RNA–Protein interactions for RNA: ENST00000439512.5

TOM1-207, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-207ENST00000439512 CABP1Q9NZU7 370 aa23.32■■□□□ 1.32
TOM1-207ENST00000439512 AKAP12Q02952 1782 aa23.32■■□□□ 1.32
TOM1-207ENST00000439512 FNBP4Q8N3X1 1017 aaPredicted RBP23.31■■□□□ 1.32
TOM1-207ENST00000439512 CABLES1Q8TDN4 633 aa23.31■■□□□ 1.32
TOM1-207ENST00000439512 SLIT2O94813 1529 aa23.3■■□□□ 1.32
TOM1-207ENST00000439512 PLCH1Q4KWH8 1693 aa23.3■■□□□ 1.32
TOM1-207ENST00000439512 ST20-MTHFSA0A0A6YYL1 179 aa23.3■■□□□ 1.32
TOM1-207ENST00000439512 BCL9LQ86UU0 1499 aa23.3■■□□□ 1.32
TOM1-207ENST00000439512 HAP1P54257 671 aaPredicted RBP23.29■■□□□ 1.32
TOM1-207ENST00000439512 NRKQ7Z2Y5 1582 aa23.29■■□□□ 1.32
TOM1-207ENST00000439512 SSH2Q76I76 1423 aa23.28■■□□□ 1.32
TOM1-207ENST00000439512 CDK12Q9NYV4 1490 aaPredicted RBP23.27■■□□□ 1.32
TOM1-207ENST00000439512 NWD2Q9ULI1 1742 aa23.27■■□□□ 1.32
TOM1-207ENST00000439512 ATRNO75882 1429 aa23.26■■□□□ 1.31
TOM1-207ENST00000439512 USP6P35125 1406 aa23.26■■□□□ 1.31
TOM1-207ENST00000439512 TESK2Q96S53 571 aa23.26■■□□□ 1.31
TOM1-207ENST00000439512 MON2Q7Z3U7 1717 aa23.25■■□□□ 1.31
TOM1-207ENST00000439512 ATAD2Q6PL18 1390 aa23.25■■□□□ 1.31
TOM1-207ENST00000439512 NRAPQ86VF7 1730 aa23.25■■□□□ 1.31
TOM1-207ENST00000439512 PIK3C2AO00443 1686 aa23.24■■□□□ 1.31
TOM1-207ENST00000439512 CPSF1Q10570 1443 aaKnown RBP23.24■■□□□ 1.31
TOM1-207ENST00000439512 CD163L1Q9NR16 1453 aa23.24■■□□□ 1.31
TOM1-207ENST00000439512 BRD4O60885 1362 aaPredicted RBP23.23■■□□□ 1.31
TOM1-207ENST00000439512 NUTM2GQ5VZR2 741 aa23.22■■□□□ 1.31
TOM1-207ENST00000439512 USP21Q9UK80 565 aa23.22■■□□□ 1.31
TOM1-207ENST00000439512 USP47Q96K76 1375 aa23.22■■□□□ 1.31
TOM1-207ENST00000439512 COL14A1Q05707 1796 aaKnown RBP23.22■■□□□ 1.31
TOM1-207ENST00000439512 QTRT2Q9H974 415 aaKnown RBP23.21■■□□□ 1.31
TOM1-207ENST00000439512 RGS12O14924 1447 aa23.2■■□□□ 1.3
TOM1-207ENST00000439512 SLC24A1O60721 1099 aa23.2■■□□□ 1.3
TOM1-207ENST00000439512 ABTB2Q8N961 1025 aa23.2■■□□□ 1.3
TOM1-207ENST00000439512 TMC1Q8TDI8 760 aa23.2■■□□□ 1.3
TOM1-207ENST00000439512 GLI3P10071 1580 aa23.19■■□□□ 1.3
TOM1-207ENST00000439512 USP19O94966 1318 aa23.19■■□□□ 1.3
TOM1-207ENST00000439512 ZNF692Q9BU19 519 aaPredicted RBP23.18■■□□□ 1.3
TOM1-207ENST00000439512 SLIT3O75094 1523 aa23.18■■□□□ 1.3
TOM1-207ENST00000439512 RXRBP28702 533 aa23.17■■□□□ 1.3
TOM1-207ENST00000439512 PUS7Q96PZ0 661 aaKnown RBP23.17■■□□□ 1.3
TOM1-207ENST00000439512 USP54Q70EL1 1684 aa23.16■■□□□ 1.3
TOM1-207ENST00000439512 RBM6P78332 1123 aaKnown RBP23.16■■□□□ 1.3
TOM1-207ENST00000439512 SLC12A5Q9H2X9 1139 aa23.16■■□□□ 1.3
TOM1-207ENST00000439512 TRPC5Q9UL62 973 aaPredicted RBP23.16■■□□□ 1.3
TOM1-207ENST00000439512 FAM83GA6ND36 823 aa23.15■■□□□ 1.3
TOM1-207ENST00000439512 LMO7Q8WWI1 1683 aa23.15■■□□□ 1.3
TOM1-207ENST00000439512 TMF1P82094 1093 aa23.14■■□□□ 1.29
TOM1-207ENST00000439512 NLRP13Q86W25 1043 aa23.13■■□□□ 1.29
TOM1-207ENST00000439512 UNC5CLQ8IV45 518 aa23.13■■□□□ 1.29
TOM1-207ENST00000439512 NLRP6P59044 892 aa23.11■■□□□ 1.29
TOM1-207ENST00000439512 KIAA0232Q92628 1395 aa23.11■■□□□ 1.29
TOM1-207ENST00000439512 TTC21BQ7Z4L5 1316 aa23.1■■□□□ 1.29
TOM1-207ENST00000439512 MYOM1P52179 1685 aa23.1■■□□□ 1.29
TOM1-207ENST00000439512 HDGFL2Q7Z4V5 671 aaPredicted RBP23.1■■□□□ 1.29
TOM1-207ENST00000439512 CPDO75976 1380 aa23.1■■□□□ 1.29
TOM1-207ENST00000439512 KTN1Q86UP2 1357 aaKnown RBP23.1■■□□□ 1.29
TOM1-207ENST00000439512 ZC3H6P61129 1189 aaKnown RBP23.09■■□□□ 1.29
TOM1-207ENST00000439512 NINLQ9Y2I6 1382 aa23.09■■□□□ 1.29
TOM1-207ENST00000439512 PRDM11Q9NQV5 511 aa23.08■■□□□ 1.29
TOM1-207ENST00000439512 TERF2IPQ9NYB0 399 aa23.08■■□□□ 1.29
TOM1-207ENST00000439512 A0A1W2PP64 1363 aa23.08■■□□□ 1.29
TOM1-207ENST00000439512 TTC21AQ8NDW8 1320 aa23.08■■□□□ 1.28
TOM1-207ENST00000439512 EIF4G2P78344 907 aaKnown RBP eCLIP23.07■■□□□ 1.28
TOM1-207ENST00000439512 VPS72Q15906 364 aa23.07■■□□□ 1.28
TOM1-207ENST00000439512 GJD4Q96KN9 370 aaPredicted RBP23.07■■□□□ 1.28
TOM1-207ENST00000439512 COL18A1P39060 1754 aa23.06■■□□□ 1.28
TOM1-207ENST00000439512 CDCA8Q53HL2 280 aa23.06■■□□□ 1.28
TOM1-207ENST00000439512 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.06■■□□□ 1.28
TOM1-207ENST00000439512 BTG4Q9NY30 223 aa23.06■■□□□ 1.28
TOM1-207ENST00000439512 NFAT5O94916 1531 aa23.06■■□□□ 1.28
TOM1-207ENST00000439512 GCP02774 474 aa23.05■■□□□ 1.28
TOM1-207ENST00000439512 HSPA5P11021 654 aaKnown RBP23.05■■□□□ 1.28
TOM1-207ENST00000439512 CHRNA2Q15822 529 aa23.05■■□□□ 1.28
TOM1-207ENST00000439512 CAMTA1Q9Y6Y1 1673 aa23.05■■□□□ 1.28
TOM1-207ENST00000439512 EDC4Q6P2E9 1401 aaKnown RBP23.05■■□□□ 1.28
TOM1-207ENST00000439512 USP31Q70CQ4 1352 aa23.03■■□□□ 1.28
TOM1-207ENST00000439512 CCDC9Q9Y3X0 531 aaKnown RBP23.03■■□□□ 1.28
TOM1-207ENST00000439512 BRWD3Q6RI45 1802 aa23.02■■□□□ 1.28
TOM1-207ENST00000439512 ZRANB1Q9UGI0 708 aa23.01■■□□□ 1.27
TOM1-207ENST00000439512 THSD7AQ9UPZ6 1657 aa23■■□□□ 1.27
TOM1-207ENST00000439512 NME9Q86XW9 330 aa23■■□□□ 1.27
TOM1-207ENST00000439512 ANKRD36BQ8N2N9 1353 aa23■■□□□ 1.27
TOM1-207ENST00000439512 OVOS2A0A0J9YW53 1432 aa22.99■■□□□ 1.27
TOM1-207ENST00000439512 OVOS2Q6IE36 1432 aa22.99■■□□□ 1.27
TOM1-207ENST00000439512 ZBTB7CA1YPR0 619 aa22.99■■□□□ 1.27
TOM1-207ENST00000439512 SOX12O15370 315 aa22.98■■□□□ 1.27
TOM1-207ENST00000439512 POLR3GLQ9BT43 218 aa22.98■■□□□ 1.27
TOM1-207ENST00000439512 COL5A2P05997 1499 aaPredicted RBP22.98■■□□□ 1.27
TOM1-207ENST00000439512 ONECUT3O60422 494 aaPredicted RBP22.97■■□□□ 1.27
TOM1-207ENST00000439512 SPATA31A5Q5VU36 1347 aa22.97■■□□□ 1.27
TOM1-207ENST00000439512 SPATA31A7Q8IWB4 1347 aa22.97■■□□□ 1.27
TOM1-207ENST00000439512 EVA1CP58658 441 aa22.96■■□□□ 1.27
TOM1-207ENST00000439512 KCNH5Q8NCM2 988 aa22.96■■□□□ 1.27
TOM1-207ENST00000439512 STRN4Q9NRL3 753 aa22.96■■□□□ 1.27
TOM1-207ENST00000439512 AATKQ6ZMQ8 1374 aa22.96■■□□□ 1.27
TOM1-207ENST00000439512 ABCC6O95255 1503 aa22.96■■□□□ 1.27
TOM1-207ENST00000439512 RGPD5Q99666 1765 aa22.94■■□□□ 1.26
TOM1-207ENST00000439512 UPF1Q92900 1129 aaKnown RBP eCLIP22.94■■□□□ 1.26
TOM1-207ENST00000439512 LTN1O94822 1766 aa22.94■■□□□ 1.26
TOM1-207ENST00000439512 EP400Q96L91 3159 aa22.93■■□□□ 1.26
TOM1-207ENST00000439512 SPATA31A1Q5TZJ5 1347 aa22.92■■□□□ 1.26
TOM1-207ENST00000439512 ARHGEF25Q86VW2 580 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms