RNA–Protein interactions for RNA: ENST00000436630.6

RPE-208, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 1,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-208ENST00000436630 SLAIN2Q9P270 581 aa18.29■□□□□ 0.52
RPE-208ENST00000436630 NPHP3Q7Z494 1330 aa18.28■□□□□ 0.52
RPE-208ENST00000436630 ORAI2Q96SN7 254 aa18.27■□□□□ 0.52
RPE-208ENST00000436630 PRKRIP1Q9H875 184 aaPredicted RBP18.27■□□□□ 0.52
RPE-208ENST00000436630 PIK3C2AO00443 1686 aa18.27■□□□□ 0.52
RPE-208ENST00000436630 ROBO1Q9Y6N7 1651 aa18.27■□□□□ 0.52
RPE-208ENST00000436630 TTC21BQ7Z4L5 1316 aa18.25■□□□□ 0.51
RPE-208ENST00000436630 AHDC1Q5TGY3 1603 aaPredicted RBP18.25■□□□□ 0.51
RPE-208ENST00000436630 BRINP3Q76B58 766 aa18.25■□□□□ 0.51
RPE-208ENST00000436630 TOM1O60784 492 aa18.24■□□□□ 0.51
RPE-208ENST00000436630 PSME1Q06323 249 aa18.24■□□□□ 0.51
RPE-208ENST00000436630 SBNO1A3KN83 1393 aa18.24■□□□□ 0.51
RPE-208ENST00000436630 PXDNQ92626 1479 aa18.24■□□□□ 0.51
RPE-208ENST00000436630 ALS2Q96Q42 1657 aa18.24■□□□□ 0.51
RPE-208ENST00000436630 CC2D1BQ5T0F9 858 aaKnown RBP18.23■□□□□ 0.51
RPE-208ENST00000436630 OVOS2A0A0J9YW53 1432 aa18.23■□□□□ 0.51
RPE-208ENST00000436630 OVOS2Q6IE36 1432 aa18.23■□□□□ 0.51
RPE-208ENST00000436630 USP31Q70CQ4 1352 aa18.22■□□□□ 0.51
RPE-208ENST00000436630 MYBBP1AQ9BQG0 1328 aaKnown RBP18.22■□□□□ 0.51
RPE-208ENST00000436630 FYB1O15117 783 aa18.21■□□□□ 0.51
RPE-208ENST00000436630 FOXO3O43524 673 aa18.21■□□□□ 0.51
RPE-208ENST00000436630 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.21■□□□□ 0.517e-7■□□□□ 9.5
RPE-208ENST00000436630 SCAF1Q9H7N4 1312 aaKnown RBP18.21■□□□□ 0.51
RPE-208ENST00000436630 MARF1Q9Y4F3 1742 aaKnown RBP18.2■□□□□ 0.5
RPE-208ENST00000436630 CCER2I3L3R5 266 aa18.2■□□□□ 0.5
RPE-208ENST00000436630 TNS3Q68CZ2 1445 aa18.2■□□□□ 0.5
RPE-208ENST00000436630 MED1Q15648 1581 aaPredicted RBP18.19■□□□□ 0.5
RPE-208ENST00000436630 MORC1Q86VD1 984 aa18.19■□□□□ 0.5
RPE-208ENST00000436630 MIER1Q8N108 512 aa18.19■□□□□ 0.5
RPE-208ENST00000436630 COG3Q96JB2 828 aa18.19■□□□□ 0.5
RPE-208ENST00000436630 ARHGEF10O15013 1369 aa18.18■□□□□ 0.5
RPE-208ENST00000436630 KRT28Q7Z3Y7 464 aa18.18■□□□□ 0.5
RPE-208ENST00000436630 NLRP13Q86W25 1043 aa18.17■□□□□ 0.5
RPE-208ENST00000436630 NME9Q86XW9 330 aa18.17■□□□□ 0.5
RPE-208ENST00000436630 GGNBP2Q9H3C7 697 aa18.17■□□□□ 0.5
RPE-208ENST00000436630 SOS2Q07890 1332 aaPredicted RBP18.17■□□□□ 0.5
RPE-208ENST00000436630 PAK3O75914 559 aaPredicted RBP18.16■□□□□ 0.5
RPE-208ENST00000436630 AATKQ6ZMQ8 1374 aa18.16■□□□□ 0.5
RPE-208ENST00000436630 PHLPP1O60346 1717 aa18.15■□□□□ 0.5
RPE-208ENST00000436630 SLIT3O75094 1523 aa18.15■□□□□ 0.5
RPE-208ENST00000436630 UBAP1LF5GYI3 381 aa18.15■□□□□ 0.5
RPE-208ENST00000436630 ABTB2Q8N961 1025 aa18.15■□□□□ 0.5
RPE-208ENST00000436630 PHF23Q9BUL5 403 aaPredicted RBP18.14■□□□□ 0.49
RPE-208ENST00000436630 SMG6Q86US8 1419 aaKnown RBP18.14■□□□□ 0.49
RPE-208ENST00000436630 PHRF1Q9P1Y6 1649 aaKnown RBP18.13■□□□□ 0.49
RPE-208ENST00000436630 CRYBG1Q9Y4K1 1723 aa18.13■□□□□ 0.49
RPE-208ENST00000436630 CNGB1Q14028 1251 aaPredicted RBP18.13■□□□□ 0.49
RPE-208ENST00000436630 MAP2P11137 1827 aaKnown RBP18.13■□□□□ 0.49
RPE-208ENST00000436630 SPATA31A3Q5VYP0 1347 aa18.13■□□□□ 0.49
RPE-208ENST00000436630 COL16A1Q07092 1604 aaPredicted RBP18.12■□□□□ 0.49
RPE-208ENST00000436630 PPP2R1AP30153 589 aa18.12■□□□□ 0.49
RPE-208ENST00000436630 NLRP6P59044 892 aa18.12■□□□□ 0.49
RPE-208ENST00000436630 XPCQ01831 940 aaPredicted RBP18.11■□□□□ 0.49
RPE-208ENST00000436630 USP19O94966 1318 aa18.11■□□□□ 0.49
RPE-208ENST00000436630 NFAT5O94916 1531 aa18.11■□□□□ 0.49
RPE-208ENST00000436630 COL22A1Q8NFW1 1626 aaPredicted RBP18.11■□□□□ 0.49
RPE-208ENST00000436630 ABCA3Q99758 1704 aa18.1■□□□□ 0.49
RPE-208ENST00000436630 CDK12Q9NYV4 1490 aaPredicted RBP18.1■□□□□ 0.49
RPE-208ENST00000436630 KCNH5Q8NCM2 988 aa18.1■□□□□ 0.49
RPE-208ENST00000436630 KIF24Q5T7B8 1368 aa18.09■□□□□ 0.49
RPE-208ENST00000436630 LTN1O94822 1766 aa18.09■□□□□ 0.49
RPE-208ENST00000436630 ABCC6O95255 1503 aa18.08■□□□□ 0.49
RPE-208ENST00000436630 DDX17Q92841 729 aaKnown RBP18.08■□□□□ 0.48
RPE-208ENST00000436630 MRS2Q9HD23 443 aa18.07■□□□□ 0.48
RPE-208ENST00000436630 ZRANB1Q9UGI0 708 aa18.07■□□□□ 0.48
RPE-208ENST00000436630 RTL1A6NKG5 1358 aa18.06■□□□□ 0.48
RPE-208ENST00000436630 TNNT2P45379 298 aaPredicted RBP18.06■□□□□ 0.48
RPE-208ENST00000436630 PIP4K2BP78356 416 aa18.06■□□□□ 0.48
RPE-208ENST00000436630 LMOD2Q6P5Q4 547 aa18.06■□□□□ 0.48
RPE-208ENST00000436630 LRRC59Q96AG4 307 aaKnown RBP18.06■□□□□ 0.48
RPE-208ENST00000436630 CFAP53Q96M91 514 aa18.06■□□□□ 0.48
RPE-208ENST00000436630 SHPRHQ149N8 1683 aa18.06■□□□□ 0.48
RPE-208ENST00000436630 INSRP06213 1382 aa18.04■□□□□ 0.48
RPE-208ENST00000436630 NUTM2GQ5VZR2 741 aa18.03■□□□□ 0.48
RPE-208ENST00000436630 FLT4P35916 1363 aa18.03■□□□□ 0.48
RPE-208ENST00000436630 PNPLA6Q8IY17 1366 aa18.03■□□□□ 0.48
RPE-208ENST00000436630 COL3A1P02461 1466 aaPredicted RBP18.02■□□□□ 0.48
RPE-208ENST00000436630 MTHFSP49914 203 aa18.02■□□□□ 0.48
RPE-208ENST00000436630 PEAK1Q9H792 1746 aa18.02■□□□□ 0.48
RPE-208ENST00000436630 POLKQ9UBT6 870 aa18.02■□□□□ 0.48
RPE-208ENST00000436630 GCP02774 474 aa18■□□□□ 0.47
RPE-208ENST00000436630 CPDO75976 1380 aa18■□□□□ 0.47
RPE-208ENST00000436630 MAP3K19Q56UN5 1328 aa17.98■□□□□ 0.47
RPE-208ENST00000436630 BLMP54132 1417 aaPredicted RBP17.98■□□□□ 0.47
RPE-208ENST00000436630 FAM208AQ9UK61 1670 aaKnown RBP17.97■□□□□ 0.47
RPE-208ENST00000436630 RRS1Q15050 365 aaKnown RBP17.97■□□□□ 0.47
RPE-208ENST00000436630 EMILIN1Q9Y6C2 1016 aa17.97■□□□□ 0.47
RPE-208ENST00000436630 JCADQ9P266 1359 aa17.96■□□□□ 0.47
RPE-208ENST00000436630 SOX12O15370 315 aa17.96■□□□□ 0.47
RPE-208ENST00000436630 AMPHP49418 695 aa17.96■□□□□ 0.47
RPE-208ENST00000436630 CCDC184Q52MB2 194 aa17.96■□□□□ 0.47
RPE-208ENST00000436630 COL18A1P39060 1754 aa17.95■□□□□ 0.46
RPE-208ENST00000436630 HAP1P54257 671 aaPredicted RBP17.95■□□□□ 0.46
RPE-208ENST00000436630 WDR43Q15061 677 aaKnown RBP eCLIP17.95■□□□□ 0.46
RPE-208ENST00000436630 ARHGEF25Q86VW2 580 aa17.95■□□□□ 0.46
RPE-208ENST00000436630 PNISRQ8TF01 805 aaKnown RBP17.95■□□□□ 0.46
RPE-208ENST00000436630 NUDCQ9Y266 331 aa17.95■□□□□ 0.46
RPE-208ENST00000436630 PPM1GO15355 546 aaPredicted RBP17.94■□□□□ 0.46
RPE-208ENST00000436630 DIAPH1O60610 1272 aaKnown RBP17.94■□□□□ 0.46
RPE-208ENST00000436630 RGPD1P0DJD0 1748 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms