RNA–Protein interactions for RNA: ENST00000436786.1

LINC01239-202, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 2 BASIC

Gene LINC01239, Length 2,347 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-202ENST00000436786 VGFO15240 615 aaPredicted RBP6.67□□□□□ -1.34
LINC01239-202ENST00000436786 LRRC59Q96AG4 307 aaKnown RBP6.67□□□□□ -1.34
LINC01239-202ENST00000436786 AFF2P51816 1311 aa6.67□□□□□ -1.34
LINC01239-202ENST00000436786 RXRBP28702 533 aa6.67□□□□□ -1.34
LINC01239-202ENST00000436786 UPF1Q92900 1129 aaKnown RBP eCLIP6.66□□□□□ -1.34
LINC01239-202ENST00000436786 ROBO2Q9HCK4 1378 aa6.66□□□□□ -1.34
LINC01239-202ENST00000436786 RPGRIP1LQ68CZ1 1315 aa6.66□□□□□ -1.34
LINC01239-202ENST00000436786 C8orf37Q96NL8 207 aa6.66□□□□□ -1.34
LINC01239-202ENST00000436786 NHSL1Q5SYE7 1610 aa6.66□□□□□ -1.34
LINC01239-202ENST00000436786 PNPLA6Q8IY17 1366 aa6.66□□□□□ -1.34
LINC01239-202ENST00000436786 NALCNQ8IZF0 1738 aa6.66□□□□□ -1.34
LINC01239-202ENST00000436786 C1orf167Q5SNV9 1468 aa6.66□□□□□ -1.34
LINC01239-202ENST00000436786 HFM1A2PYH4 1435 aa6.65□□□□□ -1.34
LINC01239-202ENST00000436786 ORAI2Q96SN7 254 aa6.65□□□□□ -1.34
LINC01239-202ENST00000436786 KIF1BO60333 1816 aa6.65□□□□□ -1.34
LINC01239-202ENST00000436786 PTCH1Q13635 1447 aa6.64□□□□□ -1.35
LINC01239-202ENST00000436786 ADAMTS2O95450 1211 aa6.64□□□□□ -1.35
LINC01239-202ENST00000436786 QTRT2Q9H974 415 aaKnown RBP6.64□□□□□ -1.35
LINC01239-202ENST00000436786 NGLY1Q96IV0 654 aa6.64□□□□□ -1.35
LINC01239-202ENST00000436786 SOS2Q07890 1332 aaPredicted RBP6.63□□□□□ -1.35
LINC01239-202ENST00000436786 CDK12Q9NYV4 1490 aaPredicted RBP6.63□□□□□ -1.35
LINC01239-202ENST00000436786 ADGRF5Q8IZF2 1346 aa6.63□□□□□ -1.35
LINC01239-202ENST00000436786 RBM6P78332 1123 aaKnown RBP6.62□□□□□ -1.35
LINC01239-202ENST00000436786 RGL3Q3MIN7 710 aa6.62□□□□□ -1.35
LINC01239-202ENST00000436786 PRAG1Q86YV5 1406 aa6.62□□□□□ -1.35
LINC01239-202ENST00000436786 ERBB3P21860 1342 aa6.62□□□□□ -1.35
LINC01239-202ENST00000436786 STK26Q9P289 416 aa6.62□□□□□ -1.35
LINC01239-202ENST00000436786 LAMC1P11047 1609 aa6.62□□□□□ -1.35
LINC01239-202ENST00000436786 RGS12O14924 1447 aa6.61□□□□□ -1.35
LINC01239-202ENST00000436786 PPLO60437 1756 aa6.61□□□□□ -1.35
LINC01239-202ENST00000436786 ESCO1Q5FWF5 840 aa6.61□□□□□ -1.35
LINC01239-202ENST00000436786 WAPLQ7Z5K2 1190 aa6.61□□□□□ -1.35
LINC01239-202ENST00000436786 MPHOSPH9Q99550 1183 aa6.61□□□□□ -1.35
LINC01239-202ENST00000436786 USP21Q9UK80 565 aa6.61□□□□□ -1.35
LINC01239-202ENST00000436786 CCDC144AA2RUR9 1427 aa6.6□□□□□ -1.35
LINC01239-202ENST00000436786 SPATA31E1Q6ZUB1 1445 aa6.6□□□□□ -1.35
LINC01239-202ENST00000436786 XPCQ01831 940 aaPredicted RBP6.6□□□□□ -1.35
LINC01239-202ENST00000436786 TMEM132EQ6IEE7 984 aa6.6□□□□□ -1.35
LINC01239-202ENST00000436786 NUTM2FA1L443 756 aa6.6□□□□□ -1.35
LINC01239-202ENST00000436786 FOXO3O43524 673 aa6.6□□□□□ -1.35
LINC01239-202ENST00000436786 FNBP4Q8N3X1 1017 aaPredicted RBP6.6□□□□□ -1.35
LINC01239-202ENST00000436786 LRPPRCP42704 1394 aaKnown RBP6.6□□□□□ -1.35
LINC01239-202ENST00000436786 PLEKHH1Q9ULM0 1364 aa6.6□□□□□ -1.35
LINC01239-202ENST00000436786 TRPC5Q9UL62 973 aaPredicted RBP6.59□□□□□ -1.35
LINC01239-202ENST00000436786 NPHP3Q7Z494 1330 aa6.59□□□□□ -1.35
LINC01239-202ENST00000436786 ANKRD30BQ9BXX2 1392 aa6.59□□□□□ -1.35
LINC01239-202ENST00000436786 CDC42BPGQ6DT37 1551 aa6.59□□□□□ -1.35
LINC01239-202ENST00000436786 HOXB1P14653 301 aaPredicted RBP6.59□□□□□ -1.36
LINC01239-202ENST00000436786 ZNF710Q8N1W2 664 aa6.59□□□□□ -1.36
LINC01239-202ENST00000436786 ABCC11Q96J66 1382 aa6.59□□□□□ -1.36
LINC01239-202ENST00000436786 TECPR2O15040 1411 aa6.58□□□□□ -1.36
LINC01239-202ENST00000436786 PXDNQ92626 1479 aa6.58□□□□□ -1.36
LINC01239-202ENST00000436786 COL22A1Q8NFW1 1626 aaPredicted RBP6.58□□□□□ -1.36
LINC01239-202ENST00000436786 RASEFQ8IZ41 740 aa6.58□□□□□ -1.36
LINC01239-202ENST00000436786 PLA2G2EQ9NZK7 142 aa6.58□□□□□ -1.36
LINC01239-202ENST00000436786 ATRNO75882 1429 aa6.58□□□□□ -1.36
LINC01239-202ENST00000436786 MYOM2P54296 1465 aa6.58□□□□□ -1.36
LINC01239-202ENST00000436786 PIK3C2GO75747 1445 aa6.57□□□□□ -1.36
LINC01239-202ENST00000436786 BCL9LQ86UU0 1499 aa6.57□□□□□ -1.36
LINC01239-202ENST00000436786 YTHDC2Q9H6S0 1430 aaKnown RBP6.57□□□□□ -1.36
LINC01239-202ENST00000436786 ATAD2Q6PL18 1390 aa6.57□□□□□ -1.36
LINC01239-202ENST00000436786 IFNL1Q8IU54 200 aa6.57□□□□□ -1.36
LINC01239-202ENST00000436786 C14orf93Q9H972 538 aaKnown RBP6.57□□□□□ -1.36
LINC01239-202ENST00000436786 SIRT1Q96EB6 747 aa6.56□□□□□ -1.36
LINC01239-202ENST00000436786 IFT172Q9UG01 1749 aa6.56□□□□□ -1.36
LINC01239-202ENST00000436786 SPATA31A3Q5VYP0 1347 aa6.56□□□□□ -1.36
LINC01239-202ENST00000436786 DOK7Q18PE1 504 aa6.56□□□□□ -1.36
LINC01239-202ENST00000436786 CFAP70Q5T0N1 1121 aa6.56□□□□□ -1.36
LINC01239-202ENST00000436786 KRT28Q7Z3Y7 464 aa6.56□□□□□ -1.36
LINC01239-202ENST00000436786 RIMBP2O15034 1052 aa6.55□□□□□ -1.36
LINC01239-202ENST00000436786 GJD4Q96KN9 370 aaPredicted RBP6.55□□□□□ -1.36
LINC01239-202ENST00000436786 SAFB2Q14151 953 aaKnown RBP eCLIP6.55□□□□□ -1.36
LINC01239-202ENST00000436786 PHF8Q9UPP1 1060 aa6.55□□□□□ -1.36
LINC01239-202ENST00000436786 KNDC1Q76NI1 1749 aa6.55□□□□□ -1.36
LINC01239-202ENST00000436786 FMN2Q9NZ56 1722 aa6.55□□□□□ -1.36
LINC01239-202ENST00000436786 DHX57Q6P158 1386 aaKnown RBP6.54□□□□□ -1.36
LINC01239-202ENST00000436786 RGS20O76081 388 aa6.54□□□□□ -1.36
LINC01239-202ENST00000436786 UNC5CLQ8IV45 518 aa6.54□□□□□ -1.36
LINC01239-202ENST00000436786 PRAM1Q96QH2 718 aa6.54□□□□□ -1.36
LINC01239-202ENST00000436786 ZBTB47Q9UFB7 747 aaPredicted RBP6.54□□□□□ -1.36
LINC01239-202ENST00000436786 NRXN1Q9ULB1 1477 aa6.54□□□□□ -1.36
LINC01239-202ENST00000436786 CABLES1Q8TDN4 633 aa6.54□□□□□ -1.36
LINC01239-202ENST00000436786 MARF1Q9Y4F3 1742 aaKnown RBP6.53□□□□□ -1.36
LINC01239-202ENST00000436786 ACIN1Q9UKV3 1341 aaKnown RBP6.53□□□□□ -1.36
LINC01239-202ENST00000436786 PSME1Q06323 249 aa6.53□□□□□ -1.36
LINC01239-202ENST00000436786 SLIT2O94813 1529 aa6.53□□□□□ -1.36
LINC01239-202ENST00000436786 KIF1AQ12756 1690 aa6.53□□□□□ -1.36
LINC01239-202ENST00000436786 LMOD2Q6P5Q4 547 aa6.53□□□□□ -1.36
LINC01239-202ENST00000436786 CCDC125Q86Z20 511 aa6.53□□□□□ -1.36
LINC01239-202ENST00000436786 POGKQ9P215 609 aa6.53□□□□□ -1.36
LINC01239-202ENST00000436786 RALGAPBQ86X10 1494 aa6.52□□□□□ -1.37
LINC01239-202ENST00000436786 TNS3Q68CZ2 1445 aa6.52□□□□□ -1.37
LINC01239-202ENST00000436786 HAP1P54257 671 aaPredicted RBP6.52□□□□□ -1.37
LINC01239-202ENST00000436786 ZNF687Q8N1G0 1237 aa6.52□□□□□ -1.37
LINC01239-202ENST00000436786 PMFBP1Q8TBY8 1022 aa6.52□□□□□ -1.37
LINC01239-202ENST00000436786 SBNO1A3KN83 1393 aa6.52□□□□□ -1.37
LINC01239-202ENST00000436786 RAB3GAP2Q9H2M9 1393 aa6.52□□□□□ -1.37
LINC01239-202ENST00000436786 GLI3P10071 1580 aa6.52□□□□□ -1.37
LINC01239-202ENST00000436786 HIRIP3Q9BW71 556 aaPredicted RBP6.51□□□□□ -1.37
LINC01239-202ENST00000436786 TRAK1Q9UPV9 953 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms