RNA–Protein interactions for RNA: ENST00000441298.5

ZNF3-209, Transcript of zinc finger protein 3, humanhuman

TSL 4

Gene ZNF3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-209ENST00000441298 CARD11Q9BXL7 1154 aa18.22■□□□□ 0.51
ZNF3-209ENST00000441298 RALGAPBQ86X10 1494 aa18.21■□□□□ 0.51
ZNF3-209ENST00000441298 NUTM2GQ5VZR2 741 aa18.21■□□□□ 0.51
ZNF3-209ENST00000441298 PCGF6Q9BYE7 350 aa18.21■□□□□ 0.51
ZNF3-209ENST00000441298 EVC2Q86UK5 1308 aa18.21■□□□□ 0.51
ZNF3-209ENST00000441298 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.2■□□□□ 0.5
ZNF3-209ENST00000441298 POLR3AO14802 1390 aaPredicted RBP18.19■□□□□ 0.5
ZNF3-209ENST00000441298 SLIT2O94813 1529 aa18.19■□□□□ 0.5
ZNF3-209ENST00000441298 CCDC9Q9Y3X0 531 aaKnown RBP18.19■□□□□ 0.5
ZNF3-209ENST00000441298 UNC5CLQ8IV45 518 aa18.18■□□□□ 0.5
ZNF3-209ENST00000441298 CRYBG1Q9Y4K1 1723 aa18.18■□□□□ 0.5
ZNF3-209ENST00000441298 PLEKHG3A1L390 1219 aa18.17■□□□□ 0.5
ZNF3-209ENST00000441298 NWD2Q9ULI1 1742 aa18.17■□□□□ 0.5
ZNF3-209ENST00000441298 PHRF1Q9P1Y6 1649 aaKnown RBP18.16■□□□□ 0.5
ZNF3-209ENST00000441298 CABP1Q9NZU7 370 aa18.16■□□□□ 0.5
ZNF3-209ENST00000441298 FAM83GA6ND36 823 aa18.15■□□□□ 0.5
ZNF3-209ENST00000441298 GJD4Q96KN9 370 aaPredicted RBP18.15■□□□□ 0.5
ZNF3-209ENST00000441298 COL14A1Q05707 1796 aaKnown RBP18.14■□□□□ 0.5
ZNF3-209ENST00000441298 GLI3P10071 1580 aa18.14■□□□□ 0.49
ZNF3-209ENST00000441298 ABTB2Q8N961 1025 aa18.14■□□□□ 0.49
ZNF3-209ENST00000441298 PRDM11Q9NQV5 511 aa18.14■□□□□ 0.49
ZNF3-209ENST00000441298 NRAPQ86VF7 1730 aa18.12■□□□□ 0.49
ZNF3-209ENST00000441298 A0A0G2JS52 829 aa18.12■□□□□ 0.49
ZNF3-209ENST00000441298 MYT1Q01538 1121 aa18.12■□□□□ 0.49
ZNF3-209ENST00000441298 UPF1Q92900 1129 aaKnown RBP eCLIP18.12■□□□□ 0.49
ZNF3-209ENST00000441298 BTG4Q9NY30 223 aa18.12■□□□□ 0.49
ZNF3-209ENST00000441298 KIAA0232Q92628 1395 aa18.12■□□□□ 0.49
ZNF3-209ENST00000441298 USP6P35125 1406 aa18.12■□□□□ 0.49
ZNF3-209ENST00000441298 ZC3H6P61129 1189 aaKnown RBP18.11■□□□□ 0.49
ZNF3-209ENST00000441298 CHRNA2Q15822 529 aa18.11■□□□□ 0.49
ZNF3-209ENST00000441298 ATAD2Q6PL18 1390 aa18.11■□□□□ 0.49
ZNF3-209ENST00000441298 NRKQ7Z2Y5 1582 aa18.11■□□□□ 0.49
ZNF3-209ENST00000441298 VPS72Q15906 364 aa18.1■□□□□ 0.49
ZNF3-209ENST00000441298 ZBTB7CA1YPR0 619 aa18.09■□□□□ 0.49
ZNF3-209ENST00000441298 SBNO2Q9Y2G9 1366 aa18.08■□□□□ 0.49
ZNF3-209ENST00000441298 STRN4Q9NRL3 753 aa18.08■□□□□ 0.48
ZNF3-209ENST00000441298 AKAP12Q02952 1782 aa18.08■□□□□ 0.48
ZNF3-209ENST00000441298 TMC1Q8TDI8 760 aa18.07■□□□□ 0.48
ZNF3-209ENST00000441298 PIK3C2AO00443 1686 aa18.06■□□□□ 0.48
ZNF3-209ENST00000441298 NLRP6P59044 892 aa18.06■□□□□ 0.48
ZNF3-209ENST00000441298 NLRP13Q86W25 1043 aa18.06■□□□□ 0.48
ZNF3-209ENST00000441298 BRWD3Q6RI45 1802 aa18.05■□□□□ 0.48
ZNF3-209ENST00000441298 USP19O94966 1318 aa18.05■□□□□ 0.48
ZNF3-209ENST00000441298 SEPT12Q8IYM1 358 aa18.05■□□□□ 0.48
ZNF3-209ENST00000441298 BRD4O60885 1362 aaPredicted RBP18.04■□□□□ 0.48
ZNF3-209ENST00000441298 KTN1Q86UP2 1357 aaKnown RBP18.04■□□□□ 0.48
ZNF3-209ENST00000441298 FAM98CQ17RN3 349 aaKnown RBP18.04■□□□□ 0.48
ZNF3-209ENST00000441298 CCER1Q8TC90 406 aaPredicted RBP18.04■□□□□ 0.48
ZNF3-209ENST00000441298 ST20-MTHFSA0A0A6YYL1 179 aa18.03■□□□□ 0.48
ZNF3-209ENST00000441298 SOX12O15370 315 aa18.03■□□□□ 0.48
ZNF3-209ENST00000441298 MON2Q7Z3U7 1717 aa18.03■□□□□ 0.48
ZNF3-209ENST00000441298 USP47Q96K76 1375 aa18.03■□□□□ 0.48
ZNF3-209ENST00000441298 GCP02774 474 aa18.02■□□□□ 0.48
ZNF3-209ENST00000441298 TTC21BQ7Z4L5 1316 aa18.01■□□□□ 0.47
ZNF3-209ENST00000441298 SSH2Q76I76 1423 aa18.01■□□□□ 0.47
ZNF3-209ENST00000441298 EVA1CP58658 441 aa18.01■□□□□ 0.47
ZNF3-209ENST00000441298 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.01■□□□□ 0.47
ZNF3-209ENST00000441298 ZNF692Q9BU19 519 aaPredicted RBP18.01■□□□□ 0.47
ZNF3-209ENST00000441298 USP35Q9P2H5 1018 aa18.01■□□□□ 0.47
ZNF3-209ENST00000441298 SPATA31A5Q5VU36 1347 aa17.99■□□□□ 0.47
ZNF3-209ENST00000441298 SPATA31A7Q8IWB4 1347 aa17.99■□□□□ 0.47
ZNF3-209ENST00000441298 CLSPNQ9HAW4 1339 aa17.99■□□□□ 0.47
ZNF3-209ENST00000441298 CPSF1Q10570 1443 aaKnown RBP17.99■□□□□ 0.47
ZNF3-209ENST00000441298 SLIT3O75094 1523 aa17.99■□□□□ 0.47
ZNF3-209ENST00000441298 HDGFL2Q7Z4V5 671 aaPredicted RBP17.99■□□□□ 0.47
ZNF3-209ENST00000441298 CPDO75976 1380 aa17.99■□□□□ 0.47
ZNF3-209ENST00000441298 LMO7Q8WWI1 1683 aa17.99■□□□□ 0.47
ZNF3-209ENST00000441298 TESK2Q96S53 571 aa17.98■□□□□ 0.47
ZNF3-209ENST00000441298 SLC12A5Q9H2X9 1139 aa17.98■□□□□ 0.47
ZNF3-209ENST00000441298 CAMTA1Q9Y6Y1 1673 aa17.98■□□□□ 0.47
ZNF3-209ENST00000441298 TTC21AQ8NDW8 1320 aa17.98■□□□□ 0.47
ZNF3-209ENST00000441298 KRT27Q7Z3Y8 459 aa17.97■□□□□ 0.47
ZNF3-209ENST00000441298 CD163L1Q9NR16 1453 aa17.96■□□□□ 0.47
ZNF3-209ENST00000441298 A0A1W2PP64 1363 aa17.95■□□□□ 0.46
ZNF3-209ENST00000441298 LARP1Q6PKG0 1096 aaKnown RBP17.95■□□□□ 0.46
ZNF3-209ENST00000441298 TERF2IPQ9NYB0 399 aa17.95■□□□□ 0.46
ZNF3-209ENST00000441298 ZRANB1Q9UGI0 708 aa17.95■□□□□ 0.46
ZNF3-209ENST00000441298 SPATA31A1Q5TZJ5 1347 aa17.95■□□□□ 0.46
ZNF3-209ENST00000441298 THSD7AQ9UPZ6 1657 aa17.94■□□□□ 0.46
ZNF3-209ENST00000441298 NME9Q86XW9 330 aa17.94■□□□□ 0.46
ZNF3-209ENST00000441298 COL5A2P05997 1499 aaPredicted RBP17.94■□□□□ 0.46
ZNF3-209ENST00000441298 ONECUT3O60422 494 aaPredicted RBP17.93■□□□□ 0.46
ZNF3-209ENST00000441298 TMF1P82094 1093 aa17.93■□□□□ 0.46
ZNF3-209ENST00000441298 FAM182BQ5T319 152 aa17.93■□□□□ 0.46
ZNF3-209ENST00000441298 KCNH5Q8NCM2 988 aa17.93■□□□□ 0.46
ZNF3-209ENST00000441298 EDC4Q6P2E9 1401 aaKnown RBP17.92■□□□□ 0.46
ZNF3-209ENST00000441298 TIMELESSQ9UNS1 1208 aa17.92■□□□□ 0.46
ZNF3-209ENST00000441298 SF3B2Q13435 895 aaKnown RBP17.91■□□□□ 0.46
ZNF3-209ENST00000441298 NFAT5O94916 1531 aa17.91■□□□□ 0.46
ZNF3-209ENST00000441298 AATKQ6ZMQ8 1374 aa17.91■□□□□ 0.46
ZNF3-209ENST00000441298 NINLQ9Y2I6 1382 aa17.91■□□□□ 0.46
ZNF3-209ENST00000441298 BLMP54132 1417 aaPredicted RBP17.9■□□□□ 0.46
ZNF3-209ENST00000441298 EP400Q96L91 3159 aa17.9■□□□□ 0.46
ZNF3-209ENST00000441298 RGPD5Q99666 1765 aa17.9■□□□□ 0.46
ZNF3-209ENST00000441298 SLC24A1O60721 1099 aa17.9■□□□□ 0.46
ZNF3-209ENST00000441298 CSB-PGBD3P0DP91 1061 aa17.89■□□□□ 0.45
ZNF3-209ENST00000441298 TCP11L2Q8N4U5 519 aa17.89■□□□□ 0.45
ZNF3-209ENST00000441298 PUS7Q96PZ0 661 aaKnown RBP17.89■□□□□ 0.45
ZNF3-209ENST00000441298 COL18A1P39060 1754 aa17.89■□□□□ 0.45
ZNF3-209ENST00000441298 TOM1L2Q6ZVM7 507 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms