RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 ELOAQ14241 798 aaKnown RBP9.72□□□□□ -0.85
SPEN-202ENST00000438066 RETREG3Q86VR2 466 aa9.72□□□□□ -0.85
SPEN-202ENST00000438066 CCER1Q8TC90 406 aaPredicted RBP9.72□□□□□ -0.85
SPEN-202ENST00000438066 RABGEF1Q9UJ41 708 aa9.72□□□□□ -0.85
SPEN-202ENST00000438066 EEA1Q15075 1411 aa9.71□□□□□ -0.86
SPEN-202ENST00000438066 USP17L3A6NCW0 530 aa9.7□□□□□ -0.86
SPEN-202ENST00000438066 USP17L4A6NCW7 530 aa9.7□□□□□ -0.86
SPEN-202ENST00000438066 USP17L2Q6R6M4 530 aa9.7□□□□□ -0.86
SPEN-202ENST00000438066 USP17L1Q7RTZ2 530 aa9.7□□□□□ -0.86
SPEN-202ENST00000438066 SAMD7Q7Z3H4 446 aa9.7□□□□□ -0.86
SPEN-202ENST00000438066 SKIP12755 728 aa9.7□□□□□ -0.86
SPEN-202ENST00000438066 PHLDB3Q6NSJ2 640 aa9.7□□□□□ -0.86
SPEN-202ENST00000438066 FAM9AQ8IZU1 332 aaPredicted RBP9.7□□□□□ -0.86
SPEN-202ENST00000438066 DEPDC4Q8N2C3 294 aa9.7□□□□□ -0.86
SPEN-202ENST00000438066 UNCXA6NJT0 531 aa9.69□□□□□ -0.86
SPEN-202ENST00000438066 ZBBXA8MT70 800 aa9.69□□□□□ -0.86
SPEN-202ENST00000438066 PUS10Q3MIT2 529 aaKnown RBP9.69□□□□□ -0.86
SPEN-202ENST00000438066 SOGA1O94964 1423 aa9.69□□□□□ -0.86
SPEN-202ENST00000438066 FAM98CQ17RN3 349 aaKnown RBP9.68□□□□□ -0.86
SPEN-202ENST00000438066 DESI1Q6ICB0 168 aa9.68□□□□□ -0.86
SPEN-202ENST00000438066 TXNDC2Q86VQ3 553 aa9.68□□□□□ -0.86
SPEN-202ENST00000438066 CADPSQ9ULU8 1353 aa9.68□□□□□ -0.86
SPEN-202ENST00000438066 CUX1P39880 1505 aa9.68□□□□□ -0.86
SPEN-202ENST00000438066 USP17L5A8MUK1 530 aa9.68□□□□□ -0.86
SPEN-202ENST00000438066 LYPD8Q6UX82 237 aa9.68□□□□□ -0.86
SPEN-202ENST00000438066 SLC27A5Q9Y2P5 690 aa9.68□□□□□ -0.86
SPEN-202ENST00000438066 HOXB1P14653 301 aaPredicted RBP9.67□□□□□ -0.86
SPEN-202ENST00000438066 NFATC2IPQ8NCF5 419 aa9.67□□□□□ -0.86
SPEN-202ENST00000438066 CRTC2Q53ET0 693 aaPredicted RBP9.66□□□□□ -0.86
SPEN-202ENST00000438066 MORN1Q5T089 497 aa9.66□□□□□ -0.86
SPEN-202ENST00000438066 FAM174AQ8TBP5 190 aa9.66□□□□□ -0.86
SPEN-202ENST00000438066 FKBPLQ9UIM3 349 aa9.66□□□□□ -0.86
SPEN-202ENST00000438066 RUSC2Q8N2Y8 1516 aa9.66□□□□□ -0.86
SPEN-202ENST00000438066 USP17L15C9J2P7 530 aa9.65□□□□□ -0.87
SPEN-202ENST00000438066 USP17L10C9JJH3 530 aa9.65□□□□□ -0.87
SPEN-202ENST00000438066 USP17L13C9JLJ4 530 aa9.65□□□□□ -0.87
SPEN-202ENST00000438066 USP17L12C9JPN9 530 aa9.65□□□□□ -0.87
SPEN-202ENST00000438066 USP17L11C9JVI0 530 aa9.65□□□□□ -0.87
SPEN-202ENST00000438066 USP17L21D6R901 530 aa9.65□□□□□ -0.87
SPEN-202ENST00000438066 USP17L18D6R9N7 530 aa9.65□□□□□ -0.87
SPEN-202ENST00000438066 USP17L22D6RA61 530 aa9.65□□□□□ -0.87
SPEN-202ENST00000438066 USP17L17D6RBQ6 530 aa9.65□□□□□ -0.87
SPEN-202ENST00000438066 USP17L19D6RCP7 530 aa9.65□□□□□ -0.87
SPEN-202ENST00000438066 USP17L20D6RJB6 530 aa9.65□□□□□ -0.87
SPEN-202ENST00000438066 USP17L24Q0WX57 530 aa9.65□□□□□ -0.87
SPEN-202ENST00000438066 KMT5BQ4FZB7 885 aa9.65□□□□□ -0.87
SPEN-202ENST00000438066 MKRN1Q9UHC7 482 aaKnown RBP9.65□□□□□ -0.87
SPEN-202ENST00000438066 FAM196BA6NMK8 535 aa9.64□□□□□ -0.87
SPEN-202ENST00000438066 SSFA2P28290 1259 aa9.64□□□□□ -0.87
SPEN-202ENST00000438066 ARID4AP29374 1257 aaPredicted RBP9.64□□□□□ -0.87
SPEN-202ENST00000438066 Q3C1V9 767 aa9.64□□□□□ -0.87
SPEN-202ENST00000438066 PLEKHM2Q8IWE5 1019 aa9.64□□□□□ -0.87
SPEN-202ENST00000438066 SLAIN2Q9P270 581 aa9.64□□□□□ -0.87
SPEN-202ENST00000438066 RBM47A0AV96 593 aaKnown RBP9.63□□□□□ -0.87
SPEN-202ENST00000438066 RNF19BQ6ZMZ0 732 aa9.63□□□□□ -0.87
SPEN-202ENST00000438066 KIF21BO75037 1637 aa9.63□□□□□ -0.87
SPEN-202ENST00000438066 POTEB2H3BUK9 544 aa9.62□□□□□ -0.87
SPEN-202ENST00000438066 RASA1P20936 1047 aa9.62□□□□□ -0.87
SPEN-202ENST00000438066 SCUBE2Q9NQ36 999 aa9.62□□□□□ -0.87
SPEN-202ENST00000438066 MAP10Q9P2G4 905 aa9.62□□□□□ -0.87
SPEN-202ENST00000438066 NCOA4Q13772 614 aa9.62□□□□□ -0.87
SPEN-202ENST00000438066 LARP1Q6PKG0 1096 aaKnown RBP9.62□□□□□ -0.87
SPEN-202ENST00000438066 LAMC3Q9Y6N6 1575 aa9.62□□□□□ -0.87
SPEN-202ENST00000438066 PTK7Q13308 1070 aa9.61□□□□□ -0.87
SPEN-202ENST00000438066 DMRTA1Q5VZB9 504 aa9.61□□□□□ -0.87
SPEN-202ENST00000438066 BLOC1S3Q6QNY0 202 aa9.61□□□□□ -0.87
SPEN-202ENST00000438066 DNAJC14Q6Y2X3 702 aaPredicted RBP9.61□□□□□ -0.87
SPEN-202ENST00000438066 FAM200AQ8TCP9 573 aa9.61□□□□□ -0.87
SPEN-202ENST00000438066 AXIN2Q9Y2T1 843 aa9.61□□□□□ -0.87
SPEN-202ENST00000438066 ARHGAP33O14559 1287 aa9.6□□□□□ -0.87
SPEN-202ENST00000438066 SERPINB4P48594 390 aa9.6□□□□□ -0.87
SPEN-202ENST00000438066 FAM69CQ0P6D2 419 aa9.6□□□□□ -0.87
SPEN-202ENST00000438066 SLFNL1Q499Z3 407 aa9.6□□□□□ -0.87
SPEN-202ENST00000438066 USP35Q9P2H5 1018 aa9.6□□□□□ -0.87
SPEN-202ENST00000438066 ACTN4O43707 911 aaKnown RBP9.59□□□□□ -0.87
SPEN-202ENST00000438066 F12P00748 615 aaPredicted RBP9.59□□□□□ -0.87
SPEN-202ENST00000438066 USB1Q9BQ65 265 aaKnown RBP9.59□□□□□ -0.87
SPEN-202ENST00000438066 FANCD2Q9BXW9 1451 aa9.59□□□□□ -0.87
SPEN-202ENST00000438066 POTEEQ6S8J3 1075 aa9.59□□□□□ -0.87
SPEN-202ENST00000438066 SLC4A5Q9BY07 1137 aa9.59□□□□□ -0.87
SPEN-202ENST00000438066 CEP126Q9P2H0 1117 aa9.59□□□□□ -0.87
SPEN-202ENST00000438066 NESP48681 1621 aa9.58□□□□□ -0.88
SPEN-202ENST00000438066 SOWAHDA6NJG2 315 aa9.58□□□□□ -0.88
SPEN-202ENST00000438066 SCNN1AP37088 669 aa9.58□□□□□ -0.88
SPEN-202ENST00000438066 GOLGA3Q08378 1498 aa9.58□□□□□ -0.88
SPEN-202ENST00000438066 ATP5J2-PTCD1G3V325 749 aa9.57□□□□□ -0.88
SPEN-202ENST00000438066 SNPHO15079 494 aa9.57□□□□□ -0.88
SPEN-202ENST00000438066 CTHP32929 405 aa9.57□□□□□ -0.88
SPEN-202ENST00000438066 KCNH2Q12809 1159 aa9.57□□□□□ -0.88
SPEN-202ENST00000438066 RNF135Q8IUD6 432 aa9.57□□□□□ -0.88
SPEN-202ENST00000438066 CLP1Q92989 425 aaKnown RBP9.57□□□□□ -0.88
SPEN-202ENST00000438066 MRRFQ96E11 262 aaKnown RBP9.57□□□□□ -0.88
SPEN-202ENST00000438066 VPS9D1Q9Y2B5 631 aa9.57□□□□□ -0.88
SPEN-202ENST00000438066 CEP164Q9UPV0 1460 aa9.57□□□□□ -0.88
SPEN-202ENST00000438066 ZC3H4Q9UPT8 1303 aaKnown RBP9.57□□□□□ -0.88
SPEN-202ENST00000438066 ATP2B4P23634 1241 aa9.56□□□□□ -0.88
SPEN-202ENST00000438066 NOM1Q5C9Z4 860 aaKnown RBP9.56□□□□□ -0.88
SPEN-202ENST00000438066 ANKMY2Q8IV38 441 aa9.56□□□□□ -0.88
SPEN-202ENST00000438066 PLPP7Q8NBV4 271 aa9.56□□□□□ -0.88
SPEN-202ENST00000438066 ZFRQ96KR1 1074 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms