□ 3.75
MRPL28-204ENST00000441883 PIK3C2AO00443 1686 aa38.48■■■■□ 3.75
MRPL28-204ENST00000441883 CPSF1Q10570 1443 aaKnown RBP38.47■■■■□ 3.75
MRPL28-204ENST00000441883 SLIT3O75094 1523 aa38.47■■■■□ 3.75
MRPL28-204ENST00000441883 TTC21BQ7Z4L5 1316 aa38.46■■■■□ 3.75
MRPL28-204ENST00000441883 LARP1Q6PKG0 1096 aaKnown RBP38.45■■■■□ 3.75
MRPL28-204ENST00000441883 FAM182BQ5T319 152 aa38.44■■■■□ 3.74
MRPL28-204ENST00000441883 SF3B2Q13435 895 aaKnown RBP38.42■■■■□ 3.74
MRPL28-204ENST00000441883 USP35Q9P2H5 1018 aa38.42■■■■□ 3.74
MRPL28-204ENST00000441883 ZRANB1Q9UGI0 708 aa38.42■■■■□ 3.74
MRPL28-204ENST00000441883 BARGINQ6ZT62 677 aa38.4■■■■□ 3.74
MRPL28-204ENST00000441883 COL5A2P05997 1499 aaPredicted RBP38.38■■■■□ 3.73
MRPL28-204ENST00000441883 TTC21AQ8NDW8 1320 aa38.38■■■■□ 3.73
MRPL28-204ENST00000441883 AATKQ6ZMQ8 1374 aa38.37■■■■□ 3.73
MRPL28-204ENST00000441883 KTN1Q86UP2 1357 aaKnown RBP38.37■■■■□ 3.73
MRPL28-204ENST00000441883 COL18A1P39060 1754 aa38.35■■■■□ 3.73
MRPL28-204ENST00000441883 ZBTB7CA1YPR0 619 aa38.34■■■■□ 3.73
MRPL28-204ENST00000441883 TCP11L2Q8N4U5 519 aa38.34■■■■□ 3.73
MRPL28-204ENST00000441883 CD163L1Q9NR16 1453 aa38.34■■■■□ 3.73
MRPL28-204ENST00000441883 MON2Q7Z3U7 1717 aa38.33■■■■□ 3.73
MRPL28-204ENST00000441883 ARHGEF25Q86VW2 580 aa38.3■■■■□ 3.72
MRPL28-204ENST00000441883 AXIN2Q9Y2T1 843 aa38.3■■■■□ 3.72
MRPL28-204ENST00000441883 KCNH5Q8NCM2 988 aa38.29■■■■□ 3.72
MRPL28-204ENST00000441883 TESK2Q96S53 571 aa38.29■■■■□ 3.72
MRPL28-204ENST00000441883 SLC12A5Q9H2X9 1139 aa38.29■■■■□ 3.72
MRPL28-204ENST00000441883 THRAP3Q9Y2W1 955 aaKnown RBP38.29■■■■□ 3.72
MRPL28-204ENST00000441883 BAG6P46379 1132 aa38.28■■■■□ 3.72
MRPL28-204ENST00000441883 TMC1Q8TDI8 760 aa38.28■■■■□ 3.72
MRPL28-204ENST00000441883 PUS7Q96PZ0 661 aaKnown RBP38.28■■■■□ 3.72
MRPL28-204ENST00000441883 RGPD1P0DJD0 1748 aa38.28■■■■□ 3.72
MRPL28-204ENST00000441883 CRB1P82279 1406 aa38.27■■■■□ 3.72
MRPL28-204ENST00000441883 ST20-MTHFSA0A0A6YYL1 179 aa38.26■■■■□ 3.72
MRPL28-204ENST00000441883 FAM196AQ6ZSG2 479 aa38.25■■■■□ 3.71
MRPL28-204ENST00000441883 SOX12O15370 315 aa38.24■■■■□ 3.71
MRPL28-204ENST00000441883 SUGP2Q8IX01 1082 aaKnown RBP eCLIP38.24■■■■□ 3.71
MRPL28-204ENST00000441883 SRCAPQ6ZRS2 3230 aa38.24■■■■□ 3.71
MRPL28-204ENST00000441883 USP31Q70CQ4 1352 aa38.23■■■■□ 3.71
MRPL28-204ENST00000441883 PDE3BQ13370 1112 aa38.23■■■■□ 3.71
MRPL28-204ENST00000441883 NFAT5O94916 1531 aa38.22■■■■□ 3.71
MRPL28-204ENST00000441883 TNS1Q9HBL0 1735 aaKnown RBP38.21■■■■□ 3.71
MRPL28-204ENST00000441883 EN1Q05925 392 aaPredicted RBP38.21■■■■□ 3.71
MRPL28-204ENST00000441883 RGPD5Q99666 1765 aa38.21■■■■□ 3.71
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms