RNA–Protein interactions for RNA: ENST00000437811.1

HLA-DPA1-243, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-243ENST00000437811 RBM33Q96EV2 1170 aaKnown RBP18.25■□□□□ 0.51
HLA-DPA1-243ENST00000437811 NCOA3Q9Y6Q9 1424 aa18.24■□□□□ 0.51
HLA-DPA1-243ENST00000437811 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.23■□□□□ 0.51
HLA-DPA1-243ENST00000437811 SSH2Q76I76 1423 aa18.23■□□□□ 0.51
HLA-DPA1-243ENST00000437811 C14orf37Q86TY3 774 aa18.22■□□□□ 0.51
HLA-DPA1-243ENST00000437811 TNNT2P45379 298 aaPredicted RBP18.21■□□□□ 0.51
HLA-DPA1-243ENST00000437811 TTC21BQ7Z4L5 1316 aa18.21■□□□□ 0.51
HLA-DPA1-243ENST00000437811 TMEM94Q12767 1356 aa18.21■□□□□ 0.51
HLA-DPA1-243ENST00000437811 BLMP54132 1417 aaPredicted RBP18.21■□□□□ 0.51
HLA-DPA1-243ENST00000437811 SHPRHQ149N8 1683 aa18.2■□□□□ 0.5
HLA-DPA1-243ENST00000437811 NME9Q86XW9 330 aa18.2■□□□□ 0.5
HLA-DPA1-243ENST00000437811 PMFBP1Q8TBY8 1022 aa18.2■□□□□ 0.5
HLA-DPA1-243ENST00000437811 DCCP43146 1447 aa18.19■□□□□ 0.5
HLA-DPA1-243ENST00000437811 NGDNQ8NEJ9 315 aaKnown RBP18.19■□□□□ 0.5
HLA-DPA1-243ENST00000437811 TTC21AQ8NDW8 1320 aa18.18■□□□□ 0.5
HLA-DPA1-243ENST00000437811 XIRP1Q702N8 1843 aaKnown RBP18.18■□□□□ 0.5
HLA-DPA1-243ENST00000437811 ZBED9Q6R2W3 1325 aa18.18■□□□□ 0.5
HLA-DPA1-243ENST00000437811 MTHFSP49914 203 aa18.17■□□□□ 0.5
HLA-DPA1-243ENST00000437811 WDR43Q15061 677 aaKnown RBP eCLIP18.17■□□□□ 0.5
HLA-DPA1-243ENST00000437811 C19orf44Q9H6X5 657 aa18.17■□□□□ 0.5
HLA-DPA1-243ENST00000437811 PHF8Q9UPP1 1060 aa18.17■□□□□ 0.5
HLA-DPA1-243ENST00000437811 OVOS2A0A0J9YW53 1432 aa18.17■□□□□ 0.5
HLA-DPA1-243ENST00000437811 OVOS2Q6IE36 1432 aa18.17■□□□□ 0.5
HLA-DPA1-243ENST00000437811 CFAP53Q96M91 514 aa18.17■□□□□ 0.5
HLA-DPA1-243ENST00000437811 KIF1AQ12756 1690 aa18.16■□□□□ 0.5
HLA-DPA1-243ENST00000437811 USP54Q70EL1 1684 aa18.16■□□□□ 0.5
HLA-DPA1-243ENST00000437811 COG3Q96JB2 828 aa18.16■□□□□ 0.5
HLA-DPA1-243ENST00000437811 ZRANB1Q9UGI0 708 aa18.16■□□□□ 0.5
HLA-DPA1-243ENST00000437811 COL3A1P02461 1466 aaPredicted RBP18.15■□□□□ 0.5
HLA-DPA1-243ENST00000437811 PIK3C2AO00443 1686 aa18.15■□□□□ 0.5
HLA-DPA1-243ENST00000437811 LRRC7Q96NW7 1537 aa18.15■□□□□ 0.5
HLA-DPA1-243ENST00000437811 C1orf167Q5SNV9 1468 aa18.15■□□□□ 0.5
HLA-DPA1-243ENST00000437811 SMG6Q86US8 1419 aaKnown RBP18.14■□□□□ 0.5
HLA-DPA1-243ENST00000437811 AATKQ6ZMQ8 1374 aa18.14■□□□□ 0.49
HLA-DPA1-243ENST00000437811 ADAMTS8Q9UP79 889 aa18.14■□□□□ 0.49
HLA-DPA1-243ENST00000437811 MST1RQ04912 1400 aa18.14■□□□□ 0.49
HLA-DPA1-243ENST00000437811 USP31Q70CQ4 1352 aa18.13■□□□□ 0.49
HLA-DPA1-243ENST00000437811 ZNF335Q9H4Z2 1342 aaPredicted RBP18.12■□□□□ 0.49
HLA-DPA1-243ENST00000437811 MSH6P52701 1360 aa18.12■□□□□ 0.49
HLA-DPA1-243ENST00000437811 MAP2P11137 1827 aaKnown RBP18.11■□□□□ 0.49
HLA-DPA1-243ENST00000437811 ATF3P18847 181 aa18.11■□□□□ 0.49
HLA-DPA1-243ENST00000437811 ESCO1Q5FWF5 840 aa18.11■□□□□ 0.49
HLA-DPA1-243ENST00000437811 PNPLA6Q8IY17 1366 aa18.11■□□□□ 0.49
HLA-DPA1-243ENST00000437811 MARF1Q9Y4F3 1742 aaKnown RBP18.11■□□□□ 0.49
HLA-DPA1-243ENST00000437811 CDK12Q9NYV4 1490 aaPredicted RBP18.1■□□□□ 0.49
HLA-DPA1-243ENST00000437811 ORAI2Q96SN7 254 aa18.09■□□□□ 0.49
HLA-DPA1-243ENST00000437811 POLKQ9UBT6 870 aa18.09■□□□□ 0.49
HLA-DPA1-243ENST00000437811 CADPS2Q86UW7 1296 aa18.08■□□□□ 0.49
HLA-DPA1-243ENST00000437811 TRPM3Q9HCF6 1732 aaPredicted RBP18.07■□□□□ 0.48
HLA-DPA1-243ENST00000437811 FBLN1P23142 703 aa18.05■□□□□ 0.48
HLA-DPA1-243ENST00000437811 EMILIN1Q9Y6C2 1016 aa18.05■□□□□ 0.48
HLA-DPA1-243ENST00000437811 PSME1Q06323 249 aa18.04■□□□□ 0.48
HLA-DPA1-243ENST00000437811 NUDCQ9Y266 331 aa18.04■□□□□ 0.48
HLA-DPA1-243ENST00000437811 PEAK1Q9H792 1746 aa18.03■□□□□ 0.48
HLA-DPA1-243ENST00000437811 SENP3-EIF4A1A0A087X0R7 540 aa18.03■□□□□ 0.48
HLA-DPA1-243ENST00000437811 DIAPH1O60610 1272 aaKnown RBP18.03■□□□□ 0.48
HLA-DPA1-243ENST00000437811 PAK3O75914 559 aaPredicted RBP18.02■□□□□ 0.47
HLA-DPA1-243ENST00000437811 NLRP6P59044 892 aa18.02■□□□□ 0.47
HLA-DPA1-243ENST00000437811 RRS1Q15050 365 aaKnown RBP18.02■□□□□ 0.47
HLA-DPA1-243ENST00000437811 CCDC146Q8IYE0 955 aa18.02■□□□□ 0.47
HLA-DPA1-243ENST00000437811 IQSEC2Q5JU85 1478 aa18.01■□□□□ 0.47
HLA-DPA1-243ENST00000437811 PPM1GO15355 546 aaPredicted RBP18.01■□□□□ 0.47
HLA-DPA1-243ENST00000437811 FOXO3O43524 673 aa18.01■□□□□ 0.47
HLA-DPA1-243ENST00000437811 ABTB2Q8N961 1025 aa18.01■□□□□ 0.47
HLA-DPA1-243ENST00000437811 ALS2Q96Q42 1657 aa18■□□□□ 0.47
HLA-DPA1-243ENST00000437811 NPM3O75607 178 aaKnown RBP18■□□□□ 0.47
HLA-DPA1-243ENST00000437811 U2AF1L5P0DN76 240 aaPredicted RBP17.99■□□□□ 0.47
HLA-DPA1-243ENST00000437811 U2AF1Q01081 240 aaKnown RBP eCLIP17.99■□□□□ 0.47
HLA-DPA1-243ENST00000437811 KRT28Q7Z3Y7 464 aa17.99■□□□□ 0.47
HLA-DPA1-243ENST00000437811 RUNDC1Q96C34 613 aa17.99■□□□□ 0.47
HLA-DPA1-243ENST00000437811 U2SURPO15042 1029 aaKnown RBP17.98■□□□□ 0.47
HLA-DPA1-243ENST00000437811 NUTM2GQ5VZR2 741 aa17.98■□□□□ 0.47
HLA-DPA1-243ENST00000437811 POTEDQ86YR6 584 aa17.98■□□□□ 0.47
HLA-DPA1-243ENST00000437811 SLIT3O75094 1523 aa17.98■□□□□ 0.47
HLA-DPA1-243ENST00000437811 NFAT5O94916 1531 aa17.98■□□□□ 0.47
HLA-DPA1-243ENST00000437811 SBNO1A3KN83 1393 aa17.97■□□□□ 0.47
HLA-DPA1-243ENST00000437811 PDE3BQ13370 1112 aa17.97■□□□□ 0.47
HLA-DPA1-243ENST00000437811 MAP3K19Q56UN5 1328 aa17.97■□□□□ 0.47
HLA-DPA1-243ENST00000437811 LTBP4Q8N2S1 1624 aa17.97■□□□□ 0.47
HLA-DPA1-243ENST00000437811 NGEFQ8N5V2 710 aa17.97■□□□□ 0.47
HLA-DPA1-243ENST00000437811 SALL2Q9Y467 1007 aaPredicted RBP17.97■□□□□ 0.47
HLA-DPA1-243ENST00000437811 PXDNQ92626 1479 aa17.96■□□□□ 0.47
HLA-DPA1-243ENST00000437811 KIF24Q5T7B8 1368 aa17.96■□□□□ 0.47
HLA-DPA1-243ENST00000437811 NPHP3Q7Z494 1330 aa17.96■□□□□ 0.47
HLA-DPA1-243ENST00000437811 APAF1O14727 1248 aa17.96■□□□□ 0.47
HLA-DPA1-243ENST00000437811 IL13P35225 146 aa17.96■□□□□ 0.47
HLA-DPA1-243ENST00000437811 XPCQ01831 940 aaPredicted RBP17.96■□□□□ 0.47
HLA-DPA1-243ENST00000437811 FLT4P35916 1363 aa17.95■□□□□ 0.46
HLA-DPA1-243ENST00000437811 SOX12O15370 315 aa17.95■□□□□ 0.46
HLA-DPA1-243ENST00000437811 ZNF521Q96K83 1311 aa17.94■□□□□ 0.46
HLA-DPA1-243ENST00000437811 LTN1O94822 1766 aa17.94■□□□□ 0.46
HLA-DPA1-243ENST00000437811 RGPD1P0DJD0 1748 aa17.94■□□□□ 0.46
HLA-DPA1-243ENST00000437811 USP19O94966 1318 aa17.93■□□□□ 0.46
HLA-DPA1-243ENST00000437811 PHRF1Q9P1Y6 1649 aaKnown RBP17.93■□□□□ 0.46
HLA-DPA1-243ENST00000437811 BRINP3Q76B58 766 aa17.93■□□□□ 0.46
HLA-DPA1-243ENST00000437811 RTL1A6NKG5 1358 aa17.93■□□□□ 0.46
HLA-DPA1-243ENST00000437811 SLAIN2Q9P270 581 aa17.92■□□□□ 0.46
HLA-DPA1-243ENST00000437811 GTF3C3Q9Y5Q9 886 aa17.92■□□□□ 0.46
HLA-DPA1-243ENST00000437811 TNS3Q68CZ2 1445 aa17.92■□□□□ 0.46
HLA-DPA1-243ENST00000437811 EIF4A2Q14240 407 aaKnown RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms