RNA–Protein interactions for RNA: ENST00000438672.5

EFEMP1-206, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

TSL 4

Gene EFEMP1, Length 733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-206ENST00000438672 UPF1Q92900 1129 aaKnown RBP eCLIP23.28■■□□□ 1.32
EFEMP1-206ENST00000438672 PLCH1Q4KWH8 1693 aa23.26■■□□□ 1.31
EFEMP1-206ENST00000438672 NUDT16Q96DE0 195 aaKnown RBP23.26■■□□□ 1.31
EFEMP1-206ENST00000438672 CDK19Q9BWU1 502 aa23.26■■□□□ 1.31
EFEMP1-206ENST00000438672 NGDNQ8NEJ9 315 aaKnown RBP23.25■■□□□ 1.31
EFEMP1-206ENST00000438672 EVC2Q86UK5 1308 aa23.23■■□□□ 1.31
EFEMP1-206ENST00000438672 ST20-MTHFSA0A0A6YYL1 179 aa23.22■■□□□ 1.31
EFEMP1-206ENST00000438672 UNC5CLQ8IV45 518 aa23.22■■□□□ 1.31
EFEMP1-206ENST00000438672 TESK2Q96S53 571 aa23.22■■□□□ 1.31
EFEMP1-206ENST00000438672 CRYBG1Q9Y4K1 1723 aa23.22■■□□□ 1.31
EFEMP1-206ENST00000438672 GLI3P10071 1580 aa23.21■■□□□ 1.31
EFEMP1-206ENST00000438672 NWD2Q9ULI1 1742 aa23.21■■□□□ 1.31
EFEMP1-206ENST00000438672 GJD4Q96KN9 370 aaPredicted RBP23.2■■□□□ 1.3
EFEMP1-206ENST00000438672 PAK3O75914 559 aaPredicted RBP23.19■■□□□ 1.3
EFEMP1-206ENST00000438672 SRPK2P78362 688 aaKnown RBP23.19■■□□□ 1.3
EFEMP1-206ENST00000438672 POLR3AO14802 1390 aaPredicted RBP23.18■■□□□ 1.3
EFEMP1-206ENST00000438672 CABP2Q9NPB3 220 aa23.18■■□□□ 1.3
EFEMP1-206ENST00000438672 CCDC61Q9Y6R9 512 aa23.17■■□□□ 1.3
EFEMP1-206ENST00000438672 ATAD2Q6PL18 1390 aa23.16■■□□□ 1.3
EFEMP1-206ENST00000438672 ACEP12821 1306 aa23.16■■□□□ 1.3
EFEMP1-206ENST00000438672 FAM83GA6ND36 823 aa23.15■■□□□ 1.3
EFEMP1-206ENST00000438672 NRAPQ86VF7 1730 aa23.15■■□□□ 1.3
EFEMP1-206ENST00000438672 PPIP5K1Q6PFW1 1433 aa23.15■■□□□ 1.3
EFEMP1-206ENST00000438672 PLEKHG3A1L390 1219 aa23.14■■□□□ 1.29
EFEMP1-206ENST00000438672 PHRF1Q9P1Y6 1649 aaKnown RBP23.14■■□□□ 1.29
EFEMP1-206ENST00000438672 COL14A1Q05707 1796 aaKnown RBP23.14■■□□□ 1.29
EFEMP1-206ENST00000438672 SLC24A1O60721 1099 aa23.13■■□□□ 1.29
EFEMP1-206ENST00000438672 VPS72Q15906 364 aa23.12■■□□□ 1.29
EFEMP1-206ENST00000438672 EIF4G2P78344 907 aaKnown RBP eCLIP23.11■■□□□ 1.29
EFEMP1-206ENST00000438672 PUS7Q96PZ0 661 aaKnown RBP23.1■■□□□ 1.29
EFEMP1-206ENST00000438672 NUTM2GQ5VZR2 741 aa23.09■■□□□ 1.29
EFEMP1-206ENST00000438672 BTG4Q9NY30 223 aa23.09■■□□□ 1.29
EFEMP1-206ENST00000438672 CCDC9Q9Y3X0 531 aaKnown RBP23.09■■□□□ 1.29
EFEMP1-206ENST00000438672 HSPA5P11021 654 aaKnown RBP23.08■■□□□ 1.29
EFEMP1-206ENST00000438672 TMF1P82094 1093 aa23.07■■□□□ 1.28
EFEMP1-206ENST00000438672 CABP1Q9NZU7 370 aa23.07■■□□□ 1.28
EFEMP1-206ENST00000438672 BRWD3Q6RI45 1802 aa23.07■■□□□ 1.28
EFEMP1-206ENST00000438672 NRKQ7Z2Y5 1582 aa23.06■■□□□ 1.28
EFEMP1-206ENST00000438672 PRDM11Q9NQV5 511 aa23.06■■□□□ 1.28
EFEMP1-206ENST00000438672 EP400Q96L91 3159 aa23.05■■□□□ 1.28
EFEMP1-206ENST00000438672 KIAA0232Q92628 1395 aa23.05■■□□□ 1.28
EFEMP1-206ENST00000438672 AKAP12Q02952 1782 aa23.04■■□□□ 1.28
EFEMP1-206ENST00000438672 SEPT12Q8IYM1 358 aa23.04■■□□□ 1.28
EFEMP1-206ENST00000438672 CPSF1Q10570 1443 aaKnown RBP23.03■■□□□ 1.28
EFEMP1-206ENST00000438672 ABTB2Q8N961 1025 aa23.03■■□□□ 1.28
EFEMP1-206ENST00000438672 USP6P35125 1406 aa23.02■■□□□ 1.28
EFEMP1-206ENST00000438672 CD163L1Q9NR16 1453 aa23.02■■□□□ 1.28
EFEMP1-206ENST00000438672 NINLQ9Y2I6 1382 aa23.01■■□□□ 1.27
EFEMP1-206ENST00000438672 CHRNA2Q15822 529 aa23.01■■□□□ 1.27
EFEMP1-206ENST00000438672 USP19O94966 1318 aa23.01■■□□□ 1.27
EFEMP1-206ENST00000438672 ONECUT3O60422 494 aaPredicted RBP23■■□□□ 1.27
EFEMP1-206ENST00000438672 ZC3H6P61129 1189 aaKnown RBP23■■□□□ 1.27
EFEMP1-206ENST00000438672 BRD4O60885 1362 aaPredicted RBP23■■□□□ 1.27
EFEMP1-206ENST00000438672 SSH2Q76I76 1423 aa22.99■■□□□ 1.27
EFEMP1-206ENST00000438672 MON2Q7Z3U7 1717 aa22.99■■□□□ 1.27
EFEMP1-206ENST00000438672 CDCA8Q53HL2 280 aa22.99■■□□□ 1.27
EFEMP1-206ENST00000438672 MYOM1P52179 1685 aa22.99■■□□□ 1.27
EFEMP1-206ENST00000438672 FAM98CQ17RN3 349 aaKnown RBP22.98■■□□□ 1.27
EFEMP1-206ENST00000438672 SPATA31A5Q5VU36 1347 aa22.98■■□□□ 1.27
EFEMP1-206ENST00000438672 SPATA31A7Q8IWB4 1347 aa22.98■■□□□ 1.27
EFEMP1-206ENST00000438672 A0A0G2JS52 829 aa22.97■■□□□ 1.27
EFEMP1-206ENST00000438672 MYT1Q01538 1121 aa22.97■■□□□ 1.27
EFEMP1-206ENST00000438672 PIK3C2AO00443 1686 aa22.97■■□□□ 1.27
EFEMP1-206ENST00000438672 SLC12A5Q9H2X9 1139 aa22.96■■□□□ 1.27
EFEMP1-206ENST00000438672 CPDO75976 1380 aa22.95■■□□□ 1.26
EFEMP1-206ENST00000438672 NLRP13Q86W25 1043 aa22.95■■□□□ 1.26
EFEMP1-206ENST00000438672 TMC1Q8TDI8 760 aa22.95■■□□□ 1.26
EFEMP1-206ENST00000438672 LMO7Q8WWI1 1683 aa22.95■■□□□ 1.26
EFEMP1-206ENST00000438672 ZNF692Q9BU19 519 aaPredicted RBP22.95■■□□□ 1.26
EFEMP1-206ENST00000438672 THSD7AQ9UPZ6 1657 aa22.95■■□□□ 1.26
EFEMP1-206ENST00000438672 A0A1W2PP64 1363 aa22.94■■□□□ 1.26
EFEMP1-206ENST00000438672 KRT27Q7Z3Y8 459 aa22.94■■□□□ 1.26
EFEMP1-206ENST00000438672 STRN4Q9NRL3 753 aa22.94■■□□□ 1.26
EFEMP1-206ENST00000438672 BLMP54132 1417 aaPredicted RBP22.93■■□□□ 1.26
EFEMP1-206ENST00000438672 KTN1Q86UP2 1357 aaKnown RBP22.93■■□□□ 1.26
EFEMP1-206ENST00000438672 CCDC125Q86Z20 511 aa22.93■■□□□ 1.26
EFEMP1-206ENST00000438672 CAMTA1Q9Y6Y1 1673 aa22.93■■□□□ 1.26
EFEMP1-206ENST00000438672 SLIT3O75094 1523 aa22.92■■□□□ 1.26
EFEMP1-206ENST00000438672 GCP02774 474 aa22.92■■□□□ 1.26
EFEMP1-206ENST00000438672 TERF2IPQ9NYB0 399 aa22.92■■□□□ 1.26
EFEMP1-206ENST00000438672 ANKRD36BQ8N2N9 1353 aa22.91■■□□□ 1.26
EFEMP1-206ENST00000438672 SPATA31A1Q5TZJ5 1347 aa22.91■■□□□ 1.26
EFEMP1-206ENST00000438672 NLRP6P59044 892 aa22.91■■□□□ 1.26
EFEMP1-206ENST00000438672 EDC4Q6P2E9 1401 aaKnown RBP22.91■■□□□ 1.26
EFEMP1-206ENST00000438672 HDGFL2Q7Z4V5 671 aaPredicted RBP22.9■■□□□ 1.26
EFEMP1-206ENST00000438672 TTC21BQ7Z4L5 1316 aa22.89■■□□□ 1.26
EFEMP1-206ENST00000438672 C11orf95C9JLR9 678 aaPredicted RBP22.89■■□□□ 1.25
EFEMP1-206ENST00000438672 ZEB1P37275 1124 aaPredicted RBP22.89■■□□□ 1.25
EFEMP1-206ENST00000438672 TTC21AQ8NDW8 1320 aa22.88■■□□□ 1.25
EFEMP1-206ENST00000438672 USP35Q9P2H5 1018 aa22.86■■□□□ 1.25
EFEMP1-206ENST00000438672 USP54Q70EL1 1684 aa22.86■■□□□ 1.25
EFEMP1-206ENST00000438672 COL5A2P05997 1499 aaPredicted RBP22.85■■□□□ 1.25
EFEMP1-206ENST00000438672 ZBTB7CA1YPR0 619 aa22.85■■□□□ 1.25
EFEMP1-206ENST00000438672 EVA1CP58658 441 aa22.85■■□□□ 1.25
EFEMP1-206ENST00000438672 LARP1Q6PKG0 1096 aaKnown RBP22.85■■□□□ 1.25
EFEMP1-206ENST00000438672 KIF7Q2M1P5 1343 aa22.84■■□□□ 1.25
EFEMP1-206ENST00000438672 FAM182BQ5T319 152 aa22.83■■□□□ 1.25
EFEMP1-206ENST00000438672 DEFB132Q7Z7B7 95 aa22.83■■□□□ 1.25
EFEMP1-206ENST00000438672 AATKQ6ZMQ8 1374 aa22.82■■□□□ 1.24
EFEMP1-206ENST00000438672 SF3B2Q13435 895 aaKnown RBP22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms