RNA–Protein interactions for RNA: ENST00000441012.6

NR1H3-211, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1H3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-211ENST00000441012 RUNDC1Q96C34 613 aa19.84■□□□□ 0.77
NR1H3-211ENST00000441012 CCDC27Q2M243 656 aa19.83■□□□□ 0.76
NR1H3-211ENST00000441012 TBX22Q9Y458 520 aa19.83■□□□□ 0.76
NR1H3-211ENST00000441012 TERF2IPQ9NYB0 399 aa19.81■□□□□ 0.76
NR1H3-211ENST00000441012 CCDC146Q8IYE0 955 aa19.8■□□□□ 0.76
NR1H3-211ENST00000441012 CRBNQ96SW2 442 aa19.8■□□□□ 0.76
NR1H3-211ENST00000441012 RGS17Q9UGC6 210 aaPredicted RBP19.8■□□□□ 0.76
NR1H3-211ENST00000441012 COL16A1Q07092 1604 aaPredicted RBP19.8■□□□□ 0.76
NR1H3-211ENST00000441012 NCOA3Q9Y6Q9 1424 aa19.79■□□□□ 0.76
NR1H3-211ENST00000441012 PIK3R4Q99570 1358 aa19.79■□□□□ 0.76
NR1H3-211ENST00000441012 WDR63Q8IWG1 891 aa19.79■□□□□ 0.76
NR1H3-211ENST00000441012 CABP2Q9NPB3 220 aa19.79■□□□□ 0.76
NR1H3-211ENST00000441012 SLAIN2Q9P270 581 aa19.79■□□□□ 0.76
NR1H3-211ENST00000441012 XRN1Q8IZH2 1706 aaKnown RBP19.79■□□□□ 0.76
NR1H3-211ENST00000441012 A0A1W2PP64 1363 aa19.78■□□□□ 0.76
NR1H3-211ENST00000441012 MTHFSP49914 203 aa19.78■□□□□ 0.76
NR1H3-211ENST00000441012 WWC1Q8IX03 1113 aa19.78■□□□□ 0.76
NR1H3-211ENST00000441012 MSH5O43196 834 aa19.77■□□□□ 0.76
NR1H3-211ENST00000441012 PLIN1O60240 522 aa19.77■□□□□ 0.76
NR1H3-211ENST00000441012 PRAM1Q96QH2 718 aa19.77■□□□□ 0.76
NR1H3-211ENST00000441012 ANKRD26Q9UPS8 1709 aa19.77■□□□□ 0.76
NR1H3-211ENST00000441012 SIRT1Q96EB6 747 aa19.76■□□□□ 0.75
NR1H3-211ENST00000441012 POGKQ9P215 609 aa19.76■□□□□ 0.75
NR1H3-211ENST00000441012 CD163L1Q9NR16 1453 aa19.76■□□□□ 0.75
NR1H3-211ENST00000441012 SRPK2P78362 688 aaKnown RBP19.76■□□□□ 0.75
NR1H3-211ENST00000441012 PTPRUQ92729 1446 aa19.76■□□□□ 0.75
NR1H3-211ENST00000441012 SETD1AO15047 1707 aaKnown RBP19.75■□□□□ 0.75
NR1H3-211ENST00000441012 STK26Q9P289 416 aa19.75■□□□□ 0.75
NR1H3-211ENST00000441012 PDE3AQ14432 1141 aa19.73■□□□□ 0.75
NR1H3-211ENST00000441012 CENPQQ7L2Z9 268 aaPredicted RBP19.73■□□□□ 0.75
NR1H3-211ENST00000441012 C14orf37Q86TY3 774 aa19.73■□□□□ 0.75
NR1H3-211ENST00000441012 SPINK5Q9NQ38 1064 aaPredicted RBP19.73■□□□□ 0.75
NR1H3-211ENST00000441012 ATP7BP35670 1465 aa19.73■□□□□ 0.75
NR1H3-211ENST00000441012 KDM2BQ8NHM5 1336 aa19.73■□□□□ 0.75
NR1H3-211ENST00000441012 ADGRB2O60241 1585 aa19.73■□□□□ 0.75
NR1H3-211ENST00000441012 HDGFL2Q7Z4V5 671 aaPredicted RBP19.73■□□□□ 0.75
NR1H3-211ENST00000441012 AHDC1Q5TGY3 1603 aaPredicted RBP19.72■□□□□ 0.75
NR1H3-211ENST00000441012 AAMPQ13685 434 aa19.72■□□□□ 0.75
NR1H3-211ENST00000441012 TCP11L2Q8N4U5 519 aa19.71■□□□□ 0.75
NR1H3-211ENST00000441012 JCADQ9P266 1359 aa19.71■□□□□ 0.75
NR1H3-211ENST00000441012 COL3A1P02461 1466 aaPredicted RBP19.71■□□□□ 0.75
NR1H3-211ENST00000441012 C20orf194Q5TEA3 1177 aa19.7■□□□□ 0.74
NR1H3-211ENST00000441012 CDK19Q9BWU1 502 aa19.7■□□□□ 0.74
NR1H3-211ENST00000441012 AMOTL2Q9Y2J4 779 aa19.7■□□□□ 0.74
NR1H3-211ENST00000441012 TECPR2O15040 1411 aa19.7■□□□□ 0.74
NR1H3-211ENST00000441012 MINK1Q8N4C8 1332 aaPredicted RBP19.7■□□□□ 0.74
NR1H3-211ENST00000441012 PNPLA6Q8IY17 1366 aa19.69■□□□□ 0.74
NR1H3-211ENST00000441012 FYB1O15117 783 aa19.69■□□□□ 0.74
NR1H3-211ENST00000441012 CADPS2Q86UW7 1296 aa19.69■□□□□ 0.74
NR1H3-211ENST00000441012 C19orf44Q9H6X5 657 aa19.69■□□□□ 0.74
NR1H3-211ENST00000441012 NALCNQ8IZF0 1738 aa19.68■□□□□ 0.74
NR1H3-211ENST00000441012 CT47B1P0C2W7 299 aaPredicted RBP19.68■□□□□ 0.74
NR1H3-211ENST00000441012 POTEAQ6S8J7 498 aa19.68■□□□□ 0.74
NR1H3-211ENST00000441012 KNDC1Q76NI1 1749 aa19.68■□□□□ 0.74
NR1H3-211ENST00000441012 ATF3P18847 181 aa19.67■□□□□ 0.74
NR1H3-211ENST00000441012 TNNT2P45379 298 aaPredicted RBP19.67■□□□□ 0.74
NR1H3-211ENST00000441012 SAFB2Q14151 953 aaKnown RBP eCLIP19.67■□□□□ 0.74
NR1H3-211ENST00000441012 PNNQ9H307 717 aaKnown RBP19.67■□□□□ 0.74
NR1H3-211ENST00000441012 NHSL1Q5SYE7 1610 aa19.66■□□□□ 0.74
NR1H3-211ENST00000441012 ANP32AP39687 249 aaKnown RBP19.66■□□□□ 0.74
NR1H3-211ENST00000441012 LRP6O75581 1613 aa19.66■□□□□ 0.74
NR1H3-211ENST00000441012 DCCP43146 1447 aa19.66■□□□□ 0.74
NR1H3-211ENST00000441012 BACH2Q9BYV9 841 aa19.65■□□□□ 0.74
NR1H3-211ENST00000441012 MYH16Q9H6N6 1097 aa19.65■□□□□ 0.74
NR1H3-211ENST00000441012 CDC42BPGQ6DT37 1551 aa19.65■□□□□ 0.74
NR1H3-211ENST00000441012 METP08581 1390 aa19.65■□□□□ 0.74
NR1H3-211ENST00000441012 PDE4AP27815 886 aa19.64■□□□□ 0.73
NR1H3-211ENST00000441012 IL16Q14005 1332 aa19.64■□□□□ 0.73
NR1H3-211ENST00000441012 KIF20BQ96Q89 1820 aa19.63■□□□□ 0.73
NR1H3-211ENST00000441012 U2AF1L5P0DN76 240 aaPredicted RBP19.63■□□□□ 0.73
NR1H3-211ENST00000441012 U2AF1Q01081 240 aaKnown RBP eCLIP19.63■□□□□ 0.73
NR1H3-211ENST00000441012 ERICH6Q7L0X2 663 aa19.63■□□□□ 0.73
NR1H3-211ENST00000441012 PLEKHF1Q96S99 279 aa19.62■□□□□ 0.73
NR1H3-211ENST00000441012 CPSF1Q10570 1443 aaKnown RBP19.62■□□□□ 0.73
NR1H3-211ENST00000441012 IPO9Q96P70 1041 aaKnown RBP19.62■□□□□ 0.73
NR1H3-211ENST00000441012 GGNBP2Q9H3C7 697 aa19.62■□□□□ 0.73
NR1H3-211ENST00000441012 CABP1Q9NZU7 370 aa19.62■□□□□ 0.73
NR1H3-211ENST00000441012 BCAR3O75815 825 aa19.61■□□□□ 0.73
NR1H3-211ENST00000441012 RARSP54136 660 aaKnown RBP19.61■□□□□ 0.73
NR1H3-211ENST00000441012 MST1RQ04912 1400 aa19.61■□□□□ 0.73
NR1H3-211ENST00000441012 EDC4Q6P2E9 1401 aaKnown RBP19.61■□□□□ 0.73
NR1H3-211ENST00000441012 BRINP3Q76B58 766 aa19.6■□□□□ 0.73
NR1H3-211ENST00000441012 ADGRL3Q9HAR2 1447 aa19.59■□□□□ 0.73
NR1H3-211ENST00000441012 SPATA31A6Q5VVP1 1343 aa19.59■□□□□ 0.73
NR1H3-211ENST00000441012 WASLO00401 505 aaPredicted RBP19.59■□□□□ 0.73
NR1H3-211ENST00000441012 NOP58Q9Y2X3 529 aaKnown RBP19.59■□□□□ 0.73
NR1H3-211ENST00000441012 DIAPH1O60610 1272 aaKnown RBP19.58■□□□□ 0.72
NR1H3-211ENST00000441012 AATKQ6ZMQ8 1374 aa19.56■□□□□ 0.72
NR1H3-211ENST00000441012 FCHSD2O94868 740 aa19.56■□□□□ 0.72
NR1H3-211ENST00000441012 TMPOP42166 694 aaKnown RBP19.56■□□□□ 0.72
NR1H3-211ENST00000441012 WAPLQ7Z5K2 1190 aa19.56■□□□□ 0.72
NR1H3-211ENST00000441012 RRP7AQ9Y3A4 280 aaKnown RBP19.55■□□□□ 0.72
NR1H3-211ENST00000441012 MAPK8IP3Q9UPT6 1336 aa19.54■□□□□ 0.72
NR1H3-211ENST00000441012 PTCH1Q13635 1447 aa19.54■□□□□ 0.72
NR1H3-211ENST00000441012 MEX3CQ5U5Q3 659 aaKnown RBP19.54■□□□□ 0.72
NR1H3-211ENST00000441012 NEUROD2Q15784 382 aa19.53■□□□□ 0.72
NR1H3-211ENST00000441012 CLUAP1Q96AJ1 413 aa19.53■□□□□ 0.72
NR1H3-211ENST00000441012 PPIP5K1Q6PFW1 1433 aa19.52■□□□□ 0.72
NR1H3-211ENST00000441012 ZNF692Q9BU19 519 aaPredicted RBP19.52■□□□□ 0.72
NR1H3-211ENST00000441012 CCDC61Q9Y6R9 512 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms