RNA–Protein interactions for RNA: ENST00000436216.1

EXT1-202, Transcript of exostosin glycosyltransferase 1, humanhuman

TSL 3

Gene EXT1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-202ENST00000436216 RBM6P78332 1123 aaKnown RBP17.62■□□□□ 0.41
EXT1-202ENST00000436216 SLIT2O94813 1529 aa17.62■□□□□ 0.41
EXT1-202ENST00000436216 ABCA3Q99758 1704 aa17.61■□□□□ 0.41
EXT1-202ENST00000436216 CABP1Q9NZU7 370 aa17.61■□□□□ 0.41
EXT1-202ENST00000436216 PAK3O75914 559 aaPredicted RBP17.6■□□□□ 0.41
EXT1-202ENST00000436216 TRPC5Q9UL62 973 aaPredicted RBP17.6■□□□□ 0.41
EXT1-202ENST00000436216 ATRNO75882 1429 aa17.6■□□□□ 0.41
EXT1-202ENST00000436216 BRD4O60885 1362 aaPredicted RBP17.59■□□□□ 0.41
EXT1-202ENST00000436216 CRYBG1Q9Y4K1 1723 aa17.58■□□□□ 0.41
EXT1-202ENST00000436216 HAP1P54257 671 aaPredicted RBP17.58■□□□□ 0.4
EXT1-202ENST00000436216 UNC5CLQ8IV45 518 aa17.57■□□□□ 0.4
EXT1-202ENST00000436216 ATAD2Q6PL18 1390 aa17.56■□□□□ 0.4
EXT1-202ENST00000436216 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.56■□□□□ 0.4
EXT1-202ENST00000436216 FAM83GA6ND36 823 aa17.56■□□□□ 0.4
EXT1-202ENST00000436216 SSH2Q76I76 1423 aa17.55■□□□□ 0.4
EXT1-202ENST00000436216 PUS7Q96PZ0 661 aaKnown RBP17.55■□□□□ 0.4
EXT1-202ENST00000436216 TESK2Q96S53 571 aa17.55■□□□□ 0.4
EXT1-202ENST00000436216 USP6P35125 1406 aa17.55■□□□□ 0.4
EXT1-202ENST00000436216 PLEKHG5O94827 1062 aa17.54■□□□□ 0.4
EXT1-202ENST00000436216 ZNF692Q9BU19 519 aaPredicted RBP17.54■□□□□ 0.4
EXT1-202ENST00000436216 NWD2Q9ULI1 1742 aa17.54■□□□□ 0.4
EXT1-202ENST00000436216 RGS12O14924 1447 aa17.54■□□□□ 0.4
EXT1-202ENST00000436216 ST20-MTHFSA0A0A6YYL1 179 aa17.53■□□□□ 0.4
EXT1-202ENST00000436216 ABTB2Q8N961 1025 aa17.53■□□□□ 0.4
EXT1-202ENST00000436216 GJD4Q96KN9 370 aaPredicted RBP17.53■□□□□ 0.4
EXT1-202ENST00000436216 CPSF1Q10570 1443 aaKnown RBP17.53■□□□□ 0.4
EXT1-202ENST00000436216 USP19O94966 1318 aa17.52■□□□□ 0.4
EXT1-202ENST00000436216 SLC24A1O60721 1099 aa17.52■□□□□ 0.4
EXT1-202ENST00000436216 PLCH1Q4KWH8 1693 aa17.52■□□□□ 0.39
EXT1-202ENST00000436216 VPS72Q15906 364 aa17.51■□□□□ 0.39
EXT1-202ENST00000436216 NUTM2GQ5VZR2 741 aa17.51■□□□□ 0.39
EXT1-202ENST00000436216 CCER1Q8TC90 406 aaPredicted RBP17.51■□□□□ 0.39
EXT1-202ENST00000436216 PHRF1Q9P1Y6 1649 aaKnown RBP17.5■□□□□ 0.39
EXT1-202ENST00000436216 NLRP13Q86W25 1043 aa17.5■□□□□ 0.39
EXT1-202ENST00000436216 AKAP12Q02952 1782 aa17.5■□□□□ 0.39
EXT1-202ENST00000436216 COL14A1Q05707 1796 aaKnown RBP17.5■□□□□ 0.39
EXT1-202ENST00000436216 BTG4Q9NY30 223 aa17.48■□□□□ 0.39
EXT1-202ENST00000436216 KIAA0232Q92628 1395 aa17.48■□□□□ 0.39
EXT1-202ENST00000436216 USP47Q96K76 1375 aa17.48■□□□□ 0.39
EXT1-202ENST00000436216 GLI3P10071 1580 aa17.48■□□□□ 0.39
EXT1-202ENST00000436216 TTC21BQ7Z4L5 1316 aa17.47■□□□□ 0.39
EXT1-202ENST00000436216 NRAPQ86VF7 1730 aa17.47■□□□□ 0.39
EXT1-202ENST00000436216 ONECUT3O60422 494 aaPredicted RBP17.47■□□□□ 0.39
EXT1-202ENST00000436216 GCP02774 474 aa17.47■□□□□ 0.39
EXT1-202ENST00000436216 PRDM11Q9NQV5 511 aa17.47■□□□□ 0.39
EXT1-202ENST00000436216 CPDO75976 1380 aa17.47■□□□□ 0.39
EXT1-202ENST00000436216 CD163L1Q9NR16 1453 aa17.47■□□□□ 0.39
EXT1-202ENST00000436216 NRKQ7Z2Y5 1582 aa17.46■□□□□ 0.39
EXT1-202ENST00000436216 ZC3H6P61129 1189 aaKnown RBP17.46■□□□□ 0.39
EXT1-202ENST00000436216 UPF1Q92900 1129 aaKnown RBP eCLIP17.46■□□□□ 0.39
EXT1-202ENST00000436216 TTC21AQ8NDW8 1320 aa17.46■□□□□ 0.38
EXT1-202ENST00000436216 KTN1Q86UP2 1357 aaKnown RBP17.45■□□□□ 0.38
EXT1-202ENST00000436216 NLRP6P59044 892 aa17.45■□□□□ 0.38
EXT1-202ENST00000436216 SLC12A5Q9H2X9 1139 aa17.45■□□□□ 0.38
EXT1-202ENST00000436216 PIK3C2AO00443 1686 aa17.45■□□□□ 0.38
EXT1-202ENST00000436216 EP400Q96L91 3159 aa17.44■□□□□ 0.38
EXT1-202ENST00000436216 SLIT3O75094 1523 aa17.44■□□□□ 0.38
EXT1-202ENST00000436216 MON2Q7Z3U7 1717 aa17.44■□□□□ 0.38
EXT1-202ENST00000436216 CHRNA2Q15822 529 aa17.43■□□□□ 0.38
EXT1-202ENST00000436216 NINLQ9Y2I6 1382 aa17.42■□□□□ 0.38
EXT1-202ENST00000436216 TMC1Q8TDI8 760 aa17.42■□□□□ 0.38
EXT1-202ENST00000436216 TMF1P82094 1093 aa17.41■□□□□ 0.38
EXT1-202ENST00000436216 HDGFL2Q7Z4V5 671 aaPredicted RBP17.41■□□□□ 0.38
EXT1-202ENST00000436216 TERF2IPQ9NYB0 399 aa17.41■□□□□ 0.38
EXT1-202ENST00000436216 SPATA31A5Q5VU36 1347 aa17.41■□□□□ 0.38
EXT1-202ENST00000436216 SPATA31A7Q8IWB4 1347 aa17.41■□□□□ 0.38
EXT1-202ENST00000436216 LMO7Q8WWI1 1683 aa17.4■□□□□ 0.38
EXT1-202ENST00000436216 CAMTA1Q9Y6Y1 1673 aa17.4■□□□□ 0.38
EXT1-202ENST00000436216 CCDC9Q9Y3X0 531 aaKnown RBP17.4■□□□□ 0.38
EXT1-202ENST00000436216 A0A1W2PP64 1363 aa17.4■□□□□ 0.38
EXT1-202ENST00000436216 USP31Q70CQ4 1352 aa17.4■□□□□ 0.38
EXT1-202ENST00000436216 EDC4Q6P2E9 1401 aaKnown RBP17.39■□□□□ 0.38
EXT1-202ENST00000436216 SEPT12Q8IYM1 358 aa17.39■□□□□ 0.37
EXT1-202ENST00000436216 KCNH5Q8NCM2 988 aa17.38■□□□□ 0.37
EXT1-202ENST00000436216 AATKQ6ZMQ8 1374 aa17.38■□□□□ 0.37
EXT1-202ENST00000436216 USP54Q70EL1 1684 aa17.37■□□□□ 0.37
EXT1-202ENST00000436216 SPATA31A1Q5TZJ5 1347 aa17.37■□□□□ 0.37
EXT1-202ENST00000436216 FAM98CQ17RN3 349 aaKnown RBP17.36■□□□□ 0.37
EXT1-202ENST00000436216 CDCA8Q53HL2 280 aa17.36■□□□□ 0.37
EXT1-202ENST00000436216 ARHGEF25Q86VW2 580 aa17.36■□□□□ 0.37
EXT1-202ENST00000436216 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.36■□□□□ 0.371e-6■■■□□ 16.6
EXT1-202ENST00000436216 BRWD3Q6RI45 1802 aa17.35■□□□□ 0.37
EXT1-202ENST00000436216 EVA1CP58658 441 aa17.35■□□□□ 0.37
EXT1-202ENST00000436216 NME9Q86XW9 330 aa17.35■□□□□ 0.37
EXT1-202ENST00000436216 ZRANB1Q9UGI0 708 aa17.35■□□□□ 0.37
EXT1-202ENST00000436216 NFAT5O94916 1531 aa17.35■□□□□ 0.37
EXT1-202ENST00000436216 COL18A1P39060 1754 aa17.35■□□□□ 0.37
EXT1-202ENST00000436216 ANKRD36BQ8N2N9 1353 aa17.34■□□□□ 0.37
EXT1-202ENST00000436216 STRN4Q9NRL3 753 aa17.34■□□□□ 0.37
EXT1-202ENST00000436216 COL5A2P05997 1499 aaPredicted RBP17.33■□□□□ 0.37
EXT1-202ENST00000436216 LARP1Q6PKG0 1096 aaKnown RBP17.33■□□□□ 0.36
EXT1-202ENST00000436216 BARGINQ6ZT62 677 aa17.32■□□□□ 0.36
EXT1-202ENST00000436216 KRT27Q7Z3Y8 459 aa17.32■□□□□ 0.36
EXT1-202ENST00000436216 AXIN2Q9Y2T1 843 aa17.32■□□□□ 0.36
EXT1-202ENST00000436216 THSD7AQ9UPZ6 1657 aa17.32■□□□□ 0.36
EXT1-202ENST00000436216 OVOS2A0A0J9YW53 1432 aa17.31■□□□□ 0.36
EXT1-202ENST00000436216 OVOS2Q6IE36 1432 aa17.31■□□□□ 0.36
EXT1-202ENST00000436216 EIF4G2P78344 907 aaKnown RBP eCLIP17.31■□□□□ 0.36
EXT1-202ENST00000436216 CCDC125Q86Z20 511 aa17.31■□□□□ 0.36
EXT1-202ENST00000436216 THRAP3Q9Y2W1 955 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms