RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 BLMP54132 1417 aaPredicted RBP30.02■■■□□ 2.4
CPNE1-219ENST00000440240 ATP7BP35670 1465 aa30.01■■■□□ 2.4
CPNE1-219ENST00000440240 NBPF1Q3BBV0 1214 aa30.01■■■□□ 2.39
CPNE1-219ENST00000440240 KIAA1210Q9ULL0 1709 aa29.99■■■□□ 2.39
CPNE1-219ENST00000440240 SF3B2Q13435 895 aaKnown RBP29.99■■■□□ 2.39
CPNE1-219ENST00000440240 SRCAPQ6ZRS2 3230 aa29.98■■■□□ 2.39
CPNE1-219ENST00000440240 A0A0G2JS52 829 aa29.98■■■□□ 2.39
CPNE1-219ENST00000440240 MYT1Q01538 1121 aa29.98■■■□□ 2.39
CPNE1-219ENST00000440240 PRDM11Q9NQV5 511 aa29.98■■■□□ 2.39
CPNE1-219ENST00000440240 PLEKHG3A1L390 1219 aa29.97■■■□□ 2.39
CPNE1-219ENST00000440240 FAM98CQ17RN3 349 aaKnown RBP29.97■■■□□ 2.39
CPNE1-219ENST00000440240 NBPF8Q3BBV2 869 aa29.97■■■□□ 2.39
CPNE1-219ENST00000440240 ACEP12821 1306 aa29.96■■■□□ 2.39
CPNE1-219ENST00000440240 ITSN1Q15811 1721 aa29.96■■■□□ 2.39
CPNE1-219ENST00000440240 COL14A1Q05707 1796 aaKnown RBP29.95■■■□□ 2.39
CPNE1-219ENST00000440240 POLR3AO14802 1390 aaPredicted RBP29.95■■■□□ 2.39
CPNE1-219ENST00000440240 BRWD3Q6RI45 1802 aa29.94■■■□□ 2.38
CPNE1-219ENST00000440240 SPATA31A5Q5VU36 1347 aa29.93■■■□□ 2.38
CPNE1-219ENST00000440240 SPATA31A7Q8IWB4 1347 aa29.93■■■□□ 2.38
CPNE1-219ENST00000440240 CENPJQ9HC77 1338 aaPredicted RBP29.92■■■□□ 2.38
CPNE1-219ENST00000440240 SRPK2P78362 688 aaKnown RBP29.91■■■□□ 2.38
CPNE1-219ENST00000440240 NRAPQ86VF7 1730 aa29.9■■■□□ 2.38
CPNE1-219ENST00000440240 NUTM2GQ5VZR2 741 aa29.89■■■□□ 2.38
CPNE1-219ENST00000440240 DEFB132Q7Z7B7 95 aa29.89■■■□□ 2.38
CPNE1-219ENST00000440240 KIAA0232Q92628 1395 aa29.89■■■□□ 2.37
CPNE1-219ENST00000440240 ABTB2Q8N961 1025 aa29.88■■■□□ 2.37
CPNE1-219ENST00000440240 L3MBTL2Q969R5 705 aa29.88■■■□□ 2.37
CPNE1-219ENST00000440240 ZC3H6P61129 1189 aaKnown RBP29.87■■■□□ 2.37
CPNE1-219ENST00000440240 CRYBG1Q9Y4K1 1723 aa29.86■■■□□ 2.37
CPNE1-219ENST00000440240 CHRNA2Q15822 529 aa29.85■■■□□ 2.37
CPNE1-219ENST00000440240 CABP2Q9NPB3 220 aa29.84■■■□□ 2.37
CPNE1-219ENST00000440240 TOPAZ1Q8N9V7 1692 aa29.82■■■□□ 2.36
CPNE1-219ENST00000440240 SPATA31A1Q5TZJ5 1347 aa29.82■■■□□ 2.36
CPNE1-219ENST00000440240 BAG6P46379 1132 aa29.82■■■□□ 2.36
CPNE1-219ENST00000440240 NLRP13Q86W25 1043 aa29.82■■■□□ 2.36
CPNE1-219ENST00000440240 STRN4Q9NRL3 753 aa29.82■■■□□ 2.36
CPNE1-219ENST00000440240 PPIP5K1Q6PFW1 1433 aa29.81■■■□□ 2.36
CPNE1-219ENST00000440240 EVA1CP58658 441 aa29.81■■■□□ 2.36
CPNE1-219ENST00000440240 SIN3AQ96ST3 1273 aa29.8■■■□□ 2.36
CPNE1-219ENST00000440240 BRD4O60885 1362 aaPredicted RBP29.79■■■□□ 2.36
CPNE1-219ENST00000440240 CABP1Q9NZU7 370 aa29.77■■■□□ 2.36
CPNE1-219ENST00000440240 USP19O94966 1318 aa29.76■■■□□ 2.36
CPNE1-219ENST00000440240 PHRF1Q9P1Y6 1649 aaKnown RBP29.76■■■□□ 2.35
CPNE1-219ENST00000440240 GCP02774 474 aa29.76■■■□□ 2.35
CPNE1-219ENST00000440240 NEUROD1Q13562 356 aa29.76■■■□□ 2.35
CPNE1-219ENST00000440240 CPDO75976 1380 aa29.76■■■□□ 2.35
CPNE1-219ENST00000440240 FAM182BQ5T319 152 aa29.75■■■□□ 2.35
CPNE1-219ENST00000440240 EVC2Q86UK5 1308 aa29.74■■■□□ 2.35
CPNE1-219ENST00000440240 USP35Q9P2H5 1018 aa29.73■■■□□ 2.35
CPNE1-219ENST00000440240 BARGINQ6ZT62 677 aa29.72■■■□□ 2.35
CPNE1-219ENST00000440240 THSD7AQ9UPZ6 1657 aa29.71■■■□□ 2.35
CPNE1-219ENST00000440240 SSH2Q76I76 1423 aa29.71■■■□□ 2.35
CPNE1-219ENST00000440240 FAM196AQ6ZSG2 479 aa29.7■■■□□ 2.35
CPNE1-219ENST00000440240 QRICH2Q9H0J4 1663 aa29.69■■■□□ 2.34
CPNE1-219ENST00000440240 ROCK2O75116 1388 aaKnown RBP29.69■■■□□ 2.34
CPNE1-219ENST00000440240 NLRP6P59044 892 aa29.69■■■□□ 2.34
CPNE1-219ENST00000440240 EN1Q05925 392 aaPredicted RBP29.68■■■□□ 2.34
CPNE1-219ENST00000440240 LARP1Q6PKG0 1096 aaKnown RBP29.68■■■□□ 2.34
CPNE1-219ENST00000440240 TCP11L2Q8N4U5 519 aa29.68■■■□□ 2.34
CPNE1-219ENST00000440240 USP6P35125 1406 aa29.68■■■□□ 2.34
CPNE1-219ENST00000440240 NRKQ7Z2Y5 1582 aa29.68■■■□□ 2.34
CPNE1-219ENST00000440240 CAMTA1Q9Y6Y1 1673 aa29.67■■■□□ 2.34
CPNE1-219ENST00000440240 PDE3BQ13370 1112 aa29.67■■■□□ 2.34
CPNE1-219ENST00000440240 ZNF692Q9BU19 519 aaPredicted RBP29.67■■■□□ 2.34
CPNE1-219ENST00000440240 THRAP3Q9Y2W1 955 aaKnown RBP29.66■■■□□ 2.34
CPNE1-219ENST00000440240 TRPM1Q7Z4N2 1603 aa29.63■■■□□ 2.33
CPNE1-219ENST00000440240 TRIM37O94972 964 aa29.62■■■□□ 2.33
CPNE1-219ENST00000440240 RGPD1P0DJD0 1748 aa29.62■■■□□ 2.33
CPNE1-219ENST00000440240 DISP2A7MBM2 1401 aa29.62■■■□□ 2.33
CPNE1-219ENST00000440240 LMO7Q8WWI1 1683 aa29.6■■■□□ 2.33
CPNE1-219ENST00000440240 ZBTB7CA1YPR0 619 aa29.59■■■□□ 2.33
CPNE1-219ENST00000440240 AATKQ6ZMQ8 1374 aa29.59■■■□□ 2.33
CPNE1-219ENST00000440240 PSDA5PKW4 1024 aaPredicted RBP29.58■■■□□ 2.33
CPNE1-219ENST00000440240 COL5A2P05997 1499 aaPredicted RBP29.57■■■□□ 2.32
CPNE1-219ENST00000440240 TTC21BQ7Z4L5 1316 aa29.56■■■□□ 2.32
CPNE1-219ENST00000440240 APBA3O96018 575 aa29.56■■■□□ 2.32
CPNE1-219ENST00000440240 EZH2Q15910 746 aaKnown RBP29.56■■■□□ 2.32
CPNE1-219ENST00000440240 C11orf95C9JLR9 678 aaPredicted RBP29.55■■■□□ 2.32
CPNE1-219ENST00000440240 KCNH5Q8NCM2 988 aa29.55■■■□□ 2.32
CPNE1-219ENST00000440240 CAMKK2Q96RR4 588 aa29.55■■■□□ 2.32
CPNE1-219ENST00000440240 CRB1P82279 1406 aa29.54■■■□□ 2.32
CPNE1-219ENST00000440240 SLIT3O75094 1523 aa29.54■■■□□ 2.32
CPNE1-219ENST00000440240 TTC21AQ8NDW8 1320 aa29.53■■■□□ 2.32
CPNE1-219ENST00000440240 CARD11Q9BXL7 1154 aa29.52■■■□□ 2.32
CPNE1-219ENST00000440240 PARD3Q8TEW0 1356 aa29.52■■■□□ 2.32
CPNE1-219ENST00000440240 TOM1L2Q6ZVM7 507 aa29.51■■■□□ 2.31
CPNE1-219ENST00000440240 R3HDM1Q15032 1099 aaKnown RBP29.5■■■□□ 2.31
CPNE1-219ENST00000440240 TNS1Q9HBL0 1735 aaKnown RBP29.49■■■□□ 2.31
CPNE1-219ENST00000440240 CPSF1Q10570 1443 aaKnown RBP29.49■■■□□ 2.31
CPNE1-219ENST00000440240 ARHGEF25Q86VW2 580 aa29.49■■■□□ 2.31
CPNE1-219ENST00000440240 KTN1Q86UP2 1357 aaKnown RBP29.49■■■□□ 2.31
CPNE1-219ENST00000440240 SBNO2Q9Y2G9 1366 aa29.49■■■□□ 2.31
CPNE1-219ENST00000440240 AXIN2Q9Y2T1 843 aa29.48■■■□□ 2.31
CPNE1-219ENST00000440240 PIK3C2AO00443 1686 aa29.47■■■□□ 2.31
CPNE1-219ENST00000440240 WDR17Q8IZU2 1322 aa29.46■■■□□ 2.31
CPNE1-219ENST00000440240 DDB1Q16531 1140 aa29.45■■■□□ 2.31
CPNE1-219ENST00000440240 LRP5O75197 1615 aa29.45■■■□□ 2.3
CPNE1-219ENST00000440240 TONSLQ96HA7 1378 aa29.44■■■□□ 2.3
CPNE1-219ENST00000440240 CDCA7Q9BWT1 371 aaPredicted RBP29.44■■■□□ 2.3
CPNE1-219ENST00000440240 SOX12O15370 315 aa29.43■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms