RNA–Protein interactions for RNA: ENST00000438067.5

PTCH2-202, Transcript of patched 2, humanhuman

TSL 3

Gene PTCH2, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-202ENST00000438067 PAK3O75914 559 aaPredicted RBP25.39■■□□□ 1.66
PTCH2-202ENST00000438067 TRPM3Q9HCF6 1732 aaPredicted RBP25.38■■□□□ 1.65
PTCH2-202ENST00000438067 HRCP23327 699 aa25.35■■□□□ 1.65
PTCH2-202ENST00000438067 NUDT16Q96DE0 195 aaKnown RBP25.35■■□□□ 1.65
PTCH2-202ENST00000438067 ALS2Q96Q42 1657 aa25.35■■□□□ 1.65
PTCH2-202ENST00000438067 SPATA31A5Q5VU36 1347 aa25.35■■□□□ 1.65
PTCH2-202ENST00000438067 SPATA31A7Q8IWB4 1347 aa25.35■■□□□ 1.65
PTCH2-202ENST00000438067 BAG6P46379 1132 aa25.33■■□□□ 1.65
PTCH2-202ENST00000438067 PRDM11Q9NQV5 511 aa25.33■■□□□ 1.65
PTCH2-202ENST00000438067 NRAPQ86VF7 1730 aa25.32■■□□□ 1.64
PTCH2-202ENST00000438067 COL14A1Q05707 1796 aaKnown RBP25.31■■□□□ 1.64
PTCH2-202ENST00000438067 FAM182BQ5T319 152 aa25.31■■□□□ 1.64
PTCH2-202ENST00000438067 CDK19Q9BWU1 502 aa25.3■■□□□ 1.64
PTCH2-202ENST00000438067 ATP7BP35670 1465 aa25.28■■□□□ 1.64
PTCH2-202ENST00000438067 CHRNA2Q15822 529 aa25.27■■□□□ 1.64
PTCH2-202ENST00000438067 KIAA0232Q92628 1395 aa25.27■■□□□ 1.64
PTCH2-202ENST00000438067 PSDA5PKW4 1024 aaPredicted RBP25.26■■□□□ 1.63
PTCH2-202ENST00000438067 EN1Q05925 392 aaPredicted RBP25.26■■□□□ 1.63
PTCH2-202ENST00000438067 ZC3H6P61129 1189 aaKnown RBP25.25■■□□□ 1.63
PTCH2-202ENST00000438067 NBPF8Q3BBV2 869 aa25.25■■□□□ 1.63
PTCH2-202ENST00000438067 NUTM2GQ5VZR2 741 aa25.25■■□□□ 1.63
PTCH2-202ENST00000438067 CCDC61Q9Y6R9 512 aa25.25■■□□□ 1.63
PTCH2-202ENST00000438067 SPATA31A1Q5TZJ5 1347 aa25.25■■□□□ 1.63
PTCH2-202ENST00000438067 ACEP12821 1306 aa25.23■■□□□ 1.63
PTCH2-202ENST00000438067 STRN4Q9NRL3 753 aa25.23■■□□□ 1.63
PTCH2-202ENST00000438067 POLR3AO14802 1390 aaPredicted RBP25.22■■□□□ 1.63
PTCH2-202ENST00000438067 PLEKHG3A1L390 1219 aa25.22■■□□□ 1.63
PTCH2-202ENST00000438067 CRYBG1Q9Y4K1 1723 aa25.22■■□□□ 1.63
PTCH2-202ENST00000438067 ARHGEF28Q8N1W1 1705 aaKnown RBP25.21■■□□□ 1.63
PTCH2-202ENST00000438067 NBPF1Q3BBV0 1214 aa25.19■■□□□ 1.62
PTCH2-202ENST00000438067 THSD7AQ9UPZ6 1657 aa25.19■■□□□ 1.62
PTCH2-202ENST00000438067 EVA1CP58658 441 aa25.17■■□□□ 1.62
PTCH2-202ENST00000438067 FAM196AQ6ZSG2 479 aa25.17■■□□□ 1.62
PTCH2-202ENST00000438067 ABTB2Q8N961 1025 aa25.17■■□□□ 1.62
PTCH2-202ENST00000438067 ITSN1Q15811 1721 aa25.17■■□□□ 1.62
PTCH2-202ENST00000438067 DISP2A7MBM2 1401 aa25.16■■□□□ 1.62
PTCH2-202ENST00000438067 USP35Q9P2H5 1018 aa25.16■■□□□ 1.62
PTCH2-202ENST00000438067 TRIM37O94972 964 aa25.15■■□□□ 1.62
PTCH2-202ENST00000438067 R3HDM1Q15032 1099 aaKnown RBP25.15■■□□□ 1.62
PTCH2-202ENST00000438067 EZH2Q15910 746 aaKnown RBP25.15■■□□□ 1.62
PTCH2-202ENST00000438067 LRP5O75197 1615 aa25.15■■□□□ 1.62
PTCH2-202ENST00000438067 BARGINQ6ZT62 677 aa25.14■■□□□ 1.62
PTCH2-202ENST00000438067 CAMKK2Q96RR4 588 aa25.13■■□□□ 1.61
PTCH2-202ENST00000438067 RGPD1P0DJD0 1748 aa25.12■■□□□ 1.61
PTCH2-202ENST00000438067 SRPK2P78362 688 aaKnown RBP25.12■■□□□ 1.61
PTCH2-202ENST00000438067 LARP1Q6PKG0 1096 aaKnown RBP25.12■■□□□ 1.61
PTCH2-202ENST00000438067 PHRF1Q9P1Y6 1649 aaKnown RBP25.12■■□□□ 1.61
PTCH2-202ENST00000438067 SSH2Q76I76 1423 aa25.12■■□□□ 1.61
PTCH2-202ENST00000438067 USP19O94966 1318 aa25.12■■□□□ 1.61
PTCH2-202ENST00000438067 CPDO75976 1380 aa25.1■■□□□ 1.61
PTCH2-202ENST00000438067 APBA3O96018 575 aa25.1■■□□□ 1.61
PTCH2-202ENST00000438067 PDE3BQ13370 1112 aa25.1■■□□□ 1.61
PTCH2-202ENST00000438067 NLRP13Q86W25 1043 aa25.1■■□□□ 1.61
PTCH2-202ENST00000438067 GCP02774 474 aa25.09■■□□□ 1.61
PTCH2-202ENST00000438067 TCP11L2Q8N4U5 519 aa25.09■■□□□ 1.61
PTCH2-202ENST00000438067 CABP2Q9NPB3 220 aa25.09■■□□□ 1.61
PTCH2-202ENST00000438067 TOPAZ1Q8N9V7 1692 aa25.09■■□□□ 1.61
PTCH2-202ENST00000438067 CAMTA1Q9Y6Y1 1673 aa25.09■■□□□ 1.61
PTCH2-202ENST00000438067 CENPJQ9HC77 1338 aaPredicted RBP25.09■■□□□ 1.61
PTCH2-202ENST00000438067 KIAA1210Q9ULL0 1709 aa25.07■■□□□ 1.6
PTCH2-202ENST00000438067 PPIP5K1Q6PFW1 1433 aa25.07■■□□□ 1.6
PTCH2-202ENST00000438067 TNS1Q9HBL0 1735 aaKnown RBP25.06■■□□□ 1.6
PTCH2-202ENST00000438067 NRKQ7Z2Y5 1582 aa25.05■■□□□ 1.6
PTCH2-202ENST00000438067 THRAP3Q9Y2W1 955 aaKnown RBP25.04■■□□□ 1.6
PTCH2-202ENST00000438067 PARD3Q8TEW0 1356 aa25.04■■□□□ 1.6
PTCH2-202ENST00000438067 CABP1Q9NZU7 370 aa25.03■■□□□ 1.6
PTCH2-202ENST00000438067 BRD4O60885 1362 aaPredicted RBP25.03■■□□□ 1.6
PTCH2-202ENST00000438067 LMO7Q8WWI1 1683 aa25.01■■□□□ 1.59
PTCH2-202ENST00000438067 NLRP6P59044 892 aa25■■□□□ 1.59
PTCH2-202ENST00000438067 COL5A2P05997 1499 aaPredicted RBP24.97■■□□□ 1.59
PTCH2-202ENST00000438067 USP6P35125 1406 aa24.97■■□□□ 1.59
PTCH2-202ENST00000438067 ZBTB7CA1YPR0 619 aa24.97■■□□□ 1.59
PTCH2-202ENST00000438067 L3MBTL2Q969R5 705 aa24.97■■□□□ 1.59
PTCH2-202ENST00000438067 AATKQ6ZMQ8 1374 aa24.95■■□□□ 1.59
PTCH2-202ENST00000438067 NBPF14Q5TI25 921 aa24.95■■□□□ 1.58
PTCH2-202ENST00000438067 CRB1P82279 1406 aa24.95■■□□□ 1.58
PTCH2-202ENST00000438067 C11orf95C9JLR9 678 aaPredicted RBP24.94■■□□□ 1.58
PTCH2-202ENST00000438067 EVC2Q86UK5 1308 aa24.92■■□□□ 1.58
PTCH2-202ENST00000438067 TOM1L2Q6ZVM7 507 aa24.9■■□□□ 1.58
PTCH2-202ENST00000438067 AXIN2Q9Y2T1 843 aa24.9■■□□□ 1.58
PTCH2-202ENST00000438067 QRICH2Q9H0J4 1663 aa24.89■■□□□ 1.58
PTCH2-202ENST00000438067 DDB1Q16531 1140 aa24.89■■□□□ 1.58
PTCH2-202ENST00000438067 ZNF692Q9BU19 519 aaPredicted RBP24.89■■□□□ 1.58
PTCH2-202ENST00000438067 SLIT3O75094 1523 aa24.89■■□□□ 1.57
PTCH2-202ENST00000438067 SIN3AQ96ST3 1273 aa24.88■■□□□ 1.57
PTCH2-202ENST00000438067 TTC21BQ7Z4L5 1316 aa24.86■■□□□ 1.57
PTCH2-202ENST00000438067 OVOS2A0A0G2JMS6 1433 aa24.86■■□□□ 1.57
PTCH2-202ENST00000438067 OVOS2A0A0J9YW53 1432 aa24.86■■□□□ 1.57
PTCH2-202ENST00000438067 OVOS2Q6IE36 1432 aa24.86■■□□□ 1.57
PTCH2-202ENST00000438067 PARP4Q9UKK3 1724 aaKnown RBP24.86■■□□□ 1.57
PTCH2-202ENST00000438067 RREB1Q92766 1687 aa24.86■■□□□ 1.57
PTCH2-202ENST00000438067 ARHGEF25Q86VW2 580 aa24.86■■□□□ 1.57
PTCH2-202ENST00000438067 WDR17Q8IZU2 1322 aa24.86■■□□□ 1.57
PTCH2-202ENST00000438067 PLSCR1O15162 318 aa24.85■■□□□ 1.57
PTCH2-202ENST00000438067 KCNH5Q8NCM2 988 aa24.85■■□□□ 1.57
PTCH2-202ENST00000438067 NUP188Q5SRE5 1749 aa24.83■■□□□ 1.57
PTCH2-202ENST00000438067 PTF1AQ7RTS3 328 aa24.83■■□□□ 1.57
PTCH2-202ENST00000438067 BCL11BQ9C0K0 894 aaPredicted RBP24.83■■□□□ 1.57
PTCH2-202ENST00000438067 SPON1Q9HCB6 807 aa24.83■■□□□ 1.57
PTCH2-202ENST00000438067 CPSF1Q10570 1443 aaKnown RBP24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms