RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 AXIN1O15169 862 aa6.93□□□□□ -1.3
HMGB3P11-201ENST00000440127 VARSP26640 1264 aaKnown RBP6.93□□□□□ -1.3
HMGB3P11-201ENST00000440127 ZNF511Q8NB15 262 aa6.93□□□□□ -1.3
HMGB3P11-201ENST00000440127 CABLES1Q8TDN4 633 aa6.93□□□□□ -1.3
HMGB3P11-201ENST00000440127 WASF2Q9Y6W5 498 aa6.93□□□□□ -1.3
HMGB3P11-201ENST00000440127 ST8SIA5O15466 376 aa6.92□□□□□ -1.3
HMGB3P11-201ENST00000440127 SMCPP49901 116 aaPredicted RBP6.92□□□□□ -1.3
HMGB3P11-201ENST00000440127 FAM174AQ8TBP5 190 aa6.92□□□□□ -1.3
HMGB3P11-201ENST00000440127 GPBP1L1Q9HC44 474 aaPredicted RBP6.92□□□□□ -1.3
HMGB3P11-201ENST00000440127 POLR3EQ9NVU0 708 aa6.92□□□□□ -1.3
HMGB3P11-201ENST00000440127 ALDH1A1P00352 501 aa6.91□□□□□ -1.3
HMGB3P11-201ENST00000440127 SKOR1P84550 965 aa6.91□□□□□ -1.3
HMGB3P11-201ENST00000440127 NEUROD2Q15784 382 aa6.91□□□□□ -1.3
HMGB3P11-201ENST00000440127 QPCTQ16769 361 aa6.91□□□□□ -1.3
HMGB3P11-201ENST00000440127 PTCRAQ6ISU1 281 aaPredicted RBP6.91□□□□□ -1.3
HMGB3P11-201ENST00000440127 GPKOWQ92917 476 aaPredicted RBP eCLIP6.91□□□□□ -1.3
HMGB3P11-201ENST00000440127 GOPCQ9HD26 462 aa6.91□□□□□ -1.3
HMGB3P11-201ENST00000440127 F12P00748 615 aaPredicted RBP6.9□□□□□ -1.3
HMGB3P11-201ENST00000440127 SH3BP2P78314 561 aa6.9□□□□□ -1.3
HMGB3P11-201ENST00000440127 AGERQ15109 404 aa6.9□□□□□ -1.3
HMGB3P11-201ENST00000440127 LINC01559Q495D7 138 aa6.9□□□□□ -1.3
HMGB3P11-201ENST00000440127 BPHLQ86WA6 291 aaPredicted RBP6.9□□□□□ -1.3
HMGB3P11-201ENST00000440127 BAP1Q92560 729 aa6.9□□□□□ -1.3
HMGB3P11-201ENST00000440127 SMPD1P17405 629 aa6.89□□□□□ -1.31
HMGB3P11-201ENST00000440127 MPNDQ8N594 471 aa6.89□□□□□ -1.31
HMGB3P11-201ENST00000440127 PCMTD1Q96MG8 357 aaPredicted RBP6.89□□□□□ -1.31
HMGB3P11-201ENST00000440127 FAM117AQ9C073 453 aa6.89□□□□□ -1.31
HMGB3P11-201ENST00000440127 AAASQ9NRG9 546 aa6.89□□□□□ -1.31
HMGB3P11-201ENST00000440127 ZC3H4Q9UPT8 1303 aaKnown RBP6.88□□□□□ -1.31
HMGB3P11-201ENST00000440127 TREML4Q6UXN2 200 aa6.88□□□□□ -1.31
HMGB3P11-201ENST00000440127 SENP2Q9HC62 589 aa6.88□□□□□ -1.31
HMGB3P11-201ENST00000440127 MAP10Q9P2G4 905 aa6.88□□□□□ -1.31
HMGB3P11-201ENST00000440127 PPP2R2DQ66LE6 453 aa6.87□□□□□ -1.31
HMGB3P11-201ENST00000440127 J3QL48 77 aa6.86□□□□□ -1.31
HMGB3P11-201ENST00000440127 RTL5Q5HYW3 569 aaPredicted RBP6.86□□□□□ -1.31
HMGB3P11-201ENST00000440127 KIFC2Q96AC6 838 aa6.86□□□□□ -1.31
HMGB3P11-201ENST00000440127 SIAH2O43255 324 aa6.85□□□□□ -1.31
HMGB3P11-201ENST00000440127 TRIM52Q96A61 297 aa6.85□□□□□ -1.31
HMGB3P11-201ENST00000440127 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.85□□□□□ -1.31
HMGB3P11-201ENST00000440127 APBB1O00213 710 aa6.84□□□□□ -1.31
HMGB3P11-201ENST00000440127 PER1O15534 1290 aaPredicted RBP6.84□□□□□ -1.31
HMGB3P11-201ENST00000440127 TPRNQ4KMQ1 711 aa6.84□□□□□ -1.31
HMGB3P11-201ENST00000440127 CDV3Q9UKY7 258 aaKnown RBP6.84□□□□□ -1.31
HMGB3P11-201ENST00000440127 AP1G2O75843 785 aa6.83□□□□□ -1.32
HMGB3P11-201ENST00000440127 ADH1CP00326 375 aa6.83□□□□□ -1.32
HMGB3P11-201ENST00000440127 NR5A1Q13285 461 aa6.83□□□□□ -1.32
HMGB3P11-201ENST00000440127 TMEM259Q4ZIN3 620 aa6.83□□□□□ -1.32
HMGB3P11-201ENST00000440127 DACH1Q9UI36 760 aa6.83□□□□□ -1.32
HMGB3P11-201ENST00000440127 TLL2Q9Y6L7 1015 aa6.83□□□□□ -1.32
HMGB3P11-201ENST00000440127 C11orf95C9JLR9 678 aaPredicted RBP6.82□□□□□ -1.32
HMGB3P11-201ENST00000440127 CAPN5O15484 640 aaPredicted RBP6.82□□□□□ -1.32
HMGB3P11-201ENST00000440127 HPS1Q92902 700 aa6.82□□□□□ -1.32
HMGB3P11-201ENST00000440127 CDK15Q96Q40 435 aa6.82□□□□□ -1.32
HMGB3P11-201ENST00000440127 ATP13A2Q9NQ11 1180 aa6.82□□□□□ -1.32
HMGB3P11-201ENST00000440127 FKBPLQ9UIM3 349 aa6.82□□□□□ -1.32
HMGB3P11-201ENST00000440127 GPSM3Q9Y4H4 160 aa6.82□□□□□ -1.32
HMGB3P11-201ENST00000440127 MAP4K5Q9Y4K4 846 aa6.82□□□□□ -1.32
HMGB3P11-201ENST00000440127 WFS1O76024 890 aa6.81□□□□□ -1.32
HMGB3P11-201ENST00000440127 PTK2Q05397 1052 aa6.81□□□□□ -1.32
HMGB3P11-201ENST00000440127 CTDSPL2Q05D32 466 aa6.81□□□□□ -1.32
HMGB3P11-201ENST00000440127 NNTQ13423 1086 aa6.81□□□□□ -1.32
HMGB3P11-201ENST00000440127 ARID5BQ14865 1188 aa6.81□□□□□ -1.32
HMGB3P11-201ENST00000440127 PDXDC2PQ6P474 469 aa6.81□□□□□ -1.32
HMGB3P11-201ENST00000440127 TRMT44Q8IYL2 757 aaKnown RBP6.81□□□□□ -1.32
HMGB3P11-201ENST00000440127 PROCA1Q8NCQ7 364 aaPredicted RBP6.81□□□□□ -1.32
HMGB3P11-201ENST00000440127 ZNF592Q92610 1267 aa6.81□□□□□ -1.32
HMGB3P11-201ENST00000440127 FOXJ1Q92949 421 aa6.81□□□□□ -1.32
HMGB3P11-201ENST00000440127 GMPR2Q9P2T1 348 aaKnown RBP6.81□□□□□ -1.32
HMGB3P11-201ENST00000440127 MAGEB6P1A0A0J9YX57 407 aa6.8□□□□□ -1.32
HMGB3P11-201ENST00000440127 USP17L8P0C7I0 530 aa6.8□□□□□ -1.32
HMGB3P11-201ENST00000440127 SCARF1Q14162 830 aa6.8□□□□□ -1.32
HMGB3P11-201ENST00000440127 SLC10A4Q96EP9 437 aa6.8□□□□□ -1.32
HMGB3P11-201ENST00000440127 ARHGAP9Q9BRR9 750 aa6.8□□□□□ -1.32
HMGB3P11-201ENST00000440127 C1QTNF2Q9BXJ5 285 aa6.8□□□□□ -1.32
HMGB3P11-201ENST00000440127 UPP2O95045 317 aa6.79□□□□□ -1.32
HMGB3P11-201ENST00000440127 RFC5P40937 340 aa6.79□□□□□ -1.32
HMGB3P11-201ENST00000440127 BRPF1P55201 1214 aaPredicted RBP6.79□□□□□ -1.32
HMGB3P11-201ENST00000440127 VASH1Q7L8A9 365 aaPredicted RBP6.79□□□□□ -1.32
HMGB3P11-201ENST00000440127 SH3BP5LQ7L8J4 393 aa6.79□□□□□ -1.32
HMGB3P11-201ENST00000440127 ZBTB33Q86T24 672 aa6.79□□□□□ -1.32
HMGB3P11-201ENST00000440127 TRIM47Q96LD4 638 aa6.79□□□□□ -1.32
HMGB3P11-201ENST00000440127 LCE2AQ5TA79 106 aaPredicted RBP6.78□□□□□ -1.32
HMGB3P11-201ENST00000440127 SH3RF1Q7Z6J0 888 aa6.78□□□□□ -1.32
HMGB3P11-201ENST00000440127 IL27Q8NEV9 243 aa6.78□□□□□ -1.32
HMGB3P11-201ENST00000440127 WDR4P57081 412 aaKnown RBP6.77□□□□□ -1.33
HMGB3P11-201ENST00000440127 DHX9Q08211 1270 aaKnown RBP6.77□□□□□ -1.33
HMGB3P11-201ENST00000440127 NBPF20Q3BBV1 942 aa6.77□□□□□ -1.33
HMGB3P11-201ENST00000440127 LRRN4Q8WUT4 740 aa6.77□□□□□ -1.33
HMGB3P11-201ENST00000440127 CARD14Q9BXL6 1004 aa6.77□□□□□ -1.33
HMGB3P11-201ENST00000440127 SOCS7O14512 581 aa6.76□□□□□ -1.33
HMGB3P11-201ENST00000440127 FSHRP23945 695 aa6.76□□□□□ -1.33
HMGB3P11-201ENST00000440127 PGPEP1Q9NXJ5 209 aa6.76□□□□□ -1.33
HMGB3P11-201ENST00000440127 EMILIN1Q9Y6C2 1016 aa6.76□□□□□ -1.33
HMGB3P11-201ENST00000440127 PRKCSHP14314 528 aaPredicted RBP6.75□□□□□ -1.33
HMGB3P11-201ENST00000440127 NR6A1Q15406 480 aa6.75□□□□□ -1.33
HMGB3P11-201ENST00000440127 BANK1Q8NDB2 785 aa6.75□□□□□ -1.33
HMGB3P11-201ENST00000440127 PRM3Q9NNZ6 103 aa6.75□□□□□ -1.33
HMGB3P11-201ENST00000440127 ZNF330Q9Y3S2 320 aaPredicted RBP6.75□□□□□ -1.33
HMGB3P11-201ENST00000440127 TIMP2P16035 220 aa6.74□□□□□ -1.33
HMGB3P11-201ENST00000440127 ERFEQ4G0M1 354 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms