RNA–Protein interactions for RNA: ENST00000440705.6

VRK2-207, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK2, Length 1,676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-207ENST00000440705 NME9Q86XW9 330 aa27.1■■□□□ 1.93
VRK2-207ENST00000440705 TTC21AQ8NDW8 1320 aa27.09■■□□□ 1.93
VRK2-207ENST00000440705 SSH2Q76I76 1423 aa27.09■■□□□ 1.93
VRK2-207ENST00000440705 ATF3P18847 181 aa27.09■■□□□ 1.93
VRK2-207ENST00000440705 SCAF1Q9H7N4 1312 aaKnown RBP27.08■■□□□ 1.93
VRK2-207ENST00000440705 MTHFSP49914 203 aa27.08■■□□□ 1.92
VRK2-207ENST00000440705 ESCO1Q5FWF5 840 aa27.08■■□□□ 1.92
VRK2-207ENST00000440705 COG3Q96JB2 828 aa27.08■■□□□ 1.92
VRK2-207ENST00000440705 ZNF335Q9H4Z2 1342 aaPredicted RBP27.07■■□□□ 1.92
VRK2-207ENST00000440705 INSRP06213 1382 aa27.07■■□□□ 1.92
VRK2-207ENST00000440705 CFAP53Q96M91 514 aa27.06■■□□□ 1.92
VRK2-207ENST00000440705 WDR43Q15061 677 aaKnown RBP eCLIP27.05■■□□□ 1.92
VRK2-207ENST00000440705 MSH6P52701 1360 aa27.05■■□□□ 1.92
VRK2-207ENST00000440705 CADPS2Q86UW7 1296 aa27.05■■□□□ 1.92
VRK2-207ENST00000440705 LRRC7Q96NW7 1537 aa27.03■■□□□ 1.92
VRK2-207ENST00000440705 C1orf167Q5SNV9 1468 aa27.02■■□□□ 1.92
VRK2-207ENST00000440705 XIRP1Q702N8 1843 aaKnown RBP27.02■■□□□ 1.92
VRK2-207ENST00000440705 ZRANB1Q9UGI0 708 aa27.01■■□□□ 1.91
VRK2-207ENST00000440705 AATKQ6ZMQ8 1374 aa27■■□□□ 1.91
VRK2-207ENST00000440705 ORAI2Q96SN7 254 aa26.99■■□□□ 1.91
VRK2-207ENST00000440705 ADAMTS8Q9UP79 889 aa26.99■■□□□ 1.91
VRK2-207ENST00000440705 MST1RQ04912 1400 aa26.99■■□□□ 1.91
VRK2-207ENST00000440705 PSME1Q06323 249 aa26.98■■□□□ 1.91
VRK2-207ENST00000440705 KIF1AQ12756 1690 aa26.98■■□□□ 1.91
VRK2-207ENST00000440705 OVOS2A0A0J9YW53 1432 aa26.98■■□□□ 1.91
VRK2-207ENST00000440705 OVOS2Q6IE36 1432 aa26.98■■□□□ 1.91
VRK2-207ENST00000440705 USP31Q70CQ4 1352 aa26.96■■□□□ 1.91
VRK2-207ENST00000440705 ZBED9Q6R2W3 1325 aa26.96■■□□□ 1.91
VRK2-207ENST00000440705 MAP2P11137 1827 aaKnown RBP26.96■■□□□ 1.91
VRK2-207ENST00000440705 BLMP54132 1417 aaPredicted RBP26.95■■□□□ 1.9
VRK2-207ENST00000440705 POLKQ9UBT6 870 aa26.95■■□□□ 1.9
VRK2-207ENST00000440705 PAK3O75914 559 aaPredicted RBP26.93■■□□□ 1.9
VRK2-207ENST00000440705 PIK3C2AO00443 1686 aa26.93■■□□□ 1.9
VRK2-207ENST00000440705 FOXO3O43524 673 aa26.92■■□□□ 1.9
VRK2-207ENST00000440705 PNPLA6Q8IY17 1366 aa26.92■■□□□ 1.9
VRK2-207ENST00000440705 ABTB2Q8N961 1025 aa26.92■■□□□ 1.9
VRK2-207ENST00000440705 SHPRHQ149N8 1683 aa26.91■■□□□ 1.9
VRK2-207ENST00000440705 SMG6Q86US8 1419 aaKnown RBP26.9■■□□□ 1.9
VRK2-207ENST00000440705 NLRP6P59044 892 aa26.9■■□□□ 1.9
VRK2-207ENST00000440705 NUDCQ9Y266 331 aa26.9■■□□□ 1.9
VRK2-207ENST00000440705 FBLN1P23142 703 aa26.89■■□□□ 1.9
VRK2-207ENST00000440705 USP54Q70EL1 1684 aa26.88■■□□□ 1.89
VRK2-207ENST00000440705 COL3A1P02461 1466 aaPredicted RBP26.88■■□□□ 1.89
VRK2-207ENST00000440705 PPM1GO15355 546 aaPredicted RBP26.88■■□□□ 1.89
VRK2-207ENST00000440705 DIAPH1O60610 1272 aaKnown RBP26.86■■□□□ 1.89
VRK2-207ENST00000440705 KRT28Q7Z3Y7 464 aa26.86■■□□□ 1.89
VRK2-207ENST00000440705 EMILIN1Q9Y6C2 1016 aa26.86■■□□□ 1.89
VRK2-207ENST00000440705 CDK12Q9NYV4 1490 aaPredicted RBP26.86■■□□□ 1.89
VRK2-207ENST00000440705 RRS1Q15050 365 aaKnown RBP26.85■■□□□ 1.89
VRK2-207ENST00000440705 SLAIN2Q9P270 581 aa26.83■■□□□ 1.89
VRK2-207ENST00000440705 NPHP3Q7Z494 1330 aa26.82■■□□□ 1.88
VRK2-207ENST00000440705 NUTM2GQ5VZR2 741 aa26.82■■□□□ 1.88
VRK2-207ENST00000440705 TRPM3Q9HCF6 1732 aaPredicted RBP26.81■■□□□ 1.88
VRK2-207ENST00000440705 MARF1Q9Y4F3 1742 aaKnown RBP26.81■■□□□ 1.88
VRK2-207ENST00000440705 U2AF1L5P0DN76 240 aaPredicted RBP26.81■■□□□ 1.88
VRK2-207ENST00000440705 U2AF1Q01081 240 aaKnown RBP eCLIP26.81■■□□□ 1.88
VRK2-207ENST00000440705 XPCQ01831 940 aaPredicted RBP26.81■■□□□ 1.88
VRK2-207ENST00000440705 U2SURPO15042 1029 aaKnown RBP26.79■■□□□ 1.88
VRK2-207ENST00000440705 CCDC146Q8IYE0 955 aa26.79■■□□□ 1.88
VRK2-207ENST00000440705 SOX12O15370 315 aa26.78■■□□□ 1.88
VRK2-207ENST00000440705 BRINP3Q76B58 766 aa26.78■■□□□ 1.88
VRK2-207ENST00000440705 RUNDC1Q96C34 613 aa26.77■■□□□ 1.88
VRK2-207ENST00000440705 SBNO1A3KN83 1393 aa26.77■■□□□ 1.88
VRK2-207ENST00000440705 SENP3-EIF4A1A0A087X0R7 540 aa26.76■■□□□ 1.87
VRK2-207ENST00000440705 NGEFQ8N5V2 710 aa26.76■■□□□ 1.87
VRK2-207ENST00000440705 KCNH5Q8NCM2 988 aa26.76■■□□□ 1.87
VRK2-207ENST00000440705 LTBP4Q8N2S1 1624 aa26.76■■□□□ 1.87
VRK2-207ENST00000440705 MAP3K19Q56UN5 1328 aa26.76■■□□□ 1.87
VRK2-207ENST00000440705 PNNQ9H307 717 aaKnown RBP26.76■■□□□ 1.87
VRK2-207ENST00000440705 KIF24Q5T7B8 1368 aa26.75■■□□□ 1.87
VRK2-207ENST00000440705 IL13P35225 146 aa26.75■■□□□ 1.87
VRK2-207ENST00000440705 SALL2Q9Y467 1007 aaPredicted RBP26.74■■□□□ 1.87
VRK2-207ENST00000440705 APAF1O14727 1248 aa26.73■■□□□ 1.87
VRK2-207ENST00000440705 LMOD2Q6P5Q4 547 aa26.73■■□□□ 1.87
VRK2-207ENST00000440705 AEBP2Q6ZN18 517 aaPredicted RBP26.73■■□□□ 1.87
VRK2-207ENST00000440705 PDE3BQ13370 1112 aa26.73■■□□□ 1.87
VRK2-207ENST00000440705 FLT4P35916 1363 aa26.72■■□□□ 1.87
VRK2-207ENST00000440705 ALS2Q96Q42 1657 aa26.72■■□□□ 1.87
VRK2-207ENST00000440705 PEAK1Q9H792 1746 aa26.72■■□□□ 1.87
VRK2-207ENST00000440705 AMPHP49418 695 aa26.72■■□□□ 1.87
VRK2-207ENST00000440705 DDX17Q92841 729 aaKnown RBP26.72■■□□□ 1.87
VRK2-207ENST00000440705 PXDNQ92626 1479 aa26.71■■□□□ 1.87
VRK2-207ENST00000440705 FCHSD2O94868 740 aa26.7■■□□□ 1.87
VRK2-207ENST00000440705 USP19O94966 1318 aa26.69■■□□□ 1.86
VRK2-207ENST00000440705 SLIT3O75094 1523 aa26.68■■□□□ 1.86
VRK2-207ENST00000440705 HSP90AB2PQ58FF8 381 aa26.68■■□□□ 1.86
VRK2-207ENST00000440705 NFAT5O94916 1531 aa26.68■■□□□ 1.86
VRK2-207ENST00000440705 GCP02774 474 aa26.67■■□□□ 1.86
VRK2-207ENST00000440705 EIF4A2Q14240 407 aaKnown RBP26.67■■□□□ 1.86
VRK2-207ENST00000440705 TNS3Q68CZ2 1445 aa26.67■■□□□ 1.86
VRK2-207ENST00000440705 TCP11L2Q8N4U5 519 aa26.66■■□□□ 1.86
VRK2-207ENST00000440705 PLEKHF1Q96S99 279 aa26.66■■□□□ 1.86
VRK2-207ENST00000440705 SPATA31A3Q5VYP0 1347 aa26.66■■□□□ 1.86
VRK2-207ENST00000440705 RTL1A6NKG5 1358 aa26.66■■□□□ 1.86
VRK2-207ENST00000440705 NCBP3Q53F19 620 aaKnown RBP26.66■■□□□ 1.86
VRK2-207ENST00000440705 ARHGEF10O15013 1369 aa26.65■■□□□ 1.86
VRK2-207ENST00000440705 SOS2Q07890 1332 aaPredicted RBP26.65■■□□□ 1.86
VRK2-207ENST00000440705 HOXC9P31274 260 aa26.64■■□□□ 1.86
VRK2-207ENST00000440705 MAPK8IP3Q9UPT6 1336 aa26.64■■□□□ 1.86
VRK2-207ENST00000440705 LTN1O94822 1766 aa26.64■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms