RNA–Protein interactions for RNA: ENST00000437941.6

SSX2IP-203, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 2 BASIC

Gene SSX2IP, Length 5,843 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-203ENST00000437941 SNAPC4Q5SXM2 1469 aa26.72■■□□□ 1.87
SSX2IP-203ENST00000437941 RPGRIP1LQ68CZ1 1315 aa26.72■■□□□ 1.87
SSX2IP-203ENST00000437941 CDC45O75419 566 aa26.72■■□□□ 1.87
SSX2IP-203ENST00000437941 HDGFL1Q5TGJ6 251 aa26.72■■□□□ 1.87
SSX2IP-203ENST00000437941 TROQ12816 1431 aaPredicted RBP26.72■■□□□ 1.87
SSX2IP-203ENST00000437941 FOSBP53539 338 aa26.71■■□□□ 1.87
SSX2IP-203ENST00000437941 DNAJC2Q99543 621 aaKnown RBP26.71■■□□□ 1.87
SSX2IP-203ENST00000437941 ARID3AQ99856 593 aa26.71■■□□□ 1.87
SSX2IP-203ENST00000437941 CCAR2Q8N163 923 aaKnown RBP26.71■■□□□ 1.87
SSX2IP-203ENST00000437941 SLC12A5Q9H2X9 1139 aa26.71■■□□□ 1.87
SSX2IP-203ENST00000437941 CCAR1Q8IX12 1150 aaKnown RBP26.71■■□□□ 1.87
SSX2IP-203ENST00000437941 KRI1Q8N9T8 703 aaKnown RBP26.71■■□□□ 1.87
SSX2IP-203ENST00000437941 CCDC73Q6ZRK6 1079 aa26.71■■□□□ 1.87
SSX2IP-203ENST00000437941 CCDC158Q5M9N0 1113 aa26.69■■□□□ 1.86
SSX2IP-203ENST00000437941 NBPF1Q3BBV0 1214 aa26.69■■□□□ 1.86
SSX2IP-203ENST00000437941 HIP1O00291 1037 aa26.68■■□□□ 1.86
SSX2IP-203ENST00000437941 NUCB2P80303 420 aa26.68■■□□□ 1.86
SSX2IP-203ENST00000437941 EXOSC9Q06265 439 aaKnown RBP26.67■■□□□ 1.86
SSX2IP-203ENST00000437941 EFCAB5A4FU69 1503 aa26.67■■□□□ 1.86
SSX2IP-203ENST00000437941 ERICH3Q5RHP9 1530 aa26.67■■□□□ 1.86
SSX2IP-203ENST00000437941 HMGB2P26583 209 aaKnown RBP26.67■■□□□ 1.86
SSX2IP-203ENST00000437941 TTC39AQ5SRH9 613 aa26.67■■□□□ 1.86
SSX2IP-203ENST00000437941 CHMP5Q9NZZ3 219 aa26.67■■□□□ 1.86
SSX2IP-203ENST00000437941 GNAI2P04899 355 aa26.66■■□□□ 1.86
SSX2IP-203ENST00000437941 EHBP1L1Q8N3D4 1523 aa26.66■■□□□ 1.86
SSX2IP-203ENST00000437941 KIAA1107Q9UPP5 1409 aa26.65■■□□□ 1.86
SSX2IP-203ENST00000437941 SASS6Q6UVJ0 657 aa26.65■■□□□ 1.86
SSX2IP-203ENST00000437941 TOPBP1Q92547 1522 aa26.65■■□□□ 1.86
SSX2IP-203ENST00000437941 SLC4A2P04920 1241 aa26.64■■□□□ 1.85
SSX2IP-203ENST00000437941 C22orf23Q9BZE7 217 aa26.63■■□□□ 1.85
SSX2IP-203ENST00000437941 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.63■■□□□ 1.852e-8■□□□□ 8.2
SSX2IP-203ENST00000437941 ERBINQ96RT1 1412 aa26.62■■□□□ 1.85
SSX2IP-203ENST00000437941 CC2D2AQ9P2K1 1620 aa26.62■■□□□ 1.85
SSX2IP-203ENST00000437941 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.61■■□□□ 1.85
SSX2IP-203ENST00000437941 ANKRD30BQ9BXX2 1392 aa26.61■■□□□ 1.85
SSX2IP-203ENST00000437941 ATAD2Q6PL18 1390 aa26.61■■□□□ 1.85
SSX2IP-203ENST00000437941 MPHOSPH8Q99549 860 aa26.6■■□□□ 1.85
SSX2IP-203ENST00000437941 CCT4P50991 539 aaKnown RBP26.6■■□□□ 1.85
SSX2IP-203ENST00000437941 SRCIN1Q9C0H9 1055 aa26.59■■□□□ 1.85
SSX2IP-203ENST00000437941 RRP12Q5JTH9 1297 aaKnown RBP26.59■■□□□ 1.85
SSX2IP-203ENST00000437941 CT47A1Q5JQC4 288 aaPredicted RBP26.58■■□□□ 1.85
SSX2IP-203ENST00000437941 XPCQ01831 940 aaPredicted RBP26.57■■□□□ 1.84
SSX2IP-203ENST00000437941 POLA1P09884 1462 aaPredicted RBP26.57■■□□□ 1.84
SSX2IP-203ENST00000437941 MYL6BP14649 208 aa26.57■■□□□ 1.84
SSX2IP-203ENST00000437941 CCDC57Q2TAC2 916 aa26.57■■□□□ 1.84
SSX2IP-203ENST00000437941 HECW1Q76N89 1606 aa26.56■■□□□ 1.84
SSX2IP-203ENST00000437941 ARAP1Q96P48 1450 aa26.56■■□□□ 1.84
SSX2IP-203ENST00000437941 KCNH5Q8NCM2 988 aa26.56■■□□□ 1.84
SSX2IP-203ENST00000437941 EPS15P42566 896 aa26.56■■□□□ 1.84
SSX2IP-203ENST00000437941 NACAP1Q9BZK3 213 aa26.56■■□□□ 1.84
SSX2IP-203ENST00000437941 ZC3H6P61129 1189 aaKnown RBP26.55■■□□□ 1.84
SSX2IP-203ENST00000437941 OLFM4Q6UX06 510 aa26.54■■□□□ 1.84
SSX2IP-203ENST00000437941 GCC1Q96CN9 775 aa26.54■■□□□ 1.84
SSX2IP-203ENST00000437941 ODF2Q5BJF6 829 aa26.54■■□□□ 1.84
SSX2IP-203ENST00000437941 ATP2B2Q01814 1243 aa26.54■■□□□ 1.84
SSX2IP-203ENST00000437941 GPS2Q13227 327 aa26.53■■□□□ 1.84
SSX2IP-203ENST00000437941 TMEM132AQ24JP5 1023 aa26.53■■□□□ 1.84
SSX2IP-203ENST00000437941 KDM4AO75164 1064 aa26.53■■□□□ 1.84
SSX2IP-203ENST00000437941 WWC2Q6AWC2 1192 aa26.53■■□□□ 1.84
SSX2IP-203ENST00000437941 HOMER1Q86YM7 354 aa26.53■■□□□ 1.84
SSX2IP-203ENST00000437941 NOB1Q9ULX3 412 aaKnown RBP26.53■■□□□ 1.84
SSX2IP-203ENST00000437941 BTBD11A6QL63 1104 aa26.53■■□□□ 1.84
SSX2IP-203ENST00000437941 ZNF592Q92610 1267 aa26.53■■□□□ 1.84
SSX2IP-203ENST00000437941 TSR2Q969E8 191 aaKnown RBP26.52■■□□□ 1.84
SSX2IP-203ENST00000437941 CCDC61Q9Y6R9 512 aa26.52■■□□□ 1.84
SSX2IP-203ENST00000437941 RBM5P52756 815 aaKnown RBP eCLIP26.52■■□□□ 1.84
SSX2IP-203ENST00000437941 CDK5RAP3Q96JB5 506 aa26.52■■□□□ 1.84
SSX2IP-203ENST00000437941 OFD1O75665 1012 aa26.51■■□□□ 1.83
SSX2IP-203ENST00000437941 NUDT16Q96DE0 195 aaKnown RBP26.51■■□□□ 1.83
SSX2IP-203ENST00000437941 SDF4Q9BRK5 362 aa26.51■■□□□ 1.83
SSX2IP-203ENST00000437941 RRS1Q15050 365 aaKnown RBP26.51■■□□□ 1.83
SSX2IP-203ENST00000437941 NAP1L1P55209 391 aaKnown RBP26.51■■□□□ 1.83
SSX2IP-203ENST00000437941 SIL1Q9H173 461 aa26.5■■□□□ 1.83
SSX2IP-203ENST00000437941 ZSCAN25Q6NSZ9 544 aa26.5■■□□□ 1.83
SSX2IP-203ENST00000437941 NAT10Q9H0A0 1025 aaKnown RBP26.5■■□□□ 1.83
SSX2IP-203ENST00000437941 ATP2B1P20020 1258 aa26.5■■□□□ 1.83
SSX2IP-203ENST00000437941 C1orf115Q9H7X2 142 aa26.5■■□□□ 1.83
SSX2IP-203ENST00000437941 CT47B1P0C2W7 299 aaPredicted RBP26.49■■□□□ 1.83
SSX2IP-203ENST00000437941 CDCA7LQ96GN5 454 aa26.49■■□□□ 1.83
SSX2IP-203ENST00000437941 TXLNAP40222 546 aa26.48■■□□□ 1.83
SSX2IP-203ENST00000437941 STARD3NLO95772 234 aa26.48■■□□□ 1.83
SSX2IP-203ENST00000437941 PDCP20941 246 aa26.47■■□□□ 1.83
SSX2IP-203ENST00000437941 WDR63Q8IWG1 891 aa26.47■■□□□ 1.83
SSX2IP-203ENST00000437941 CD109Q6YHK3 1445 aa26.47■■□□□ 1.83
SSX2IP-203ENST00000437941 PDE3AQ14432 1141 aa26.47■■□□□ 1.83
SSX2IP-203ENST00000437941 LRRCC1Q9C099 1032 aa26.47■■□□□ 1.83
SSX2IP-203ENST00000437941 HMGXB3Q12766 1538 aa26.47■■□□□ 1.83
SSX2IP-203ENST00000437941 TNNT3P45378 269 aaPredicted RBP26.47■■□□□ 1.83
SSX2IP-203ENST00000437941 GSE1Q14687 1217 aa26.46■■□□□ 1.83
SSX2IP-203ENST00000437941 KIAA0586Q9BVV6 1533 aa26.46■■□□□ 1.83
SSX2IP-203ENST00000437941 SYNJ1O43426 1573 aa26.46■■□□□ 1.83
SSX2IP-203ENST00000437941 MCM2P49736 904 aa26.46■■□□□ 1.83
SSX2IP-203ENST00000437941 DAPK1P53355 1430 aa26.45■■□□□ 1.83
SSX2IP-203ENST00000437941 BICDL1Q6ZP65 573 aa26.45■■□□□ 1.82
SSX2IP-203ENST00000437941 CEP126Q9P2H0 1117 aa26.45■■□□□ 1.82
SSX2IP-203ENST00000437941 NEK4P51957 841 aa26.44■■□□□ 1.82
SSX2IP-203ENST00000437941 FCHSD2O94868 740 aa26.44■■□□□ 1.82
SSX2IP-203ENST00000437941 KRT18P05783 430 aaKnown RBP26.43■■□□□ 1.82
SSX2IP-203ENST00000437941 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.43■■□□□ 1.821e-8■■■■■ 107.1
SSX2IP-203ENST00000437941 IGHMBP2P38935 993 aaKnown RBP26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 164.5 ms