RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 MON2Q7Z3U7 1717 aa25.34■■□□□ 1.65
CPSF4-205ENST00000440514 C8orf37Q96NL8 207 aa25.33■■□□□ 1.65
CPSF4-205ENST00000440514 PHRF1Q9P1Y6 1649 aaKnown RBP25.32■■□□□ 1.64
CPSF4-205ENST00000440514 CD163L1Q9NR16 1453 aa25.32■■□□□ 1.64
CPSF4-205ENST00000440514 CPSF1Q10570 1443 aaKnown RBP25.31■■□□□ 1.64
CPSF4-205ENST00000440514 TMF1P82094 1093 aa25.31■■□□□ 1.64
CPSF4-205ENST00000440514 AFF2P51816 1311 aa25.3■■□□□ 1.64
CPSF4-205ENST00000440514 PIK3C2AO00443 1686 aa25.29■■□□□ 1.64
CPSF4-205ENST00000440514 HSPA5P11021 654 aaKnown RBP25.29■■□□□ 1.64
CPSF4-205ENST00000440514 HAP1P54257 671 aaPredicted RBP25.29■■□□□ 1.64
CPSF4-205ENST00000440514 TMC1Q8TDI8 760 aa25.29■■□□□ 1.64
CPSF4-205ENST00000440514 SSH2Q76I76 1423 aa25.29■■□□□ 1.64
CPSF4-205ENST00000440514 SLC24A1O60721 1099 aa25.28■■□□□ 1.64
CPSF4-205ENST00000440514 EIF4G2P78344 907 aaKnown RBP eCLIP25.28■■□□□ 1.64
CPSF4-205ENST00000440514 NUTM2GQ5VZR2 741 aa25.28■■□□□ 1.64
CPSF4-205ENST00000440514 ILDR2Q71H61 639 aa25.28■■□□□ 1.64
CPSF4-205ENST00000440514 PUS7Q96PZ0 661 aaKnown RBP25.28■■□□□ 1.64
CPSF4-205ENST00000440514 MYOM1P52179 1685 aa25.27■■□□□ 1.64
CPSF4-205ENST00000440514 BRD4O60885 1362 aaPredicted RBP25.27■■□□□ 1.64
CPSF4-205ENST00000440514 KTN1Q86UP2 1357 aaKnown RBP25.27■■□□□ 1.64
CPSF4-205ENST00000440514 POTEAQ6S8J7 498 aa25.26■■□□□ 1.63
CPSF4-205ENST00000440514 SLC12A5Q9H2X9 1139 aa25.26■■□□□ 1.63
CPSF4-205ENST00000440514 NGLY1Q96IV0 654 aa25.25■■□□□ 1.63
CPSF4-205ENST00000440514 PLCH1Q4KWH8 1693 aa25.25■■□□□ 1.63
CPSF4-205ENST00000440514 A0A1W2PP64 1363 aa25.24■■□□□ 1.63
CPSF4-205ENST00000440514 NINLQ9Y2I6 1382 aa25.24■■□□□ 1.63
CPSF4-205ENST00000440514 ABTB2Q8N961 1025 aa25.24■■□□□ 1.63
CPSF4-205ENST00000440514 ZNF692Q9BU19 519 aaPredicted RBP25.22■■□□□ 1.63
CPSF4-205ENST00000440514 TTC21BQ7Z4L5 1316 aa25.21■■□□□ 1.63
CPSF4-205ENST00000440514 ZNF772Q68DY9 489 aaPredicted RBP25.21■■□□□ 1.63
CPSF4-205ENST00000440514 USP19O94966 1318 aa25.2■■□□□ 1.62
CPSF4-205ENST00000440514 HDGFL2Q7Z4V5 671 aaPredicted RBP25.2■■□□□ 1.62
CPSF4-205ENST00000440514 SLIT2O94813 1529 aa25.19■■□□□ 1.62
CPSF4-205ENST00000440514 CDCA8Q53HL2 280 aa25.19■■□□□ 1.62
CPSF4-205ENST00000440514 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.19■■□□□ 1.62
CPSF4-205ENST00000440514 SLIT3O75094 1523 aa25.18■■□□□ 1.62
CPSF4-205ENST00000440514 TERF2IPQ9NYB0 399 aa25.18■■□□□ 1.62
CPSF4-205ENST00000440514 EDC4Q6P2E9 1401 aaKnown RBP25.18■■□□□ 1.62
CPSF4-205ENST00000440514 COL14A1Q05707 1796 aaKnown RBP25.18■■□□□ 1.62
CPSF4-205ENST00000440514 TTC21AQ8NDW8 1320 aa25.17■■□□□ 1.62
CPSF4-205ENST00000440514 FNBP4Q8N3X1 1017 aaPredicted RBP25.17■■□□□ 1.62
CPSF4-205ENST00000440514 USP21Q9UK80 565 aa25.17■■□□□ 1.62
CPSF4-205ENST00000440514 NWD2Q9ULI1 1742 aa25.17■■□□□ 1.62
CPSF4-205ENST00000440514 BCL9LQ86UU0 1499 aa25.16■■□□□ 1.62
CPSF4-205ENST00000440514 NLRP13Q86W25 1043 aa25.16■■□□□ 1.62
CPSF4-205ENST00000440514 USP54Q70EL1 1684 aa25.16■■□□□ 1.62
CPSF4-205ENST00000440514 ANKRD36BQ8N2N9 1353 aa25.16■■□□□ 1.62
CPSF4-205ENST00000440514 NLRP6P59044 892 aa25.15■■□□□ 1.62
CPSF4-205ENST00000440514 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.15■■□□□ 1.62
CPSF4-205ENST00000440514 NRAPQ86VF7 1730 aa25.15■■□□□ 1.62
CPSF4-205ENST00000440514 KIAA0232Q92628 1395 aa25.14■■□□□ 1.61
CPSF4-205ENST00000440514 POLR3GLQ9BT43 218 aa25.13■■□□□ 1.61
CPSF4-205ENST00000440514 ATRNO75882 1429 aa25.12■■□□□ 1.61
CPSF4-205ENST00000440514 FAM83GA6ND36 823 aa25.12■■□□□ 1.61
CPSF4-205ENST00000440514 NME9Q86XW9 330 aa25.12■■□□□ 1.61
CPSF4-205ENST00000440514 ZC3H6P61129 1189 aaKnown RBP25.11■■□□□ 1.61
CPSF4-205ENST00000440514 PRDM11Q9NQV5 511 aa25.11■■□□□ 1.61
CPSF4-205ENST00000440514 ZRANB1Q9UGI0 708 aa25.11■■□□□ 1.61
CPSF4-205ENST00000440514 QTRT2Q9H974 415 aaKnown RBP25.1■■□□□ 1.61
CPSF4-205ENST00000440514 GCP02774 474 aa25.09■■□□□ 1.61
CPSF4-205ENST00000440514 LMO7Q8WWI1 1683 aa25.08■■□□□ 1.61
CPSF4-205ENST00000440514 C11orf95C9JLR9 678 aaPredicted RBP25.08■■□□□ 1.61
CPSF4-205ENST00000440514 CHRNA2Q15822 529 aa25.08■■□□□ 1.61
CPSF4-205ENST00000440514 NFAT5O94916 1531 aa25.07■■□□□ 1.6
CPSF4-205ENST00000440514 CPDO75976 1380 aa25.07■■□□□ 1.6
CPSF4-205ENST00000440514 USP31Q70CQ4 1352 aa25.07■■□□□ 1.6
CPSF4-205ENST00000440514 UNC5CLQ8IV45 518 aa25.07■■□□□ 1.6
CPSF4-205ENST00000440514 TRPC5Q9UL62 973 aaPredicted RBP25.07■■□□□ 1.6
CPSF4-205ENST00000440514 OVOS2A0A0J9YW53 1432 aa25.06■■□□□ 1.6
CPSF4-205ENST00000440514 OVOS2Q6IE36 1432 aa25.06■■□□□ 1.6
CPSF4-205ENST00000440514 BTG4Q9NY30 223 aa25.06■■□□□ 1.6
CPSF4-205ENST00000440514 KIF20BQ96Q89 1820 aa25.06■■□□□ 1.6
CPSF4-205ENST00000440514 SOX12O15370 315 aa25.05■■□□□ 1.6
CPSF4-205ENST00000440514 RXRBP28702 533 aa25.05■■□□□ 1.6
CPSF4-205ENST00000440514 GLI3P10071 1580 aa25.05■■□□□ 1.6
CPSF4-205ENST00000440514 RGS12O14924 1447 aa25.03■■□□□ 1.6
CPSF4-205ENST00000440514 NSD3Q9BZ95 1437 aa25.03■■□□□ 1.6
CPSF4-205ENST00000440514 ZBTB7CA1YPR0 619 aa25.03■■□□□ 1.6
CPSF4-205ENST00000440514 RBM6P78332 1123 aaKnown RBP25.03■■□□□ 1.6
CPSF4-205ENST00000440514 CDK12Q9NYV4 1490 aaPredicted RBP25.02■■□□□ 1.6
CPSF4-205ENST00000440514 CAMTA1Q9Y6Y1 1673 aa25.02■■□□□ 1.6
CPSF4-205ENST00000440514 CARD14Q9BXL6 1004 aa25.01■■□□□ 1.59
CPSF4-205ENST00000440514 KIF7Q2M1P5 1343 aa25.01■■□□□ 1.59
CPSF4-205ENST00000440514 COL18A1P39060 1754 aa25■■□□□ 1.59
CPSF4-205ENST00000440514 LTN1O94822 1766 aa24.99■■□□□ 1.59
CPSF4-205ENST00000440514 VPS72Q15906 364 aa24.99■■□□□ 1.59
CPSF4-205ENST00000440514 KCNH5Q8NCM2 988 aa24.99■■□□□ 1.59
CPSF4-205ENST00000440514 GJD4Q96KN9 370 aaPredicted RBP24.98■■□□□ 1.59
CPSF4-205ENST00000440514 CCDC9Q9Y3X0 531 aaKnown RBP24.97■■□□□ 1.59
CPSF4-205ENST00000440514 COL5A2P05997 1499 aaPredicted RBP24.96■■□□□ 1.59
CPSF4-205ENST00000440514 RGPD5Q99666 1765 aa24.95■■□□□ 1.59
CPSF4-205ENST00000440514 AATKQ6ZMQ8 1374 aa24.95■■□□□ 1.59
CPSF4-205ENST00000440514 ARHGEF25Q86VW2 580 aa24.95■■□□□ 1.58
CPSF4-205ENST00000440514 GGNBP2Q9H3C7 697 aa24.95■■□□□ 1.58
CPSF4-205ENST00000440514 STRN4Q9NRL3 753 aa24.95■■□□□ 1.58
CPSF4-205ENST00000440514 FYB1O15117 783 aa24.94■■□□□ 1.58
CPSF4-205ENST00000440514 COG3Q96JB2 828 aa24.94■■□□□ 1.58
CPSF4-205ENST00000440514 ABCC6O95255 1503 aa24.93■■□□□ 1.58
CPSF4-205ENST00000440514 CCDC7Q96M83 1385 aa24.93■■□□□ 1.58
CPSF4-205ENST00000440514 SOCS7O14512 581 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms