RNA–Protein interactions for RNA: ENST00000436564.5

COPS7B-212, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-212ENST00000436564 PPLO60437 1756 aa16.23■□□□□ 0.19
COPS7B-212ENST00000436564 YTHDC2Q9H6S0 1430 aaKnown RBP16.22■□□□□ 0.19
COPS7B-212ENST00000436564 EN1Q05925 392 aaPredicted RBP16.21■□□□□ 0.19
COPS7B-212ENST00000436564 BTG4Q9NY30 223 aa16.21■□□□□ 0.19
COPS7B-212ENST00000436564 KIF1AQ12756 1690 aa16.21■□□□□ 0.18
COPS7B-212ENST00000436564 LRP5O75197 1615 aa16.2■□□□□ 0.18
COPS7B-212ENST00000436564 SPDYE4A6NLX3 237 aa16.2■□□□□ 0.18
COPS7B-212ENST00000436564 SAFB2Q14151 953 aaKnown RBP eCLIP16.2■□□□□ 0.18
COPS7B-212ENST00000436564 PMFBP1Q8TBY8 1022 aa16.2■□□□□ 0.18
COPS7B-212ENST00000436564 PIK3C2GO75747 1445 aa16.19■□□□□ 0.18
COPS7B-212ENST00000436564 SPATA31E1Q6ZUB1 1445 aa16.19■□□□□ 0.18
COPS7B-212ENST00000436564 R3HDM1Q15032 1099 aaKnown RBP16.19■□□□□ 0.18
COPS7B-212ENST00000436564 PRAM1Q96QH2 718 aa16.18■□□□□ 0.18
COPS7B-212ENST00000436564 C14orf93Q9H972 538 aaKnown RBP16.18■□□□□ 0.18
COPS7B-212ENST00000436564 FMN2Q9NZ56 1722 aa16.18■□□□□ 0.18
COPS7B-212ENST00000436564 BRWD3Q6RI45 1802 aa16.17■□□□□ 0.18
COPS7B-212ENST00000436564 NRXN1Q9ULB1 1477 aa16.17■□□□□ 0.18
COPS7B-212ENST00000436564 DHX57Q6P158 1386 aaKnown RBP16.17■□□□□ 0.18
COPS7B-212ENST00000436564 FAM182BQ5T319 152 aa16.17■□□□□ 0.18
COPS7B-212ENST00000436564 CFAP70Q5T0N1 1121 aa16.16■□□□□ 0.18
COPS7B-212ENST00000436564 MPHOSPH9Q99550 1183 aa16.16■□□□□ 0.18
COPS7B-212ENST00000436564 POGKQ9P215 609 aa16.16■□□□□ 0.18
COPS7B-212ENST00000436564 SSUH2Q9Y2M2 353 aa16.15■□□□□ 0.18
COPS7B-212ENST00000436564 NWD2Q9ULI1 1742 aa16.14■□□□□ 0.17
COPS7B-212ENST00000436564 KNDC1Q76NI1 1749 aa16.14■□□□□ 0.17
COPS7B-212ENST00000436564 GPRASP1Q5JY77 1395 aa16.13■□□□□ 0.17
COPS7B-212ENST00000436564 PLCH1Q4KWH8 1693 aa16.13■□□□□ 0.17
COPS7B-212ENST00000436564 SPATA31A5Q5VU36 1347 aa16.13■□□□□ 0.17
COPS7B-212ENST00000436564 SPATA31A7Q8IWB4 1347 aa16.13■□□□□ 0.17
COPS7B-212ENST00000436564 EZH2Q15910 746 aaKnown RBP16.12■□□□□ 0.17
COPS7B-212ENST00000436564 ANKARQ7Z5J8 1434 aa16.11■□□□□ 0.17
COPS7B-212ENST00000436564 PAK3O75914 559 aaPredicted RBP16.1■□□□□ 0.17
COPS7B-212ENST00000436564 TRIM37O94972 964 aa16.1■□□□□ 0.17
COPS7B-212ENST00000436564 HIRIP3Q9BW71 556 aaPredicted RBP16.1■□□□□ 0.17
COPS7B-212ENST00000436564 PRDM11Q9NQV5 511 aa16.1■□□□□ 0.17
COPS7B-212ENST00000436564 DISP2A7MBM2 1401 aa16.1■□□□□ 0.17
COPS7B-212ENST00000436564 FAM196AQ6ZSG2 479 aa16.09■□□□□ 0.17
COPS7B-212ENST00000436564 ACIN1Q9UKV3 1341 aaKnown RBP16.09■□□□□ 0.17
COPS7B-212ENST00000436564 APBA3O96018 575 aa16.08■□□□□ 0.16
COPS7B-212ENST00000436564 NGDNQ8NEJ9 315 aaKnown RBP16.08■□□□□ 0.16
COPS7B-212ENST00000436564 CAMKK2Q96RR4 588 aa16.08■□□□□ 0.16
COPS7B-212ENST00000436564 TRAK1Q9UPV9 953 aa16.07■□□□□ 0.16
COPS7B-212ENST00000436564 EIF3AQ14152 1382 aaKnown RBP16.07■□□□□ 0.16
COPS7B-212ENST00000436564 IFT172Q9UG01 1749 aa16.06■□□□□ 0.16
COPS7B-212ENST00000436564 SPATA31A1Q5TZJ5 1347 aa16.06■□□□□ 0.16
COPS7B-212ENST00000436564 MINK1Q8N4C8 1332 aaPredicted RBP16.06■□□□□ 0.16
COPS7B-212ENST00000436564 YY1P25490 414 aa16.06■□□□□ 0.16
COPS7B-212ENST00000436564 STRN4Q9NRL3 753 aa16.06■□□□□ 0.16
COPS7B-212ENST00000436564 ABCA3Q99758 1704 aa16.05■□□□□ 0.16
COPS7B-212ENST00000436564 COL14A1Q05707 1796 aaKnown RBP16.05■□□□□ 0.16
COPS7B-212ENST00000436564 NRAPQ86VF7 1730 aa16.05■□□□□ 0.16
COPS7B-212ENST00000436564 PARD3Q8TEW0 1356 aa16.04■□□□□ 0.16
COPS7B-212ENST00000436564 PRR36Q9H6K5 1346 aa16.04■□□□□ 0.16
COPS7B-212ENST00000436564 WASLO00401 505 aaPredicted RBP16.04■□□□□ 0.16
COPS7B-212ENST00000436564 PDE3BQ13370 1112 aa16.04■□□□□ 0.16
COPS7B-212ENST00000436564 FKBP8Q14318 412 aa16.04■□□□□ 0.16
COPS7B-212ENST00000436564 CHRNA2Q15822 529 aa16.04■□□□□ 0.16
COPS7B-212ENST00000436564 NBPF8Q3BBV2 869 aa16.04■□□□□ 0.16
COPS7B-212ENST00000436564 NBPF14Q5TI25 921 aa16.04■□□□□ 0.16
COPS7B-212ENST00000436564 USP35Q9P2H5 1018 aa16.04■□□□□ 0.16
COPS7B-212ENST00000436564 RGPD8O14715 1765 aaPredicted RBP16.04■□□□□ 0.16
COPS7B-212ENST00000436564 KIAA0232Q92628 1395 aa16.03■□□□□ 0.16
COPS7B-212ENST00000436564 RGPD1P0DJD0 1748 aa16.03■□□□□ 0.16
COPS7B-212ENST00000436564 EVA1CP58658 441 aa16.03■□□□□ 0.16
COPS7B-212ENST00000436564 DLC1Q96QB1 1528 aa16.03■□□□□ 0.16
COPS7B-212ENST00000436564 REM2Q8IYK8 340 aaPredicted RBP16.02■□□□□ 0.16
COPS7B-212ENST00000436564 ZC3H6P61129 1189 aaKnown RBP16.01■□□□□ 0.15
COPS7B-212ENST00000436564 PPP1R1BQ9UD71 204 aaPredicted RBP16.01■□□□□ 0.15
COPS7B-212ENST00000436564 ADGRB2O60241 1585 aa16■□□□□ 0.15
COPS7B-212ENST00000436564 THSD7AQ9UPZ6 1657 aa16■□□□□ 0.15
COPS7B-212ENST00000436564 NUTM2GQ5VZR2 741 aa15.99■□□□□ 0.15
COPS7B-212ENST00000436564 TRPM3Q9HCF6 1732 aaPredicted RBP15.99■□□□□ 0.15
COPS7B-212ENST00000436564 TULP4Q9NRJ4 1543 aa15.99■□□□□ 0.15
COPS7B-212ENST00000436564 BARGINQ6ZT62 677 aa15.98■□□□□ 0.15
COPS7B-212ENST00000436564 SPDYE1Q8NFV5 336 aaPredicted RBP15.98■□□□□ 0.15
COPS7B-212ENST00000436564 SPON1Q9HCB6 807 aa15.98■□□□□ 0.15
COPS7B-212ENST00000436564 NUDT16Q96DE0 195 aaKnown RBP15.97■□□□□ 0.15
COPS7B-212ENST00000436564 KDM2AQ9Y2K7 1162 aa15.97■□□□□ 0.15
COPS7B-212ENST00000436564 ALS2Q96Q42 1657 aa15.97■□□□□ 0.15
COPS7B-212ENST00000436564 TCP11L2Q8N4U5 519 aa15.96■□□□□ 0.15
COPS7B-212ENST00000436564 TNS1Q9HBL0 1735 aaKnown RBP15.96■□□□□ 0.15
COPS7B-212ENST00000436564 KCNQ2O43526 872 aa15.95■□□□□ 0.14
COPS7B-212ENST00000436564 LARP1Q6PKG0 1096 aaKnown RBP15.95■□□□□ 0.14
COPS7B-212ENST00000436564 ADGRB1O14514 1584 aa15.95■□□□□ 0.14
COPS7B-212ENST00000436564 DCAF11Q8TEB1 546 aa15.94■□□□□ 0.14
COPS7B-212ENST00000436564 SSH2Q76I76 1423 aa15.94■□□□□ 0.14
COPS7B-212ENST00000436564 ATP7BP35670 1465 aa15.92■□□□□ 0.14
COPS7B-212ENST00000436564 ABTB2Q8N961 1025 aa15.92■□□□□ 0.14
COPS7B-212ENST00000436564 THRAP3Q9Y2W1 955 aaKnown RBP15.92■□□□□ 0.14
COPS7B-212ENST00000436564 C11orf95C9JLR9 678 aaPredicted RBP15.91■□□□□ 0.14
COPS7B-212ENST00000436564 CDK19Q9BWU1 502 aa15.91■□□□□ 0.14
COPS7B-212ENST00000436564 ACEP12821 1306 aa15.91■□□□□ 0.14
COPS7B-212ENST00000436564 NINLQ9Y2I6 1382 aa15.9■□□□□ 0.14
COPS7B-212ENST00000436564 STAC3Q96MF2 364 aa15.9■□□□□ 0.14
COPS7B-212ENST00000436564 CCDC61Q9Y6R9 512 aa15.9■□□□□ 0.14
COPS7B-212ENST00000436564 CRYBG1Q9Y4K1 1723 aa15.88■□□□□ 0.13
COPS7B-212ENST00000436564 POLR3AO14802 1390 aaPredicted RBP15.87■□□□□ 0.13
COPS7B-212ENST00000436564 CPDO75976 1380 aa15.87■□□□□ 0.13
COPS7B-212ENST00000436564 NLRP13Q86W25 1043 aa15.87■□□□□ 0.13
COPS7B-212ENST00000436564 CAMTA1Q9Y6Y1 1673 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms