RNA–Protein interactions for RNA: ENST00000440179.5

SMC2-204, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 3

Gene SMC2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-204ENST00000440179 TRPM3Q9HCF6 1732 aaPredicted RBP20.47■□□□□ 0.87
SMC2-204ENST00000440179 SPATA31A5Q5VU36 1347 aa20.46■□□□□ 0.87
SMC2-204ENST00000440179 SPATA31A7Q8IWB4 1347 aa20.46■□□□□ 0.87
SMC2-204ENST00000440179 COL14A1Q05707 1796 aaKnown RBP20.46■□□□□ 0.87
SMC2-204ENST00000440179 PMFBP1Q8TBY8 1022 aa20.45■□□□□ 0.86
SMC2-204ENST00000440179 C14orf93Q9H972 538 aaKnown RBP20.45■□□□□ 0.86
SMC2-204ENST00000440179 ANKARQ7Z5J8 1434 aa20.44■□□□□ 0.86
SMC2-204ENST00000440179 EZH2Q15910 746 aaKnown RBP20.44■□□□□ 0.86
SMC2-204ENST00000440179 ALS2Q96Q42 1657 aa20.44■□□□□ 0.86
SMC2-204ENST00000440179 SAFB2Q14151 953 aaKnown RBP eCLIP20.43■□□□□ 0.86
SMC2-204ENST00000440179 PRAM1Q96QH2 718 aa20.43■□□□□ 0.86
SMC2-204ENST00000440179 CAMKK2Q96RR4 588 aa20.42■□□□□ 0.86
SMC2-204ENST00000440179 CRYBG1Q9Y4K1 1723 aa20.41■□□□□ 0.86
SMC2-204ENST00000440179 ADGRB2O60241 1585 aa20.4■□□□□ 0.86
SMC2-204ENST00000440179 CFAP70Q5T0N1 1121 aa20.4■□□□□ 0.86
SMC2-204ENST00000440179 DHX57Q6P158 1386 aaKnown RBP20.39■□□□□ 0.85
SMC2-204ENST00000440179 DLC1Q96QB1 1528 aa20.37■□□□□ 0.85
SMC2-204ENST00000440179 ACIN1Q9UKV3 1341 aaKnown RBP20.37■□□□□ 0.85
SMC2-204ENST00000440179 TRIM37O94972 964 aa20.37■□□□□ 0.85
SMC2-204ENST00000440179 SPATA31A1Q5TZJ5 1347 aa20.36■□□□□ 0.85
SMC2-204ENST00000440179 PRR36Q9H6K5 1346 aa20.36■□□□□ 0.85
SMC2-204ENST00000440179 YY1P25490 414 aa20.36■□□□□ 0.85
SMC2-204ENST00000440179 CACNB1Q02641 598 aaPredicted RBP20.36■□□□□ 0.85
SMC2-204ENST00000440179 GPRASP1Q5JY77 1395 aa20.35■□□□□ 0.85
SMC2-204ENST00000440179 MPHOSPH9Q99550 1183 aa20.35■□□□□ 0.85
SMC2-204ENST00000440179 PARD3Q8TEW0 1356 aa20.34■□□□□ 0.85
SMC2-204ENST00000440179 RREB1Q92766 1687 aa20.34■□□□□ 0.85
SMC2-204ENST00000440179 FAM196AQ6ZSG2 479 aa20.33■□□□□ 0.85
SMC2-204ENST00000440179 PRDM11Q9NQV5 511 aa20.33■□□□□ 0.85
SMC2-204ENST00000440179 POGKQ9P215 609 aa20.33■□□□□ 0.85
SMC2-204ENST00000440179 APBA3O96018 575 aa20.32■□□□□ 0.84
SMC2-204ENST00000440179 HIRIP3Q9BW71 556 aaPredicted RBP20.32■□□□□ 0.84
SMC2-204ENST00000440179 ADGRB1O14514 1584 aa20.32■□□□□ 0.84
SMC2-204ENST00000440179 NUP188Q5SRE5 1749 aa20.31■□□□□ 0.84
SMC2-204ENST00000440179 TULP4Q9NRJ4 1543 aa20.31■□□□□ 0.84
SMC2-204ENST00000440179 KIAA0232Q92628 1395 aa20.31■□□□□ 0.84
SMC2-204ENST00000440179 UTRNP46939 3433 aa20.3■□□□□ 0.84
SMC2-204ENST00000440179 CHRNA2Q15822 529 aa20.29■□□□□ 0.84
SMC2-204ENST00000440179 EIF3AQ14152 1382 aaKnown RBP20.28■□□□□ 0.84
SMC2-204ENST00000440179 MINK1Q8N4C8 1332 aaPredicted RBP20.27■□□□□ 0.84
SMC2-204ENST00000440179 C1QBPQ07021 282 aaKnown RBP20.27■□□□□ 0.84
SMC2-204ENST00000440179 PAK3O75914 559 aaPredicted RBP20.26■□□□□ 0.83
SMC2-204ENST00000440179 STRN4Q9NRL3 753 aa20.26■□□□□ 0.83
SMC2-204ENST00000440179 PHRF1Q9P1Y6 1649 aaKnown RBP20.26■□□□□ 0.83
SMC2-204ENST00000440179 WASLO00401 505 aaPredicted RBP20.25■□□□□ 0.83
SMC2-204ENST00000440179 NGDNQ8NEJ9 315 aaKnown RBP20.25■□□□□ 0.83
SMC2-204ENST00000440179 TRAK1Q9UPV9 953 aa20.25■□□□□ 0.83
SMC2-204ENST00000440179 BARGINQ6ZT62 677 aa20.24■□□□□ 0.83
SMC2-204ENST00000440179 SSH2Q76I76 1423 aa20.24■□□□□ 0.83
SMC2-204ENST00000440179 USP35Q9P2H5 1018 aa20.23■□□□□ 0.83
SMC2-204ENST00000440179 ZC3H6P61129 1189 aaKnown RBP20.22■□□□□ 0.83
SMC2-204ENST00000440179 NBPF8Q3BBV2 869 aa20.22■□□□□ 0.83
SMC2-204ENST00000440179 NBPF14Q5TI25 921 aa20.22■□□□□ 0.83
SMC2-204ENST00000440179 SPON1Q9HCB6 807 aa20.22■□□□□ 0.83
SMC2-204ENST00000440179 ATP7BP35670 1465 aa20.22■□□□□ 0.83
SMC2-204ENST00000440179 NINLQ9Y2I6 1382 aa20.21■□□□□ 0.83
SMC2-204ENST00000440179 PDE3BQ13370 1112 aa20.21■□□□□ 0.83
SMC2-204ENST00000440179 KCNQ2O43526 872 aa20.2■□□□□ 0.82
SMC2-204ENST00000440179 PPP1R1BQ9UD71 204 aaPredicted RBP20.2■□□□□ 0.82
SMC2-204ENST00000440179 CAMTA1Q9Y6Y1 1673 aa20.19■□□□□ 0.82
SMC2-204ENST00000440179 NUTM2GQ5VZR2 741 aa20.19■□□□□ 0.82
SMC2-204ENST00000440179 LARP1Q6PKG0 1096 aaKnown RBP20.18■□□□□ 0.82
SMC2-204ENST00000440179 NRKQ7Z2Y5 1582 aa20.17■□□□□ 0.82
SMC2-204ENST00000440179 LMO7Q8WWI1 1683 aa20.17■□□□□ 0.82
SMC2-204ENST00000440179 ITSN1Q15811 1721 aa20.17■□□□□ 0.82
SMC2-204ENST00000440179 TCP11L2Q8N4U5 519 aa20.17■□□□□ 0.82
SMC2-204ENST00000440179 NUDT16Q96DE0 195 aaKnown RBP20.16■□□□□ 0.82
SMC2-204ENST00000440179 EVA1CP58658 441 aa20.15■□□□□ 0.82
SMC2-204ENST00000440179 PARP4Q9UKK3 1724 aaKnown RBP20.14■□□□□ 0.81
SMC2-204ENST00000440179 CPDO75976 1380 aa20.14■□□□□ 0.81
SMC2-204ENST00000440179 POLR3AO14802 1390 aaPredicted RBP20.13■□□□□ 0.81
SMC2-204ENST00000440179 ANO8Q9HCE9 1232 aaPredicted RBP20.13■□□□□ 0.81
SMC2-204ENST00000440179 CASZ1Q86V15 1759 aa20.13■□□□□ 0.81
SMC2-204ENST00000440179 PEAK1Q9H792 1746 aa20.13■□□□□ 0.81
SMC2-204ENST00000440179 ARHGEF28Q8N1W1 1705 aaKnown RBP20.12■□□□□ 0.81
SMC2-204ENST00000440179 RGPD3A6NKT7 1758 aaPredicted RBP20.11■□□□□ 0.81
SMC2-204ENST00000440179 RGPD4Q7Z3J3 1758 aa20.11■□□□□ 0.81
SMC2-204ENST00000440179 USP19O94966 1318 aa20.11■□□□□ 0.81
SMC2-204ENST00000440179 TOPAZ1Q8N9V7 1692 aa20.11■□□□□ 0.81
SMC2-204ENST00000440179 THRAP3Q9Y2W1 955 aaKnown RBP20.11■□□□□ 0.81
SMC2-204ENST00000440179 ACEP12821 1306 aa20.1■□□□□ 0.81
SMC2-204ENST00000440179 SLC4A2P04920 1241 aa20.09■□□□□ 0.81
SMC2-204ENST00000440179 PDGFDQ9GZP0 370 aaPredicted RBP20.09■□□□□ 0.81
SMC2-204ENST00000440179 COL5A2P05997 1499 aaPredicted RBP20.09■□□□□ 0.81
SMC2-204ENST00000440179 KDM2AQ9Y2K7 1162 aa20.08■□□□□ 0.81
SMC2-204ENST00000440179 OVOS2A0A0G2JMS6 1433 aa20.08■□□□□ 0.8
SMC2-204ENST00000440179 OVOS2A0A0J9YW53 1432 aa20.08■□□□□ 0.8
SMC2-204ENST00000440179 OVOS2Q6IE36 1432 aa20.08■□□□□ 0.8
SMC2-204ENST00000440179 SBF2Q86WG5 1849 aa20.07■□□□□ 0.8
SMC2-204ENST00000440179 PLSCR1O15162 318 aa20.07■□□□□ 0.8
SMC2-204ENST00000440179 PTF1AQ7RTS3 328 aa20.07■□□□□ 0.8
SMC2-204ENST00000440179 ZNF784Q8NCA9 323 aaPredicted RBP20.07■□□□□ 0.8
SMC2-204ENST00000440179 CDK19Q9BWU1 502 aa20.07■□□□□ 0.8
SMC2-204ENST00000440179 C11orf95C9JLR9 678 aaPredicted RBP20.06■□□□□ 0.8
SMC2-204ENST00000440179 ABTB2Q8N961 1025 aa20.06■□□□□ 0.8
SMC2-204ENST00000440179 MYOM1P52179 1685 aa20.06■□□□□ 0.8
SMC2-204ENST00000440179 LRRC37A3O60309 1634 aa20.05■□□□□ 0.8
SMC2-204ENST00000440179 PLEKHG3A1L390 1219 aa20.05■□□□□ 0.8
SMC2-204ENST00000440179 DCAF11Q8TEB1 546 aa20.05■□□□□ 0.8
SMC2-204ENST00000440179 CRB1P82279 1406 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms