RNA–Protein interactions for RNA: ENST00000437800.6

CD4-202, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 2,117 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-202ENST00000437800 CPSF1Q10570 1443 aaKnown RBP19.72■□□□□ 0.75
CD4-202ENST00000437800 CC2D1BQ5T0F9 858 aaKnown RBP19.72■□□□□ 0.75
CD4-202ENST00000437800 PMFBP1Q8TBY8 1022 aa19.72■□□□□ 0.75
CD4-202ENST00000437800 TERF2IPQ9NYB0 399 aa19.72■□□□□ 0.75
CD4-202ENST00000437800 HDGFL2Q7Z4V5 671 aaPredicted RBP19.71■□□□□ 0.75
CD4-202ENST00000437800 KIF20BQ96Q89 1820 aa19.71■□□□□ 0.75
CD4-202ENST00000437800 BRD4O60885 1362 aaPredicted RBP19.71■□□□□ 0.75
CD4-202ENST00000437800 ATF3P18847 181 aa19.7■□□□□ 0.74
CD4-202ENST00000437800 C1orf167Q5SNV9 1468 aa19.7■□□□□ 0.74
CD4-202ENST00000437800 ACEP12821 1306 aa19.7■□□□□ 0.74
CD4-202ENST00000437800 NPC1L1Q9UHC9 1359 aa19.7■□□□□ 0.74
CD4-202ENST00000437800 PNISRQ8TF01 805 aaKnown RBP19.69■□□□□ 0.74
CD4-202ENST00000437800 PLEKHG3A1L390 1219 aa19.69■□□□□ 0.74
CD4-202ENST00000437800 NLRP13Q86W25 1043 aa19.68■□□□□ 0.74
CD4-202ENST00000437800 ESCO1Q5FWF5 840 aa19.67■□□□□ 0.74
CD4-202ENST00000437800 POLR3AO14802 1390 aaPredicted RBP19.67■□□□□ 0.74
CD4-202ENST00000437800 ORAI2Q96SN7 254 aa19.67■□□□□ 0.74
CD4-202ENST00000437800 KIF1AQ12756 1690 aa19.67■□□□□ 0.74
CD4-202ENST00000437800 USP6P35125 1406 aa19.66■□□□□ 0.74
CD4-202ENST00000437800 UBE2Q2Q8WVN8 375 aa19.66■□□□□ 0.74
CD4-202ENST00000437800 ANKRD26Q9UPS8 1709 aa19.66■□□□□ 0.74
CD4-202ENST00000437800 EDC4Q6P2E9 1401 aaKnown RBP19.66■□□□□ 0.74
CD4-202ENST00000437800 CADPS2Q86UW7 1296 aa19.66■□□□□ 0.74
CD4-202ENST00000437800 NGDNQ8NEJ9 315 aaKnown RBP19.66■□□□□ 0.74
CD4-202ENST00000437800 PHF8Q9UPP1 1060 aa19.66■□□□□ 0.74
CD4-202ENST00000437800 RNF123Q5XPI4 1314 aa19.65■□□□□ 0.74
CD4-202ENST00000437800 IRX6P78412 446 aaPredicted RBP19.65■□□□□ 0.74
CD4-202ENST00000437800 CGNL1Q0VF96 1302 aa19.65■□□□□ 0.74
CD4-202ENST00000437800 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.64■□□□□ 0.74
CD4-202ENST00000437800 NUDCQ9Y266 331 aa19.64■□□□□ 0.73
CD4-202ENST00000437800 PIK3C2AO00443 1686 aa19.61■□□□□ 0.73
CD4-202ENST00000437800 SSH2Q76I76 1423 aa19.61■□□□□ 0.73
CD4-202ENST00000437800 ZNF692Q9BU19 519 aaPredicted RBP19.6■□□□□ 0.73
CD4-202ENST00000437800 GGNBP2Q9H3C7 697 aa19.6■□□□□ 0.73
CD4-202ENST00000437800 NME9Q86XW9 330 aa19.6■□□□□ 0.73
CD4-202ENST00000437800 PPP2R1AP30153 589 aa19.59■□□□□ 0.73
CD4-202ENST00000437800 NSD2O96028 1365 aa19.59■□□□□ 0.73
CD4-202ENST00000437800 FYB1O15117 783 aa19.58■□□□□ 0.73
CD4-202ENST00000437800 XPCQ01831 940 aaPredicted RBP19.58■□□□□ 0.73
CD4-202ENST00000437800 TTC21BQ7Z4L5 1316 aa19.58■□□□□ 0.73
CD4-202ENST00000437800 SALL2Q9Y467 1007 aaPredicted RBP19.58■□□□□ 0.73
CD4-202ENST00000437800 TRPM3Q9HCF6 1732 aaPredicted RBP19.58■□□□□ 0.72
CD4-202ENST00000437800 FOXO3O43524 673 aa19.58■□□□□ 0.72
CD4-202ENST00000437800 ZRANB1Q9UGI0 708 aa19.57■□□□□ 0.72
CD4-202ENST00000437800 DDX17Q92841 729 aaKnown RBP19.57■□□□□ 0.72
CD4-202ENST00000437800 TNNT2P45379 298 aaPredicted RBP19.56■□□□□ 0.72
CD4-202ENST00000437800 SLAIN2Q9P270 581 aa19.56■□□□□ 0.72
CD4-202ENST00000437800 MARF1Q9Y4F3 1742 aaKnown RBP19.56■□□□□ 0.72
CD4-202ENST00000437800 INSRP06213 1382 aa19.56■□□□□ 0.72
CD4-202ENST00000437800 BRINP3Q76B58 766 aa19.55■□□□□ 0.72
CD4-202ENST00000437800 MORC1Q86VD1 984 aa19.55■□□□□ 0.72
CD4-202ENST00000437800 ROBO1Q9Y6N7 1651 aa19.54■□□□□ 0.72
CD4-202ENST00000437800 PSME1Q06323 249 aa19.54■□□□□ 0.72
CD4-202ENST00000437800 OVOS2A0A0J9YW53 1432 aa19.53■□□□□ 0.72
CD4-202ENST00000437800 OVOS2Q6IE36 1432 aa19.53■□□□□ 0.72
CD4-202ENST00000437800 PAK3O75914 559 aaPredicted RBP19.53■□□□□ 0.72
CD4-202ENST00000437800 TTC21AQ8NDW8 1320 aa19.52■□□□□ 0.72
CD4-202ENST00000437800 NHSL1Q5SYE7 1610 aa19.52■□□□□ 0.72
CD4-202ENST00000437800 PXDNQ92626 1479 aa19.52■□□□□ 0.71
CD4-202ENST00000437800 USP54Q70EL1 1684 aa19.51■□□□□ 0.71
CD4-202ENST00000437800 ALS2Q96Q42 1657 aa19.5■□□□□ 0.71
CD4-202ENST00000437800 NUTM2GQ5VZR2 741 aa19.5■□□□□ 0.71
CD4-202ENST00000437800 NPHP3Q7Z494 1330 aa19.49■□□□□ 0.71
CD4-202ENST00000437800 B4GALNT3Q6L9W6 998 aa19.49■□□□□ 0.71
CD4-202ENST00000437800 KRT28Q7Z3Y7 464 aa19.49■□□□□ 0.71
CD4-202ENST00000437800 COG3Q96JB2 828 aa19.49■□□□□ 0.71
CD4-202ENST00000437800 FBLN1P23142 703 aa19.47■□□□□ 0.71
CD4-202ENST00000437800 NOP58Q9Y2X3 529 aaKnown RBP19.47■□□□□ 0.71
CD4-202ENST00000437800 MAP2P11137 1827 aaKnown RBP19.47■□□□□ 0.71
CD4-202ENST00000437800 ABTB2Q8N961 1025 aa19.46■□□□□ 0.71
CD4-202ENST00000437800 PDE3BQ13370 1112 aa19.46■□□□□ 0.71
CD4-202ENST00000437800 USP31Q70CQ4 1352 aa19.46■□□□□ 0.71
CD4-202ENST00000437800 SOX12O15370 315 aa19.45■□□□□ 0.7
CD4-202ENST00000437800 NLRP6P59044 892 aa19.45■□□□□ 0.7
CD4-202ENST00000437800 LMOD2Q6P5Q4 547 aa19.45■□□□□ 0.7
CD4-202ENST00000437800 TNS3Q68CZ2 1445 aa19.44■□□□□ 0.7
CD4-202ENST00000437800 IQSEC2Q5JU85 1478 aa19.44■□□□□ 0.7
CD4-202ENST00000437800 BLMP54132 1417 aaPredicted RBP19.44■□□□□ 0.7
CD4-202ENST00000437800 PLEKHG5O94827 1062 aa19.43■□□□□ 0.7
CD4-202ENST00000437800 AHDC1Q5TGY3 1603 aaPredicted RBP19.42■□□□□ 0.7
CD4-202ENST00000437800 SBNO1A3KN83 1393 aa19.42■□□□□ 0.7
CD4-202ENST00000437800 CERKQ8TCT0 537 aa19.42■□□□□ 0.7
CD4-202ENST00000437800 ADAMTS8Q9UP79 889 aa19.42■□□□□ 0.7
CD4-202ENST00000437800 UBAP1LF5GYI3 381 aa19.41■□□□□ 0.7
CD4-202ENST00000437800 PIP4K2BP78356 416 aa19.41■□□□□ 0.7
CD4-202ENST00000437800 PEAK1Q9H792 1746 aa19.41■□□□□ 0.7
CD4-202ENST00000437800 CRYBG1Q9Y4K1 1723 aa19.41■□□□□ 0.7
CD4-202ENST00000437800 SOS2Q07890 1332 aaPredicted RBP19.41■□□□□ 0.7
CD4-202ENST00000437800 MED1Q15648 1581 aaPredicted RBP19.4■□□□□ 0.7
CD4-202ENST00000437800 MTHFSP49914 203 aa19.4■□□□□ 0.7
CD4-202ENST00000437800 RRS1Q15050 365 aaKnown RBP19.4■□□□□ 0.7
CD4-202ENST00000437800 SHPRHQ149N8 1683 aa19.4■□□□□ 0.7
CD4-202ENST00000437800 PHRF1Q9P1Y6 1649 aaKnown RBP19.4■□□□□ 0.7
CD4-202ENST00000437800 NFAT5O94916 1531 aa19.4■□□□□ 0.7
CD4-202ENST00000437800 SENP3-EIF4A1A0A087X0R7 540 aa19.4■□□□□ 0.7
CD4-202ENST00000437800 EMILIN1Q9Y6C2 1016 aa19.4■□□□□ 0.7
CD4-202ENST00000437800 LTN1O94822 1766 aa19.39■□□□□ 0.7
CD4-202ENST00000437800 SLIT3O75094 1523 aa19.39■□□□□ 0.7
CD4-202ENST00000437800 PHLPP1O60346 1717 aa19.39■□□□□ 0.7
CD4-202ENST00000437800 TOM1O60784 492 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms