RNA–Protein interactions for RNA: ENST00000440903.1

CCDC140-202, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC140, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-202ENST00000440903 IFT172Q9UG01 1749 aa7.09□□□□□ -1.27
CCDC140-202ENST00000440903 ZFYVE9O95405 1425 aa7.09□□□□□ -1.28
CCDC140-202ENST00000440903 TXNDC2Q86VQ3 553 aa7.08□□□□□ -1.28
CCDC140-202ENST00000440903 MYO5BQ9ULV0 1848 aa7.08□□□□□ -1.28
CCDC140-202ENST00000440903 PLEKHG1Q9ULL1 1385 aa7.08□□□□□ -1.28
CCDC140-202ENST00000440903 NPHP4O75161 1426 aaPredicted RBP7.07□□□□□ -1.28
CCDC140-202ENST00000440903 SETBP1Q9Y6X0 1596 aa7.07□□□□□ -1.28
CCDC140-202ENST00000440903 IQGAP1P46940 1657 aa7.06□□□□□ -1.28
CCDC140-202ENST00000440903 L3MBTL2Q969R5 705 aa7.06□□□□□ -1.28
CCDC140-202ENST00000440903 PHF8Q9UPP1 1060 aa7.06□□□□□ -1.28
CCDC140-202ENST00000440903 KDM2AQ9Y2K7 1162 aa7.06□□□□□ -1.28
CCDC140-202ENST00000440903 PIK3C2GO75747 1445 aa7.06□□□□□ -1.28
CCDC140-202ENST00000440903 PRAG1Q86YV5 1406 aa7.06□□□□□ -1.28
CCDC140-202ENST00000440903 EIF3AQ14152 1382 aaKnown RBP7.06□□□□□ -1.28
CCDC140-202ENST00000440903 RALGAPBQ86X10 1494 aa7.05□□□□□ -1.28
CCDC140-202ENST00000440903 NRXN1Q9ULB1 1477 aa7.05□□□□□ -1.28
CCDC140-202ENST00000440903 KIAA1210Q9ULL0 1709 aa7.05□□□□□ -1.28
CCDC140-202ENST00000440903 HSPA2P54652 639 aa7.05□□□□□ -1.28
CCDC140-202ENST00000440903 MS4A4AQ96JQ5 239 aa7.05□□□□□ -1.28
CCDC140-202ENST00000440903 HCSTQ9UBK5 93 aa7.05□□□□□ -1.28
CCDC140-202ENST00000440903 ROCK2O75116 1388 aaKnown RBP7.05□□□□□ -1.28
CCDC140-202ENST00000440903 MED14O60244 1454 aa7.04□□□□□ -1.28
CCDC140-202ENST00000440903 PBX2P40425 430 aa7.04□□□□□ -1.28
CCDC140-202ENST00000440903 NUTM2DQ5VT03 806 aaPredicted RBP7.04□□□□□ -1.28
CCDC140-202ENST00000440903 PIK3R4Q99570 1358 aa7.04□□□□□ -1.28
CCDC140-202ENST00000440903 TRPM1Q7Z4N2 1603 aa7.03□□□□□ -1.28
CCDC140-202ENST00000440903 NUDT7P0C024 238 aa7.03□□□□□ -1.28
CCDC140-202ENST00000440903 AXIN2Q9Y2T1 843 aa7.03□□□□□ -1.28
CCDC140-202ENST00000440903 ADGRF5Q8IZF2 1346 aa7.02□□□□□ -1.28
CCDC140-202ENST00000440903 ALKQ9UM73 1620 aa7.02□□□□□ -1.29
CCDC140-202ENST00000440903 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.02□□□□□ -1.29
CCDC140-202ENST00000440903 RIOK3O14730 519 aaKnown RBP7.02□□□□□ -1.29
CCDC140-202ENST00000440903 ZFP91Q96JP5 570 aaPredicted RBP7.02□□□□□ -1.29
CCDC140-202ENST00000440903 NCKAP5LQ9HCH0 1330 aa7.01□□□□□ -1.29
CCDC140-202ENST00000440903 NRXN3Q9Y4C0 1643 aa7.01□□□□□ -1.29
CCDC140-202ENST00000440903 NKTRP30414 1462 aaKnown RBP7.01□□□□□ -1.29
CCDC140-202ENST00000440903 LTKP29376 864 aa7.01□□□□□ -1.29
CCDC140-202ENST00000440903 CARD11Q9BXL7 1154 aa7.01□□□□□ -1.29
CCDC140-202ENST00000440903 TBX22Q9Y458 520 aa7.01□□□□□ -1.29
CCDC140-202ENST00000440903 ADAMTS13Q76LX8 1427 aa7.01□□□□□ -1.29
CCDC140-202ENST00000440903 GPRASP1Q5JY77 1395 aa7□□□□□ -1.29
CCDC140-202ENST00000440903 SLC26A8Q96RN1 970 aa7□□□□□ -1.29
CCDC140-202ENST00000440903 C14orf93Q9H972 538 aaKnown RBP7□□□□□ -1.29
CCDC140-202ENST00000440903 KNDC1Q76NI1 1749 aa7□□□□□ -1.29
CCDC140-202ENST00000440903 PTCH1Q13635 1447 aa7□□□□□ -1.29
CCDC140-202ENST00000440903 YTHDC2Q9H6S0 1430 aaKnown RBP7□□□□□ -1.29
CCDC140-202ENST00000440903 NWD1Q149M9 1564 aa6.99□□□□□ -1.29
CCDC140-202ENST00000440903 LRPPRCP42704 1394 aaKnown RBP6.99□□□□□ -1.29
CCDC140-202ENST00000440903 SLC24A1O60721 1099 aa6.99□□□□□ -1.29
CCDC140-202ENST00000440903 NLRP6P59044 892 aa6.99□□□□□ -1.29
CCDC140-202ENST00000440903 CFAP70Q5T0N1 1121 aa6.99□□□□□ -1.29
CCDC140-202ENST00000440903 LHX6Q9UPM6 363 aa6.99□□□□□ -1.29
CCDC140-202ENST00000440903 CPS1P31327 1500 aa6.99□□□□□ -1.29
CCDC140-202ENST00000440903 DLC1Q96QB1 1528 aa6.99□□□□□ -1.29
CCDC140-202ENST00000440903 ADGRB1O14514 1584 aa6.99□□□□□ -1.29
CCDC140-202ENST00000440903 SETD1AO15047 1707 aaKnown RBP6.98□□□□□ -1.29
CCDC140-202ENST00000440903 USP47Q96K76 1375 aa6.98□□□□□ -1.29
CCDC140-202ENST00000440903 STRCQ7RTU9 1775 aa6.98□□□□□ -1.29
CCDC140-202ENST00000440903 ASXL1Q8IXJ9 1541 aa6.98□□□□□ -1.29
CCDC140-202ENST00000440903 C14orf37Q86TY3 774 aa6.98□□□□□ -1.29
CCDC140-202ENST00000440903 POGKQ9P215 609 aa6.98□□□□□ -1.29
CCDC140-202ENST00000440903 TECPR2O15040 1411 aa6.98□□□□□ -1.29
CCDC140-202ENST00000440903 XRN1Q8IZH2 1706 aaKnown RBP6.98□□□□□ -1.29
CCDC140-202ENST00000440903 EIF4G2P78344 907 aaKnown RBP eCLIP6.97□□□□□ -1.29
CCDC140-202ENST00000440903 NBPF8Q3BBV2 869 aa6.97□□□□□ -1.29
CCDC140-202ENST00000440903 FAM135BQ49AJ0 1406 aa6.97□□□□□ -1.29
CCDC140-202ENST00000440903 ADGRD1Q6QNK2 874 aa6.97□□□□□ -1.29
CCDC140-202ENST00000440903 STK26Q9P289 416 aa6.97□□□□□ -1.29
CCDC140-202ENST00000440903 CENPJQ9HC77 1338 aaPredicted RBP6.97□□□□□ -1.29
CCDC140-202ENST00000440903 METP08581 1390 aa6.96□□□□□ -1.29
CCDC140-202ENST00000440903 ABCC11Q96J66 1382 aa6.96□□□□□ -1.29
CCDC140-202ENST00000440903 KCNA6P17658 529 aa6.96□□□□□ -1.3
CCDC140-202ENST00000440903 POTEEQ6S8J3 1075 aa6.96□□□□□ -1.3
CCDC140-202ENST00000440903 TRAK1Q9UPV9 953 aa6.96□□□□□ -1.3
CCDC140-202ENST00000440903 AMOTL2Q9Y2J4 779 aa6.96□□□□□ -1.3
CCDC140-202ENST00000440903 ARHGEF28Q8N1W1 1705 aaKnown RBP6.96□□□□□ -1.3
CCDC140-202ENST00000440903 C2orf72A6NCS6 295 aa6.95□□□□□ -1.3
CCDC140-202ENST00000440903 CDCA8Q53HL2 280 aa6.95□□□□□ -1.3
CCDC140-202ENST00000440903 TMEM132EQ6IEE7 984 aa6.95□□□□□ -1.3
CCDC140-202ENST00000440903 PCDHGA4Q9Y5G9 962 aa6.95□□□□□ -1.3
CCDC140-202ENST00000440903 QRICH2Q9H0J4 1663 aa6.95□□□□□ -1.3
CCDC140-202ENST00000440903 MSH6P52701 1360 aa6.95□□□□□ -1.3
CCDC140-202ENST00000440903 CHD2O14647 1828 aaKnown RBP6.94□□□□□ -1.3
CCDC140-202ENST00000440903 NCOA3Q9Y6Q9 1424 aa6.94□□□□□ -1.3
CCDC140-202ENST00000440903 ARHGAP33O14559 1287 aa6.94□□□□□ -1.3
CCDC140-202ENST00000440903 NBPF1Q3BBV0 1214 aa6.94□□□□□ -1.3
CCDC140-202ENST00000440903 RNF25Q96BH1 459 aaPredicted RBP6.94□□□□□ -1.3
CCDC140-202ENST00000440903 SIRT1Q96EB6 747 aa6.94□□□□□ -1.3
CCDC140-202ENST00000440903 PRAM1Q96QH2 718 aa6.94□□□□□ -1.3
CCDC140-202ENST00000440903 CDC42BPGQ6DT37 1551 aa6.94□□□□□ -1.3
CCDC140-202ENST00000440903 SBNO2Q9Y2G9 1366 aa6.94□□□□□ -1.3
CCDC140-202ENST00000440903 ADGRL3Q9HAR2 1447 aa6.93□□□□□ -1.3
CCDC140-202ENST00000440903 TMF1P82094 1093 aa6.93□□□□□ -1.3
CCDC140-202ENST00000440903 PROSER2Q86WR7 435 aaPredicted RBP6.93□□□□□ -1.3
CCDC140-202ENST00000440903 ADGRB2O60241 1585 aa6.93□□□□□ -1.3
CCDC140-202ENST00000440903 ZNF335Q9H4Z2 1342 aaPredicted RBP6.93□□□□□ -1.3
CCDC140-202ENST00000440903 ROBO2Q9HCK4 1378 aa6.93□□□□□ -1.3
CCDC140-202ENST00000440903 DCCP43146 1447 aa6.93□□□□□ -1.3
CCDC140-202ENST00000440903 PTPRUQ92729 1446 aa6.93□□□□□ -1.3
CCDC140-202ENST00000440903 SAFB2Q14151 953 aaKnown RBP eCLIP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms