RNA–Protein interactions for RNA: ENST00000435606.1

LDLRAD4-204, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best)

Gene LDLRAD4, Length 8,032 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-204ENST00000435606 MPHOSPH8Q99549 860 aa12.78□□□□□ -0.36
LDLRAD4-204ENST00000435606 IGF1RP08069 1367 aa12.78□□□□□ -0.36
LDLRAD4-204ENST00000435606 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.78□□□□□ -0.36
LDLRAD4-204ENST00000435606 CNTLNQ9NXG0 1405 aa12.78□□□□□ -0.36
LDLRAD4-204ENST00000435606 HOMER1Q86YM7 354 aa12.77□□□□□ -0.36
LDLRAD4-204ENST00000435606 ARID3AQ99856 593 aa12.77□□□□□ -0.37
LDLRAD4-204ENST00000435606 FOSBP53539 338 aa12.77□□□□□ -0.37
LDLRAD4-204ENST00000435606 NUCB2P80303 420 aa12.77□□□□□ -0.37
LDLRAD4-204ENST00000435606 DNAJC2Q99543 621 aaKnown RBP12.77□□□□□ -0.37
LDLRAD4-204ENST00000435606 AFAP1Q8N556 730 aa12.77□□□□□ -0.37
LDLRAD4-204ENST00000435606 ZSCAN25Q6NSZ9 544 aa12.76□□□□□ -0.37
LDLRAD4-204ENST00000435606 MTHFSP49914 203 aa12.76□□□□□ -0.37
LDLRAD4-204ENST00000435606 SYCP1Q15431 976 aa12.76□□□□□ -0.37
LDLRAD4-204ENST00000435606 MYO6Q9UM54 1294 aa12.76□□□□□ -0.37
LDLRAD4-204ENST00000435606 KRT18P05783 430 aaKnown RBP12.76□□□□□ -0.37
LDLRAD4-204ENST00000435606 SURF6O75683 361 aaKnown RBP12.75□□□□□ -0.37
LDLRAD4-204ENST00000435606 RUFY1Q96T51 708 aa12.75□□□□□ -0.37
LDLRAD4-204ENST00000435606 CASKIN1Q8WXD9 1431 aa12.75□□□□□ -0.37
LDLRAD4-204ENST00000435606 CCDC57Q2TAC2 916 aa12.75□□□□□ -0.37
LDLRAD4-204ENST00000435606 RRP12Q5JTH9 1297 aaKnown RBP12.75□□□□□ -0.37
LDLRAD4-204ENST00000435606 CDK19Q9BWU1 502 aa12.75□□□□□ -0.37
LDLRAD4-204ENST00000435606 ZNF644Q9H582 1327 aaPredicted RBP12.75□□□□□ -0.37
LDLRAD4-204ENST00000435606 CDC45O75419 566 aa12.74□□□□□ -0.37
LDLRAD4-204ENST00000435606 ZNF592Q92610 1267 aa12.74□□□□□ -0.37
LDLRAD4-204ENST00000435606 AK7Q96M32 723 aa12.74□□□□□ -0.37
LDLRAD4-204ENST00000435606 HECW1Q76N89 1606 aa12.74□□□□□ -0.37
LDLRAD4-204ENST00000435606 GNAI2P04899 355 aa12.74□□□□□ -0.37
LDLRAD4-204ENST00000435606 MAGEC2Q9UBF1 373 aaPredicted RBP12.74□□□□□ -0.37
LDLRAD4-204ENST00000435606 ZNF652Q9Y2D9 606 aa12.74□□□□□ -0.37
LDLRAD4-204ENST00000435606 HFM1A2PYH4 1435 aa12.74□□□□□ -0.37
LDLRAD4-204ENST00000435606 RTEL1-TNFRSF6BF6WH68 1400 aa12.74□□□□□ -0.37
LDLRAD4-204ENST00000435606 NCOA2Q15596 1464 aa12.74□□□□□ -0.37
LDLRAD4-204ENST00000435606 ZNF530Q6P9A1 599 aaPredicted RBP12.74□□□□□ -0.37
LDLRAD4-204ENST00000435606 TMOD2Q9NZR1 351 aa12.74□□□□□ -0.37
LDLRAD4-204ENST00000435606 PDE4AP27815 886 aa12.73□□□□□ -0.37
LDLRAD4-204ENST00000435606 MPHOSPH10O00566 681 aaKnown RBP12.73□□□□□ -0.37
LDLRAD4-204ENST00000435606 EXOC6Q8TAG9 804 aa12.73□□□□□ -0.37
LDLRAD4-204ENST00000435606 HDGFL1Q5TGJ6 251 aa12.73□□□□□ -0.37
LDLRAD4-204ENST00000435606 LNPKQ9C0E8 428 aa12.73□□□□□ -0.37
LDLRAD4-204ENST00000435606 NCAPD3P42695 1498 aa12.72□□□□□ -0.37
LDLRAD4-204ENST00000435606 STARD3NLO95772 234 aa12.72□□□□□ -0.37
LDLRAD4-204ENST00000435606 PIP4K2AP48426 406 aaPredicted RBP12.72□□□□□ -0.37
LDLRAD4-204ENST00000435606 ZSCAN29Q8IWY8 852 aaPredicted RBP12.72□□□□□ -0.37
LDLRAD4-204ENST00000435606 LRRC9Q6ZRR7 1453 aa12.72□□□□□ -0.37
LDLRAD4-204ENST00000435606 PRKAR2BP31323 418 aa12.72□□□□□ -0.37
LDLRAD4-204ENST00000435606 CCT4P50991 539 aaKnown RBP12.72□□□□□ -0.37
LDLRAD4-204ENST00000435606 PDCP20941 246 aa12.72□□□□□ -0.37
LDLRAD4-204ENST00000435606 TRIM21P19474 475 aaKnown RBP12.71□□□□□ -0.37
LDLRAD4-204ENST00000435606 SOGA3Q5TF21 947 aa12.71□□□□□ -0.37
LDLRAD4-204ENST00000435606 KIF7Q2M1P5 1343 aa12.71□□□□□ -0.37
LDLRAD4-204ENST00000435606 SDF4Q9BRK5 362 aa12.71□□□□□ -0.37
LDLRAD4-204ENST00000435606 ACBD3Q9H3P7 528 aa12.71□□□□□ -0.37
LDLRAD4-204ENST00000435606 TRIM22Q8IYM9 498 aa12.71□□□□□ -0.38
LDLRAD4-204ENST00000435606 RPGRIP1LQ68CZ1 1315 aa12.71□□□□□ -0.38
LDLRAD4-204ENST00000435606 RUSC2Q8N2Y8 1516 aa12.7□□□□□ -0.38
LDLRAD4-204ENST00000435606 CHMP5Q9NZZ3 219 aa12.7□□□□□ -0.38
LDLRAD4-204ENST00000435606 C9orf84Q5VXU9 1444 aa12.7□□□□□ -0.38
LDLRAD4-204ENST00000435606 CFAP70Q5T0N1 1121 aa12.7□□□□□ -0.38
LDLRAD4-204ENST00000435606 KCNH5Q8NCM2 988 aa12.7□□□□□ -0.38
LDLRAD4-204ENST00000435606 ZNF396Q96N95 335 aaPredicted RBP12.7□□□□□ -0.38
LDLRAD4-204ENST00000435606 IGHMBP2P38935 993 aaKnown RBP12.7□□□□□ -0.38
LDLRAD4-204ENST00000435606 EHBP1L1Q8N3D4 1523 aa12.7□□□□□ -0.38
LDLRAD4-204ENST00000435606 CCDC69A6NI79 296 aa12.7□□□□□ -0.38
LDLRAD4-204ENST00000435606 ZPR1O75312 459 aa12.7□□□□□ -0.38
LDLRAD4-204ENST00000435606 FILIP1LQ4L180 1135 aa12.7□□□□□ -0.38
LDLRAD4-204ENST00000435606 EFCAB5A4FU69 1503 aa12.7□□□□□ -0.38
LDLRAD4-204ENST00000435606 TWISTNBQ3B726 338 aaPredicted RBP12.7□□□□□ -0.38
LDLRAD4-204ENST00000435606 DMRT2Q9Y5R5 561 aa12.69□□□□□ -0.38
LDLRAD4-204ENST00000435606 SMARCE1Q969G3 411 aa12.69□□□□□ -0.38
LDLRAD4-204ENST00000435606 MYL6BP14649 208 aa12.69□□□□□ -0.38
LDLRAD4-204ENST00000435606 DNAI2Q9GZS0 605 aa12.69□□□□□ -0.38
LDLRAD4-204ENST00000435606 CCDC7Q96M83 1385 aa12.69□□□□□ -0.38
LDLRAD4-204ENST00000435606 MCM2P49736 904 aa12.69□□□□□ -0.38
LDLRAD4-204ENST00000435606 JMYQ8N9B5 988 aa12.69□□□□□ -0.38
LDLRAD4-204ENST00000435606 BTBD11A6QL63 1104 aa12.69□□□□□ -0.38
LDLRAD4-204ENST00000435606 SULT6B1Q6IMI4 303 aa12.69□□□□□ -0.38
LDLRAD4-204ENST00000435606 DESP17661 470 aa12.68□□□□□ -0.38
LDLRAD4-204ENST00000435606 TEX35Q5T0J7 233 aa12.68□□□□□ -0.38
LDLRAD4-204ENST00000435606 ZNF287Q9HBT7 754 aa12.68□□□□□ -0.38
LDLRAD4-204ENST00000435606 BRD4O60885 1362 aaPredicted RBP12.68□□□□□ -0.38
LDLRAD4-204ENST00000435606 ERICH3Q5RHP9 1530 aa12.68□□□□□ -0.38
LDLRAD4-204ENST00000435606 LETM1O95202 739 aaPredicted RBP12.68□□□□□ -0.38
LDLRAD4-204ENST00000435606 ANKRD1Q15327 319 aa12.68□□□□□ -0.38
LDLRAD4-204ENST00000435606 EPRSP07814 1512 aaKnown RBP12.68□□□□□ -0.38
LDLRAD4-204ENST00000435606 SUPT6HQ7KZ85 1726 aaKnown RBP12.68□□□□□ -0.38
LDLRAD4-204ENST00000435606 STIM1Q13586 685 aa12.68□□□□□ -0.38
LDLRAD4-204ENST00000435606 KINO60870 393 aaKnown RBP12.67□□□□□ -0.38
LDLRAD4-204ENST00000435606 CC2D2AQ9P2K1 1620 aa12.67□□□□□ -0.38
LDLRAD4-204ENST00000435606 PDILTQ8N807 584 aa12.67□□□□□ -0.38
LDLRAD4-204ENST00000435606 CAGE1Q8TC20 777 aa12.67□□□□□ -0.38
LDLRAD4-204ENST00000435606 PATL2C9JE40 543 aaKnown RBP12.67□□□□□ -0.38
LDLRAD4-204ENST00000435606 C22orf23Q9BZE7 217 aa12.67□□□□□ -0.38
LDLRAD4-204ENST00000435606 CABP1Q9NZU7 370 aa12.67□□□□□ -0.38
LDLRAD4-204ENST00000435606 KDM4AO75164 1064 aa12.66□□□□□ -0.38
LDLRAD4-204ENST00000435606 PDCL3Q9H2J4 239 aa12.66□□□□□ -0.38
LDLRAD4-204ENST00000435606 SLC4A2P04920 1241 aa12.66□□□□□ -0.38
LDLRAD4-204ENST00000435606 ATAD2Q6PL18 1390 aa12.66□□□□□ -0.38
LDLRAD4-204ENST00000435606 TCP11L2Q8N4U5 519 aa12.66□□□□□ -0.38
LDLRAD4-204ENST00000435606 LUC7LQ9NQ29 371 aaKnown RBP12.66□□□□□ -0.38
LDLRAD4-204ENST00000435606 SLC26A8Q96RN1 970 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms